Wall clock time and date at job start Sun Mar 7 2021 09:37:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50696 * 1 3 3 C 1.37879 * 126.45807 * 2 1 4 4 C 1.46679 * 126.22620 * 359.97438 * 3 2 1 5 5 O 1.21693 * 120.00434 * 359.97438 * 4 3 2 6 6 N 1.34777 * 119.99308 * 180.27256 * 4 3 2 7 7 C 1.46505 * 119.99724 * 179.72494 * 6 4 3 8 8 H 1.08994 * 109.47052 * 35.00246 * 7 6 4 9 9 C 1.52995 * 109.47024 * 155.00353 * 7 6 4 10 10 C 1.53002 * 109.47434 * 59.99779 * 9 7 6 11 11 C 1.53001 * 109.46843 * 60.00204 * 10 9 7 12 12 H 1.09003 * 109.47371 * 59.99947 * 11 10 9 13 13 C 1.53008 * 109.47145 * 180.02562 * 11 10 9 14 14 C 1.52999 * 109.47134 * 179.97438 * 13 11 10 15 15 C 1.52999 * 109.46936 * 300.00068 * 13 11 10 16 16 C 1.53006 * 109.47065 * 299.99786 * 11 10 9 17 17 C 1.52998 * 109.46500 * 60.00240 * 16 11 10 18 18 N 1.37643 * 107.53670 * 180.24263 * 3 2 1 19 19 C 1.35537 * 108.64420 * 359.56761 * 18 3 2 20 20 C 1.50698 * 125.56757 * 180.16732 * 19 18 3 21 21 O 1.42907 * 109.47157 * 65.28837 * 20 19 18 22 22 Si 1.86295 * 109.47539 * 185.28881 * 20 19 18 23 23 C 1.35455 * 108.87112 * 0.43605 * 19 18 3 24 24 H 1.08998 * 109.46963 * 90.00266 * 1 2 3 25 25 H 1.09005 * 109.46825 * 209.99972 * 1 2 3 26 26 H 1.08991 * 109.47334 * 329.99818 * 1 2 3 27 27 H 0.97000 * 120.00483 * 359.72926 * 6 4 3 28 28 H 1.08998 * 109.47373 * 179.97438 * 9 7 6 29 29 H 1.08999 * 109.47405 * 299.99602 * 9 7 6 30 30 H 1.08998 * 109.47575 * 179.97438 * 10 9 7 31 31 H 1.08995 * 109.47402 * 299.99872 * 10 9 7 32 32 H 1.08998 * 109.46739 * 59.99960 * 13 11 10 33 33 H 1.08994 * 109.47115 * 179.97438 * 14 13 11 34 34 H 1.08998 * 109.46936 * 300.00164 * 14 13 11 35 35 H 1.09003 * 109.47063 * 60.00044 * 14 13 11 36 36 H 1.09001 * 109.47276 * 59.99817 * 15 13 11 37 37 H 1.08994 * 109.47028 * 180.02562 * 15 13 11 38 38 H 1.09003 * 109.46911 * 299.99742 * 15 13 11 39 39 H 1.09001 * 109.47081 * 180.02562 * 16 11 10 40 40 H 1.08995 * 109.46914 * 300.00168 * 16 11 10 41 41 H 1.09002 * 109.46585 * 179.97438 * 17 16 11 42 42 H 1.08995 * 109.47596 * 60.00345 * 17 16 11 43 43 H 0.96996 * 125.68412 * 179.70096 * 18 3 2 44 44 H 1.09001 * 109.47486 * 305.29072 * 20 19 18 45 45 H 0.96699 * 113.99909 * 179.97438 * 21 20 19 46 46 H 1.48500 * 110.00346 * 178.67870 * 22 20 19 47 47 H 1.48498 * 109.99968 * 300.00481 * 22 20 19 48 48 H 1.07999 * 126.06786 * 179.70948 * 23 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3263 1.1090 0.0000 4 6 1.8897 2.5093 -0.0005 5 8 0.7025 2.7766 -0.0015 6 7 2.8036 3.4999 -0.0060 7 6 2.3676 4.8986 -0.0126 8 1 1.4563 4.9978 0.5769 9 6 3.4644 5.7775 0.5918 10 6 4.7437 5.6381 -0.2357 11 6 4.4709 6.0805 -1.6747 12 1 4.1465 7.1211 -1.6797 13 6 5.7501 5.9405 -2.5025 14 6 5.4771 6.3823 -3.9417 15 6 