Wall clock time and date at job start Sun Mar 7 2021 09:40:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.36766 * 125.80661 * 2 1 4 4 C 1.47266 * 126.94255 * 359.97438 * 3 2 1 5 5 O 1.21633 * 119.99688 * 359.97438 * 4 3 2 6 6 N 1.34776 * 119.99915 * 179.97438 * 4 3 2 7 7 C 1.46506 * 119.99602 * 180.02562 * 6 4 3 8 8 H 1.09000 * 109.47250 * 325.00029 * 7 6 4 9 9 C 1.52997 * 109.47125 * 85.00039 * 7 6 4 10 10 C 1.52995 * 109.46974 * 59.99615 * 9 7 6 11 11 C 1.53000 * 109.47093 * 60.00221 * 10 9 7 12 12 H 1.09002 * 109.47274 * 59.99838 * 11 10 9 13 13 C 1.53002 * 109.47240 * 179.97438 * 11 10 9 14 14 C 1.53003 * 109.47191 * 179.97438 * 13 11 10 15 15 C 1.52997 * 109.47401 * 300.00131 * 13 11 10 16 16 C 1.52997 * 109.47030 * 299.99744 * 11 10 9 17 17 C 1.53001 * 109.47274 * 60.00283 * 16 11 10 18 18 C 1.46692 * 106.11671 * 179.97438 * 3 2 1 19 19 C 1.34482 * 106.33230 * 0.24101 * 18 3 2 20 20 C 1.50702 * 125.57233 * 179.73667 * 19 18 3 21 21 O 1.42892 * 109.46950 * 64.99907 * 20 19 18 22 22 Si 1.86301 * 109.46924 * 184.99980 * 20 19 18 23 23 N 1.34662 * 125.79537 * 179.97438 * 2 1 3 24 24 H 1.08997 * 109.46739 * 89.99769 * 1 2 3 25 25 H 1.08999 * 109.47326 * 210.00176 * 1 2 3 26 26 H 1.09003 * 109.46752 * 330.00358 * 1 2 3 27 27 H 0.96997 * 120.00006 * 0.02562 * 6 4 3 28 28 H 1.09000 * 109.47210 * 180.02562 * 9 7 6 29 29 H 1.09000 * 109.47412 * 299.99892 * 9 7 6 30 30 H 1.09000 * 109.47909 * 299.99858 * 10 9 7 31 31 H 1.09006 * 109.47205 * 179.97438 * 10 9 7 32 32 H 1.09002 * 109.46618 * 60.00050 * 13 11 10 33 33 H 1.09000 * 109.46396 * 60.00510 * 14 13 11 34 34 H 1.09000 * 109.47212 * 180.02562 * 14 13 11 35 35 H 1.08993 * 109.47721 * 300.00868 * 14 13 11 36 36 H 1.08996 * 109.46965 * 59.99647 * 15 13 11 37 37 H 1.09000 * 109.47064 * 179.97438 * 15 13 11 38 38 H 1.09002 * 109.47169 * 299.99582 * 15 13 11 39 39 H 1.09000 * 109.47210 * 299.99623 * 16 11 10 40 40 H 1.09000 * 109.47412 * 179.97438 * 16 11 10 41 41 H 1.08996 * 109.47377 * 180.02562 * 17 16 11 42 42 H 1.08990 * 109.47429 * 59.99631 * 17 16 11 43 43 H 1.08002 * 126.83095 * 179.97438 * 18 3 2 44 44 H 1.09004 * 109.46777 * 304.99651 * 20 19 18 45 45 H 0.96698 * 114.00511 * 60.00410 * 21 20 19 46 46 H 1.48505 * 109.99789 * 179.97438 * 22 20 19 47 47 H 1.48493 * 109.99962 * 301.31846 * 22 20 19 48 48 H 0.96996 * 124.85569 * 0.02720 * 23 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3072 1.1092 0.0000 4 6 1.8704 2.5156 -0.0005 5 8 0.6841 2.7839 -0.0015 6 7 2.7853 3.5053 0.0001 7 6 2.3507 4.9044 0.0001 8 1 1.4393 5.0018 -0.5897 9 6 2.0788 5.3539 1.4370 10 6 3.3581 5.2171 2.2649 11 6 4.4556 6.0920 1.6560 12 1 4.1324 7.1330 1.6561 13 6 5.7348 5.9557 2.4843 14 6 6.8326 6.8301 1.8750 15 6 5.4625 6.4055 3.9211 