Wall clock time and date at job start Sun Mar 7 2021 09:40:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46503 * 1 3 3 C 1.35536 * 125.67600 * 2 1 4 4 C 1.35453 * 108.87084 * 179.97438 * 3 2 1 5 5 C 1.50700 * 126.06733 * 179.97438 * 4 3 2 6 6 O 1.42896 * 109.46876 * 245.00210 * 5 4 3 7 7 Si 1.86296 * 109.46956 * 5.00450 * 5 4 3 8 8 C 1.39839 * 107.86495 * 0.02562 * 4 3 2 9 9 C 1.37653 * 125.67698 * 179.97438 * 2 1 3 10 10 C 1.46674 * 126.23063 * 0.26637 * 9 2 1 11 11 O 1.21693 * 120.00333 * 353.99331 * 10 9 2 12 12 N 1.34776 * 119.99411 * 173.99432 * 10 9 2 13 13 C 1.46503 * 119.99747 * 185.15555 * 12 10 9 14 14 H 1.08996 * 109.47400 * 324.99937 * 13 12 10 15 15 C 1.52997 * 109.47168 * 85.00278 * 13 12 10 16 16 C 1.52994 * 109.47541 * 59.99562 * 15 13 12 17 17 C 1.53008 * 109.46881 * 60.00513 * 16 15 13 18 18 H 1.08999 * 109.47278 * 59.99830 * 17 16 15 19 19 N 1.46500 * 109.47007 * 180.02562 * 17 16 15 20 20 O 1.21801 * 119.99700 * 239.99509 * 19 17 16 21 21 O 1.21796 * 120.00207 * 59.99735 * 19 17 16 22 22 C 1.53000 * 109.46609 * 299.99677 * 17 16 15 23 23 C 1.52998 * 109.47222 * 204.99907 * 13 12 10 24 24 H 1.09000 * 109.47233 * 273.96858 * 1 2 3 25 25 H 1.08998 * 109.47027 * 33.96552 * 1 2 3 26 26 H 1.08994 * 109.47220 * 153.96366 * 1 2 3 27 27 H 1.07997 * 125.56642 * 0.02562 * 3 2 1 28 28 H 1.09000 * 109.46726 * 125.00378 * 5 4 3 29 29 H 0.96701 * 114.00261 * 60.00881 * 6 5 4 30 30 H 1.48503 * 109.99598 * 179.97438 * 7 5 4 31 31 H 1.48503 * 110.00033 * 301.31566 * 7 5 4 32 32 H 1.07996 * 126.45738 * 180.02562 * 8 4 3 33 33 H 0.96999 * 120.00435 * 5.15101 * 12 10 9 34 34 H 1.08999 * 109.47114 * 180.02562 * 15 13 12 35 35 H 1.09004 * 109.47274 * 299.99551 * 15 13 12 36 36 H 1.08999 * 109.47304 * 300.00359 * 16 15 13 37 37 H 1.09002 * 109.47568 * 180.02562 * 16 15 13 38 38 H 1.08999 * 109.47426 * 300.00063 * 22 17 16 39 39 H 1.09003 * 109.47115 * 179.97438 * 22 17 16 40 40 H 1.09005 * 109.47429 * 59.99704 * 23 13 12 41 41 H 1.08999 * 109.47219 * 179.97438 * 23 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2555 1.1010 0.0000 4 6 3.5522 0.7094 0.0006 5 6 4.7537 1.6190 0.0002 6 8 5.4773 1.4517 -1.2205 7 14 4.1926 3.3889 0.1521 8 6 3.5780 -0.6888 0.0004 9 6 2.2678 -1.1182 0.0005 10 6 1.8124 -2.5124 -0.0044 11 8 0.6267 -2.7656 0.1009 12 7 2.7070 -3.5131 -0.1254 13 6 2.2451 -4.8983 -0.2439 14 1 1.3489 -5.0355 0.3611 15 6 1.9239 -5.2053 -1.7080 16 6 3.1817 -5.0127 -2.5574 17 6 4.2785 -5.9599 -2.0665 18 1 3.9348 -6.9905 -2.1547 19 7 5.4832 -5.7751 -2.8794 20 8 5.9380 -6.7091 -3.5152 21 8 6.0299 -4.6875 -2.9195 22 6 4.5998 -5.6529 -0.6025 23 6 3.3418 -5.8455 0.2469 24 1 -0.3634 0.0711 1.0252 25 1 -0.3633 0.8523 -0.5741 26 1 -0.3633 -0.9233 -0.4511 27 1 1.9082 2.1236 0.0004 28 1 5.3989 1.3688 0.8423 29 1 4.9637 1.6573 -2.0136 30 1 5.3684 4.2960 0.1536 31 1 3.2865 3.7329 -0.9731 32 1 4.4584 -1.3143 0.0011 33 1 3.6568 -3.3162 -0.1341 34 1 1.5797 -6.2357 -1.7961 35 1 1.1425 -4.5305 -2.0578 36 1 3.5254 -3.9821 -2.4692 37 1 2.9528 -5.2309 -3.6005 38 1 4.9435 -4.6223 -0.5143 39 1 5.3808 -6.3280 -0.2526 40 1 3.5707 -5.6268 1.2900 41 1 2.9979 -6.8761 0.1591 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16623254_10803934.