6.8473 6.8190 -1.8981 16 6 3.3741 5.2015 -2.2793 17 6 2.0949 5.3410 -1.4517 18 7 3.6283 0.6626 -0.0056 19 6 3.6218 -0.6927 0.0007 20 6 4.8434 -1.5752 0.0013 21 8 5.5630 -1.3919 1.2223 22 14 4.3223 -3.3573 -0.1509 23 6 2.3380 -1.1247 0.0005 24 1 -0.3633 0.0000 -1.0277 25 1 -0.3633 -0.8900 0.5139 26 1 -0.3633 0.8899 0.5138 27 1 3.7499 3.2869 -0.0056 28 1 3.1403 6.8181 0.5865 29 1 3.6587 5.4624 1.6170 30 1 5.5250 6.2646 0.1947 31 1 5.0681 4.5975 -0.2308 32 1 6.0740 4.8998 -2.4975 33 1 6.3885 6.2831 -4.5312 34 1 4.6956 5.7561 -4.3719 35 1 5.1530 7.4230 -3.9470 36 1 7.0416 6.5039 -0.8729 37 1 7.7584 6.7197 -2.4881 38 1 6.5233 7.8598 -1.9031 39 1 3.1801 5.5164 -3.3047 40 1 3.6985 4.1610 -2.2744 41 1 1.3134 4.7151 -1.8826 42 1 1.7705 6.3815 -1.4566 43 1 4.4190 1.2244 -0.0109 44 1 5.4832 -1.3106 -0.8407 45 1 6.3631 -1.9304 1.2919 46 1 5.5194 -4.2355 -0.1836 47 1 3.4496 -3.7305 0.9911 48 1 2.0137 -2.1548 0.0003 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16623128_13940406.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:37:45 Heat of formation + Delta-G solvation = -46.825346 kcal Electronic energy + Delta-G solvation = -26623.644256 eV Core-core repulsion = 23065.608699 eV Total energy + Delta-G solvation = -3558.035558 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 307.193 amu Computer time = 0.99 seconds Orbital eigenvalues (eV) -42.62447 -41.11881 -39.47310 -37.84395 -36.69850 -34.16506 -33.36141 -31.96602 -31.76921 -29.84612 -28.22611 -28.03251 -26.79600 -24.09052 -23.41447 -22.84499 -21.57672 -20.88680 -20.46281 -20.20969 -19.50721 -18.64362 -17.14600 -16.95425 -16.67494 -16.33652 -15.90716 -15.53323 -15.23625 -15.16651 -14.87794 -14.81256 -14.62097 -14.28495 -14.23558 -14.12134 -13.97026 -13.63017 -13.41317 -13.32615 -13.13159 -13.10147 -13.07185 -12.63227 -12.48763 -12.27228 -12.08931 -12.05424 -11.99373 -11.73102 -11.34863 -11.11984 -11.01283 -10.85779 -10.62831 -10.17914 -9.84448 -9.19876 -4.84858 0.29171 1.20357 1.50092 1.64318 1.94837 2.03907 2.18420 2.26139 3.25059 3.60804 3.64952 3.72432 3.77377 3.82354 4.01112 4.08975 4.11742 4.14067 4.23399 4.29482 4.36188 4.40558 4.51478 4.55362 4.61416 4.64881 4.69380 4.75300 4.80752 4.80923 4.89928 4.95595 5.00581 5.02507 5.07818 5.11948 5.14064 5.14815 5.19026 5.27867 5.29516 5.34313 5.36998 5.48277 5.53734 5.59435 5.63836 5.83415 6.29248 6.46476 6.53232 7.08459 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.089 4.089 2 C -0.086 4.086 3 C -0.069 4.069 4 C 0.588 3.412 5 O -0.561 6.561 6 N -0.710 5.710 7 C 0.148 3.852 8 H 0.070 0.930 9 C -0.122 4.122 10 C -0.114 4.114 11 C -0.077 4.077 12 H 0.071 0.929 13 C -0.088 4.088 14 C -0.152 4.152 15 C -0.150 4.150 16 C -0.108 4.108 17 C -0.127 4.127 18 N -0.514 5.514 19 