16 6 4.7276 5.6425 0.2191 17 6 3.4483 5.7793 -0.6089 18 6 3.6883 0.6149 0.0006 19 6 3.6096 -0.7276 -0.0045 20 6 4.7819 -1.6745 -0.0115 21 8 5.5136 -1.5357 1.2080 22 14 4.1650 -3.4253 -0.1698 23 7 2.2946 -1.0923 0.0005 24 1 -0.3633 0.0000 -1.0277 25 1 -0.3634 -0.8899 0.5138 26 1 -0.3633 0.8901 0.5138 27 1 3.7314 3.2912 0.0005 28 1 1.7550 6.3947 1.4371 29 1 1.2969 4.7306 1.8709 30 1 3.6814 4.1762 2.2650 31 1 3.1644 5.5378 3.2886 32 1 6.0582 4.9147 2.4846 33 1 6.5093 7.8711 1.8744 34 1 7.7440 6.7327 2.4648 35 1 7.0265 6.5094 0.8515 36 1 4.6806 5.7822 4.3549 37 1 6.3737 6.3080 4.5112 38 1 5.1391 7.4465 3.9208 39 1 5.0509 4.6016 0.2190 40 1 5.5092 6.2660 -0.2149 41 1 3.6419 5.4586 -1.6325 42 1 3.1250 6.8202 -0.6089 43 1 4.5891 1.2107 0.0004 44 1 5.4325 -1.4409 -0.8543 45 1 4.9958 -1.7287 2.0015 46 1 5.3116 -4.3690 -0.1786 47 1 3.2515 -3.7457 0.9562 48 1 1.9733 -2.0074 0.0005 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16623128_9865296.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:40:09 Heat of formation + Delta-G solvation = -46.941774 kcal Electronic energy + Delta-G solvation = -26601.172556 eV Core-core repulsion = 23043.131950 eV Total energy + Delta-G solvation = -3558.040606 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 307.193 amu Computer time = 0.93 seconds Orbital eigenvalues (eV) -42.49930 -41.05109 -39.34828 -37.90161 -36.55253 -33.81225 -32.81334 -32.03720 -31.89967 -29.74475 -28.87186 -28.00535 -25.69473 -24.19792 -23.37572 -23.23630 -21.60621 -20.90178 -20.69773 -20.05748 -18.75566 -17.86023 -17.18228 -16.71703 -16.69555 -16.42784 -15.95306 -15.50052 -15.26853 -15.11796 -14.90937 -14.67344 -14.53852 -14.47169 -14.21083 -14.09087 -13.96972 -13.83342 -13.37621 -13.34505 -13.07216 -13.01505 -12.76308 -12.62427 -12.58171 -12.20570 -12.14835 -12.02481 -12.00549 -11.68455 -11.29647 -10.99189 -10.92443 -10.80189 -10.60402 -10.07483 -9.78168 -9.16460 -5.05411 0.71415 1.12480 1.26890 1.44568 1.81337 2.05410 2.47138 2.55959 3.33013 3.65882 3.68532 3.72034 3.80193 3.87527 4.04723 4.11002 4.17252 4.22507 4.29997 4.35812 4.42337 4.50436 4.54228 4.58423 4.61713 4.68440 4.69944 4.72017 4.76889 4.81972 4.83886 5.00423 5.02238 5.03181 5.09131 5.12218 5.16047 5.21456 5.24704 5.25549 5.32861 5.38815 5.42259 5.57697 5.63558 5.66128 5.69819 5.85799 6.38976 6.44253 6.69923 7.39522 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.096 4.096 2 C 0.118 3.882 3 C -0.265 4.265 4 C 0.586 3.414 5 O -0.587 6.587 6 N -0.707 5.707 7 C 0.148 3.852 8 H 0.067 0.933 9 C -0.126 4.126 10 C -0.107 4.107 11 C -0.076 4.076 12 H 0.071 0.929 13 C -0.089 4.089 14 C -0.149 4.149 15 C -0.151 4.151 16 C -0.114 4.114 17 C -0.120 4.120 18 C -0.137 4.137 19 C -0.020 4.020 20 C -0.048 4.048 21 O -0.540 6.540 22 Si 0.755 3.245 23 N -0.535 5.535 24 H 0.087 0.913 25 H 0.088 0.912 26 H 0.079 0.921 27 H 0.407 0.593 28 H 0.077 0.923 29 H 0.042 0.958 30 H 0.055 0.945 31 H 0.061 0.939 32 H 0.065 0.935 33 H 0.053 0.947 34 H 0.050 0.950 35 H 0.063 0.937 36 H 0.054 0.946 37 H 0.052 0.948 38 H 0.053 0.947 39 H 0.062 0.938 40 H 0.079 0.921 41 H 0.073 0.927 42 H 0.085 0.915 43 H 0.154 0.846 44 H 0.140 0.860 45 H 0.386 0.614 46 H -0.293 1.293 47 H -0.274 1.274 48 H 0.425 0.575 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.915 -2.123 -1.932 3.451 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C -0.002 4.002 3 C -0.274 4.274 4 C 0.376 3.624 5 O -0.470 6.470 6 N -0.359 5.359 7 C 0.044 3.956 8 H 0.085 0.915 9 C -0.164 4.164 10 C -0.145 4.145 11 C -0.094 4.094 12 H 0.089 0.911 13 C -0.108 4.108 14 C -0.206 4.206 15 C -0.208 4.208 16 C -0.151 4.151 17 C -0.158 4.158 18 C -0.162 4.162 19 C -0.129 4.129 20 C -0.157 4.157 21 O -0.348 6.348 22 Si 0.658 3.342 23 N -0.136 5.136 24 H 0.105 0.895 25 H 0.107 0.893 26 H 0.098 0.902 27 H 0.244 0.756 28 H 0.095 0.905 29 H 0.061 0.939 30 H 0.073 0.927 31 H 0.080 0.920 32 H 0.084 0.916 33 H 0.072 0.928 34 H 0.069 0.931 35 H 0.082 0.918 36 H 0.073 0.927 37 H 0.071 0.929 38 H 0.072 0.928 39 H 0.081 0.919 40 H 0.097 0.903 41 H 0.092 0.908 42 H 0.104 0.896 43 H 0.172 0.828 44 H 0.158 0.842 45 H 0.236 0.764 46 H -0.219 1.219 47 H -0.200 1.200 48 H 0.267 0.733 Dipole moment (debyes) X Y Z Total from point charges 1.544 -2.684 -1.975 3.672 hybrid contribution 0.368 -0.068 1.344 1.395 sum 1.912 -2.752 -0.631 3.410 Atomic orbital electron populations 1.20604 0.86130 1.04388 1.04195 1.20549 0.94264 0.85597 0.99797 1.20235 0.94149 0.91844 1.21198 1.17627 0.85081 0.84987 0.74729 1.90719 1.18084 1.84998 1.53177 1.45806 1.09840 1.05423 1.74837 1.20898 0.98073 0.80298 0.96343 0.91472 1.21855 0.97759 1.01468 0.95364 1.21535 0.94387 0.99814 0.98756 1.21165 0.94138 0.99615 0.94507 0.91095 1.21106 0.95062 0.99831 0.94772 1.21896 0.97938 0.99705 1.01099 1.21905 1.01385 1.01282 0.96257 1.21639 0.97212 1.01748 0.94527 1.21789 0.94491 1.00178 0.99358 1.21935 0.95334 0.93215 1.05678 1.20607 0.84672 0.95492 1.12086 1.24648 0.93094 1.07622 0.90381 1.86628 1.40986 1.91033 1.16137 0.94527 0.80438 0.71914 0.87292 1.41700 1.05251 1.08749 1.57863 0.89461 0.89334 0.90194 0.75622 0.90463 0.93914 0.92664 0.92015 0.91607 0.92765 0.93061 0.91783 0.92734 0.92935 0.92752 0.91891 0.90295 0.90818 0.89636 0.82798 0.84241 0.76440 1.21947 1.20045 0.73325 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -0.07 9.88 71.24 0.70 0.63 16 2 C 0.12 0.29 7.17 41.78 0.30 0.59 16 3 C -0.26 -1.42 6.29 -19.04 -0.12 -1.54 16 4 C 0.59 5.09 7.77 86.62 0.67 5.77 16 5 O -0.59 -8.92 14.48 -4.14 -0.06 -8.98 16 6 N -0.71 -2.17 4.23 -445.93 -1.89 -4.06 16 7 C 0.15 0.37 2.78 44.99 0.13 0.50 16 8 H 0.07 0.46 7.58 -2.39 -0.02 0.44 16 9 C -0.13 -0.37 5.60 30.59 0.17 -0.20 16 10 C -0.11 -0.06 4.69 30.59 0.14 0.08 16 11 C -0.08 0.16 1.77 -10.79 -0.02 0.14 16 12 H 0.07 -0.10 8.14 -2.39 -0.02 -0.12 16 13 C -0.09 0.15 2.51 -10.79 -0.03 0.13 16 14 C -0.15 0.35 8.84 71.98 0.64 0.98 16 15 C -0.15 0.10 8.84 71.98 0.64 0.73 16 16 C -0.11 0.42 4.68 30.59 0.14 0.56 16 17 C -0.12 0.29 5.61 30.60 0.17 0.46 16 18 C -0.14 -0.18 10.45 23.62 0.25 0.06 16 19 C -0.02 0.03 6.09 40.98 0.25 0.28 16 20 C -0.05 0.19 2.98 71.24 0.21 0.40 16 21 O -0.54 0.28 12.88 -148.98 -1.92 -1.64 16 22 Si 0.75 -4.43 30.96 68.60 2.12 -2.30 16 23 N -0.54 1.38 5.41 -171.06 -0.93 0.46 16 24 H 0.09 -0.04 8.14 -2.39 -0.02 -0.06 16 25 H 0.09 -0.39 8.14 -2.39 -0.02 -0.41 16 26 H 0.08 0.50 6.47 -2.39 -0.02 0.49 16 27 H 0.41 -0.28 5.99 -92.71 -0.56 -0.83 16 28 H 0.08 0.10 8.14 -2.39 -0.02 0.08 16 29 H 0.04 0.35 8.14 -2.39 -0.02 0.33 16 30 H 0.05 0.12 7.60 -2.39 -0.02 0.10 16 31 H 0.06 0.08 6.43 -2.38 -0.02 0.07 16 32 H 0.07 -0.06 8.14 -2.39 -0.02 -0.08 16 33 H 0.05 -0.11 8.14 -2.39 -0.02 -0.13 16 34 H 0.05 -0.08 8.14 -2.39 -0.02 -0.10 16 35 H 0.06 -0.22 6.43 -2.39 -0.02 -0.23 16 36 H 0.05 0.00 6.43 -2.39 -0.02 -0.01 16 37 H 0.05 -0.02 8.14 -2.39 -0.02 -0.04 16 38 H 0.05 -0.03 8.14 -2.39 -0.02 -0.05 16 39 H 0.06 -0.26 6.51 -2.39 -0.02 -0.27 16 40 H 0.08 -0.37 6.43 -2.39 -0.02 -0.38 16 41 H 0.07 -0.20 8.14 -2.39 -0.02 -0.22 16 42 H 0.09 -0.29 8.14 -2.39 -0.02 -0.31 16 43 H 0.15 -0.22 7.70 -2.91 -0.02 -0.24 16 44 H 0.14 -0.83 7.96 -2.38 -0.02 -0.85 16 45 H 0.39 -2.11 8.70 -74.06 -0.64 -2.75 16 46 H -0.29 -0.66 7.11 99.48 0.71 0.05 16 47 H -0.27 0.78 7.11 99.48 0.71 1.48 16 48 H 0.43 -3.37 6.72 -92.71 -0.62 -3.99 16 Total: 0.00 -15.76 366.78 0.77 -14.99 By element: Atomic # 1 Polarization: -7.24 SS G_CDS: -0.81 Total: -8.05 kcal Atomic # 6 Polarization: 5.33 SS G_CDS: 4.25 Total: 9.58 kcal Atomic # 7 Polarization: -0.79 SS G_CDS: -2.81 Total: -3.60 kcal Atomic # 8 Polarization: -8.64 SS G_CDS: -1.98 Total: -10.62 kcal Atomic # 14 Polarization: -4.43 SS G_CDS: 2.12 Total: -2.30 kcal Total: -15.76 0.77 -14.99 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16623128_9865296.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -31.952 kcal (2) G-P(sol) polarization free energy of solvation -15.759 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -47.711 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.770 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.989 kcal (6) G-S(sol) free energy of system = (1) + (5) -46.942 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.93 seconds