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:40:20 Heat of formation + Delta-G solvation = -24.410678 kcal Electronic energy + Delta-G solvation = -26687.747235 eV Core-core repulsion = 22766.280072 eV Total energy + Delta-G solvation = -3921.467163 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 310.141 amu Computer time = 0.77 seconds Orbital eigenvalues (eV) -43.35318 -42.62647 -41.05951 -39.11260 -37.79329 -37.36543 -35.38131 -33.95936 -32.55632 -32.40758 -30.52213 -28.42067 -27.25702 -25.77726 -24.49553 -24.27885 -23.27699 -21.59262 -20.74671 -20.68413 -19.73775 -19.31678 -19.00349 -18.24308 -17.89308 -17.03801 -17.01369 -16.95757 -16.42137 -16.04159 -15.69609 -15.52043 -15.15050 -15.11281 -14.84098 -14.45774 -14.14738 -14.02547 -13.96316 -13.88407 -13.52977 -13.34538 -13.24922 -12.83426 -12.66695 -12.45078 -12.38752 -12.37670 -11.98194 -11.96037 -11.77943 -11.70338 -11.16781 -10.46044 -10.37278 -9.75684 -9.33359 -4.94940 -0.42260 0.35903 0.65837 1.31719 1.45228 1.49995 1.61174 2.00144 2.16252 2.25932 2.74573 2.82052 3.20353 3.29666 3.45820 3.48875 3.57293 3.66382 3.71234 3.72654 3.81959 3.86938 4.02600 4.10286 4.13598 4.19876 4.31504 4.38133 4.47995 4.52605 4.55859 4.58601 4.67308 4.68758 4.72575 4.76302 5.12228 5.20482 5.35958 5.59526 5.83603 6.05207 6.27112 6.52890 6.62927 7.01616 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.062 3.938 2 N -0.404 5.404 3 C 0.029 3.971 4 C -0.204 4.204 5 C -0.038 4.038 6 O -0.530 6.530 7 Si 0.679 3.321 8 C -0.110 4.110 9 C -0.058 4.058 10 C 0.595 3.405 11 O -0.545 6.545 12 N -0.717 5.717 13 C 0.143 3.857 14 H 0.106 0.894 15 C -0.125 4.125 16 C -0.124 4.124 17 C 0.018 3.982 18 H 0.137 0.863 19 N -0.019 5.019 20 O -0.164 6.164 21 O -0.154 6.154 22 C -0.127 4.127 23 C -0.122 4.122 24 H 0.081 0.919 25 H 0.084 0.916 26 H 0.104 0.896 27 H 0.173 0.827 28 H 0.115 0.885 29 H 0.374 0.626 30 H -0.257 1.257 31 H -0.261 1.261 32 H 0.145 0.855 33 H 0.404 0.596 34 H 0.085 0.915 35 H 0.087 0.913 36 H 0.092 0.908 37 H 0.082 0.918 38 H 0.090 0.910 39 H 0.088 0.912 40 H 0.093 0.907 41 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.080 0.188 3.904 5.650 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 N -0.075 5.075 3 C -0.108 4.108 4 C -0.210 4.210 5 C -0.149 4.149 6 O -0.336 6.336 7 Si 0.580 3.420 8 C -0.136 4.136 9 C -0.171 4.171 10 C 0.384 3.616 11 O -0.424 6.424 12 N -0.370 5.370 13 C 0.039 3.961 14 H 0.123 0.877 15 C -0.165 4.165 16 C -0.162 4.162 17 C -0.080 4.080 18 H 0.155 0.845 19 N 0.504 4.496 20 O -0.382 6.382 21 O -0.376 6.376 22 C -0.166 4.166 23 C -0.160 4.160 24 H 0.100 0.900 25 H 0.103 0.897 26 H 0.123 0.877 27 H 0.190 0.810 28 H 0.133 0.867 29 H 0.222 0.778 30 H -0.182 1.182 31 H -0.186 1.186 32 H 0.163 0.837 33 H 0.240 0.760 34 H 0.103 0.897 35 H 0.106 0.894 36 H 0.111 0.889 37 H 0.101 0.899 38 H 0.108 0.892 39 H 0.107 0.893 40 H 0.111 0.889 41 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges -5.539 0.461 4.436 7.111 hybrid contribution 0.792 -0.292 -1.373 1.612 sum -4.747 0.169 3.063 5.652 Atomic orbital electron populations 1.22371 0.75530 1.05679 1.04265 1.43803 1.06986 1.04671 1.52079 1.21909 0.90140 0.91746 1.07019 1.19742 0.93686 0.94787 1.12788 1.24279 0.93522 1.07577 0.89498 1.86604 1.41623 1.89938 1.15424 0.95364 0.82253 0.74937 0.89397 1.21206 0.94232 0.94712 1.03495 1.19966 0.90326 0.87515 1.19287 1.16957 0.85482 0.83561 0.75621 1.90804 1.16306 