C 0.073 3.927 20 C -0.065 4.065 21 O -0.561 6.561 22 Si 0.786 3.214 23 C -0.210 4.210 24 H 0.072 0.928 25 H 0.076 0.924 26 H 0.060 0.940 27 H 0.403 0.597 28 H 0.087 0.913 29 H 0.072 0.928 30 H 0.079 0.921 31 H 0.062 0.938 32 H 0.068 0.932 33 H 0.052 0.948 34 H 0.055 0.945 35 H 0.052 0.948 36 H 0.063 0.937 37 H 0.051 0.949 38 H 0.052 0.948 39 H 0.064 0.936 40 H 0.056 0.944 41 H 0.045 0.955 42 H 0.079 0.921 43 H 0.426 0.574 44 H 0.106 0.894 45 H 0.401 0.599 46 H -0.278 1.278 47 H -0.299 1.299 48 H 0.162 0.838 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.300 -0.387 -2.849 6.924 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.146 4.146 2 C -0.095 4.095 3 C -0.183 4.183 4 C 0.376 3.624 5 O -0.440 6.440 6 N -0.362 5.362 7 C 0.044 3.956 8 H 0.088 0.912 9 C -0.160 4.160 10 C -0.151 4.151 11 C -0.095 4.095 12 H 0.089 0.911 13 C -0.107 4.107 14 C -0.209 4.209 15 C -0.207 4.207 16 C -0.145 4.145 17 C -0.165 4.165 18 N -0.112 5.112 19 C -0.045 4.045 20 C -0.174 4.174 21 O -0.371 6.371 22 Si 0.689 3.311 23 C -0.234 4.234 24 H 0.091 0.909 25 H 0.095 0.905 26 H 0.079 0.921 27 H 0.240 0.760 28 H 0.106 0.894 29 H 0.090 0.910 30 H 0.098 0.902 31 H 0.081 0.919 32 H 0.087 0.913 33 H 0.071 0.929 34 H 0.074 0.926 35 H 0.071 0.929 36 H 0.082 0.918 37 H 0.070 0.930 38 H 0.071 0.929 39 H 0.083 0.917 40 H 0.075 0.925 41 H 0.064 0.936 42 H 0.098 0.902 43 H 0.266 0.734 44 H 0.124 0.876 45 H 0.252 0.748 46 H -0.204 1.204 47 H -0.226 1.226 48 H 0.180 0.820 Dipole moment (debyes) X Y Z Total from point charges 5.130 -0.374 -2.378 5.667 hybrid contribution 1.561 0.417 0.740 1.777 sum 6.691 0.043 -1.638 6.889 Atomic orbital electron populations 1.20324 0.89018 1.02684 1.02548 1.20155 0.96396 0.91163 1.01797 1.20187 0.84336 0.93324 1.20420 1.17173 0.85710 0.83614 0.75880 1.90807 1.17488 1.83718 1.52007 1.45903 1.09356 1.06006 1.74914 1.20972 0.98272 0.79538 0.96816 0.91188 1.21809 0.94529 1.00311 0.99320 1.21649 0.97125 1.01723 0.94649 1.21184 0.94259 0.99736 0.94357 0.91070 1.21103 0.94906 0.99904 0.94749 1.21911 1.01470 1.01312 0.96205 1.21904 0.98037 0.99708 1.01081 1.21548 0.94232 0.99793 0.98950 1.21866 0.97988 1.01765 0.94924 1.41776 1.06860 1.06644 1.55880 1.20135 0.95594 0.82805 1.05993 1.24733 0.92755 1.10032 0.89852 1.86538 1.43236 1.68908 1.38467 0.93422 0.80067 0.70234 0.87398 1.20781 0.90946 0.99524 1.12181 0.90930 0.90521 0.92117 0.76001 0.89397 0.90958 0.90240 0.91892 0.91345 0.92879 0.92569 0.92878 0.91836 0.92995 0.92880 0.91728 0.92527 0.93608 0.90234 0.73450 0.87622 0.74776 1.20399 1.22646 0.82020 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.61 9.83 71.23 0.70 0.09 16 2 C -0.09 -0.64 6.21 -19.56 -0.12 -0.76 16 3 C -0.07 -0.43 7.06 40.35 0.28 -0.15 16 4 C 0.59 4.62 7.75 86.45 