1.84747 1.50503 1.45769 1.10061 1.05961 1.75245 1.21031 0.98531 0.80123 0.96456 0.87651 1.21939 0.96439 1.03761 0.94313 1.21880 0.93516 0.99749 1.01079 1.24363 0.84346 1.05820 0.93470 0.84530 1.44898 1.03629 1.00369 1.00670 1.94593 1.67900 1.33344 1.42381 1.94564 1.61589 1.12988 1.68456 1.21914 1.00303 1.04744 0.89597 1.21838 0.93068 1.00796 1.00327 0.90042 0.89715 0.87704 0.80965 0.86726 0.77839 1.18216 1.18564 0.83730 0.75981 0.89654 0.89419 0.88904 0.89910 0.89169 0.89313 0.88873 0.88941 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.09 10.64 59.85 0.64 0.54 16 2 N -0.40 -0.08 3.16 -120.24 -0.38 -0.46 16 3 C 0.03 -0.02 9.94 -16.91 -0.17 -0.19 16 4 C -0.20 0.03 5.43 -105.02 -0.57 -0.54 16 5 C -0.04 0.02 3.02 36.01 0.11 0.13 16 6 O -0.53 -0.71 12.88 -35.23 -0.45 -1.16 16 7 Si 0.68 -0.95 30.60 -169.99 -5.20 -6.15 16 8 C -0.11 -0.01 10.29 -39.12 -0.40 -0.42 16 9 C -0.06 -0.05 6.88 -81.98 -0.56 -0.61 16 10 C 0.60 0.49 7.73 -12.86 -0.10 0.39 16 11 O -0.54 -1.84 14.29 5.19 0.07 -1.76 16 12 N -0.72 1.52 4.22 -55.12 -0.23 1.29 16 13 C 0.14 -0.46 2.83 -67.93 -0.19 -0.66 16 14 H 0.11 -0.21 7.51 -51.93 -0.39 -0.60 16 15 C -0.13 0.41 5.60 -26.74 -0.15 0.26 16 16 C -0.12 0.30 5.15 -26.73 -0.14 0.17 16 17 C 0.02 -0.04 2.88 -67.93 -0.20 -0.24 16 18 H 0.14 -0.50 8.09 -51.93 -0.42 -0.92 16 19 N -0.02 -0.03 3.82 -4.89 -0.02 -0.05 16 20 O -0.16 -0.66 19.21 -29.46 -0.57 -1.23 16 21 O -0.15 -0.55 18.50 -29.46 -0.55 -1.09 16 22 C -0.13 0.49 5.13 -26.73 -0.14 0.35 16 23 C -0.12 0.61 5.61 -26.73 -0.15 0.46 16 24 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 25 H 0.08 -0.30 8.14 -51.93 -0.42 -0.72 16 26 H 0.10 0.00 6.22 -51.93 -0.32 -0.32 16 27 H 0.17 -0.56 6.21 -52.49 -0.33 -0.89 16 28 H 0.11 -0.11 7.96 -51.93 -0.41 -0.52 16 29 H 0.37 -0.48 8.70 45.56 0.40 -0.08 16 30 H -0.26 -0.57 7.11 56.52 0.40 -0.17 16 31 H -0.26 -0.09 7.11 56.52 0.40 0.31 16 32 H 0.14 -0.19 7.45 -52.49 -0.39 -0.58 16 33 H 0.40 -1.36 5.77 -40.82 -0.24 -1.59 16 34 H 0.08 -0.39 8.14 -51.93 -0.42 -0.81 16 35 H 0.09 -0.14 8.14 -51.93 -0.42 -0.56 16 36 H 0.09 -0.13 7.49 -51.93 -0.39 -0.52 16 37 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 38 H 0.09 -0.33 6.39 -51.93 -0.33 -0.66 16 39 H 0.09 -0.33 8.14 -51.93 -0.42 -0.75 16 40 H 0.09 -0.49 8.14 -51.93 -0.42 -0.91 16 41 H 0.09 -0.56 8.14 -51.93 -0.42 -0.98 16 LS Contribution 338.94 15.07 5.11 5.11 Total: 0.00 -8.70 338.94 -9.64 -18.34 By element: Atomic # 1 Polarization: -7.08 SS G_CDS: -5.40 Total: -12.48 kcal Atomic # 6 Polarization: 1.67 SS G_CDS: -2.02 Total: -0.35 kcal Atomic # 7 Polarization: 1.41 SS G_CDS: -0.63 Total: 0.78 kcal Atomic # 8 Polarization: -3.75 SS G_CDS: -1.49 Total: -5.24 kcal Atomic # 14 Polarization: -0.95 SS G_CDS: -5.20 Total: -6.15 kcal Total LS contribution 5.11 Total: 5.11 kcal Total: -8.70 -9.64 -18.34 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16623254_10803934.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -6.071 kcal (2) G-P(sol) polarization free energy of solvation -8.700 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -14.771 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.640 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.340 kcal (6) G-S(sol) free energy of system = (1) + (5) -24.411 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.77 seconds