0.67 5.29 16 5 O -0.56 -8.46 14.46 -4.33 -0.06 -8.52 16 6 N -0.71 -0.60 4.23 -446.50 -1.89 -2.49 16 7 C 0.15 0.10 2.78 44.99 0.13 0.23 16 8 H 0.07 0.37 7.58 -2.39 -0.02 0.35 16 9 C -0.12 0.49 5.61 30.59 0.17 0.67 16 10 C -0.11 0.67 4.68 30.60 0.14 0.81 16 11 C -0.08 0.33 1.78 -10.79 -0.02 0.31 16 12 H 0.07 -0.24 8.14 -2.39 -0.02 -0.25 16 13 C -0.09 0.36 2.50 -10.79 -0.03 0.33 16 14 C -0.15 0.41 8.84 71.98 0.64 1.05 16 15 C -0.15 0.63 8.84 71.98 0.64 1.26 16 16 C -0.11 0.21 4.69 30.60 0.14 0.35 16 17 C -0.13 -0.11 5.60 30.59 0.17 0.06 16 18 N -0.51 -0.33 5.99 -171.93 -1.03 -1.36 16 19 C 0.07 0.10 6.50 41.34 0.27 0.36 16 20 C -0.07 0.25 3.07 71.24 0.22 0.47 16 21 O -0.56 0.90 12.86 -148.98 -1.92 -1.01 16 22 Si 0.79 -3.27 30.56 68.60 2.10 -1.17 16 23 C -0.21 -0.78 9.27 22.01 0.20 -0.57 16 24 H 0.07 0.41 8.14 -2.39 -0.02 0.39 16 25 H 0.08 0.27 8.14 -2.38 -0.02 0.25 16 26 H 0.06 0.67 6.49 -2.39 -0.02 0.66 16 27 H 0.40 -1.67 6.00 -92.71 -0.56 -2.22 16 28 H 0.09 -0.42 8.14 -2.39 -0.02 -0.44 16 29 H 0.07 -0.29 8.14 -2.39 -0.02 -0.31 16 30 H 0.08 -0.52 6.43 -2.39 -0.02 -0.53 16 31 H 0.06 -0.45 6.51 -2.39 -0.02 -0.47 16 32 H 0.07 -0.29 8.14 -2.39 -0.02 -0.30 16 33 H 0.05 -0.13 8.14 -2.39 -0.02 -0.15 16 34 H 0.06 -0.12 6.43 -2.39 -0.02 -0.14 16 35 H 0.05 -0.11 8.14 -2.39 -0.02 -0.13 16 36 H 0.06 -0.33 6.43 -2.39 -0.02 -0.35 16 37 H 0.05 -0.18 8.14 -2.39 -0.02 -0.20 16 38 H 0.05 -0.18 8.14 -2.39 -0.02 -0.20 16 39 H 0.06 -0.07 6.43 -2.39 -0.02 -0.08 16 40 H 0.06 -0.07 7.60 -2.39 -0.02 -0.09 16 41 H 0.05 0.28 8.14 -2.39 -0.02 0.26 16 42 H 0.08 -0.04 8.14 -2.39 -0.02 -0.06 16 43 H 0.43 -2.11 8.19 -92.71 -0.76 -2.87 16 44 H 0.11 -0.97 7.96 -2.39 -0.02 -0.99 16 45 H 0.40 -3.91 8.74 -74.06 -0.65 -4.56 16 46 H -0.28 0.29 7.11 99.48 0.71 1.00 16 47 H -0.30 -1.26 7.11 99.48 0.71 -0.55 16 48 H 0.16 0.00 6.19 -2.91 -0.02 -0.02 16 Total: 0.00 -17.21 365.99 0.46 -16.75 By element: Atomic # 1 Polarization: -11.06 SS G_CDS: -0.95 Total: -12.01 kcal Atomic # 6 Polarization: 5.61 SS G_CDS: 4.21 Total: 9.81 kcal Atomic # 7 Polarization: -0.93 SS G_CDS: -2.92 Total: -3.85 kcal Atomic # 8 Polarization: -7.55 SS G_CDS: -1.98 Total: -9.53 kcal Atomic # 14 Polarization: -3.27 SS G_CDS: 2.10 Total: -1.17 kcal Total: -17.21 0.46 -16.75 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16623128_13940406.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -30.076 kcal (2) G-P(sol) polarization free energy of solvation -17.208 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -47.284 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.459 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.749 kcal (6) G-S(sol) free energy of system = (1) + (5) -46.825 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds