Wall clock time and date at job start Sun Mar 7 2021 09:42:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42906 * 1 3 3 Si 1.86298 * 109.46890 * 2 1 4 4 C 1.50696 * 109.47293 * 119.99964 * 2 1 3 5 5 C 1.38507 * 119.80547 * 245.27758 * 4 2 1 6 6 C 1.37828 * 120.29913 * 180.27949 * 5 4 2 7 7 C 1.39665 * 119.90870 * 359.71583 * 6 5 4 8 8 C 1.47539 * 120.19309 * 180.02562 * 7 6 5 9 9 O 1.21587 * 120.00093 * 179.97438 * 8 7 6 10 10 N 1.34773 * 119.99662 * 359.97438 * 8 7 6 11 11 C 1.46497 * 119.99650 * 179.97438 * 10 8 7 12 12 H 1.09000 * 109.47361 * 325.00019 * 11 10 8 13 13 C 1.53003 * 109.47238 * 85.00307 * 11 10 8 14 14 C 1.52996 * 109.47292 * 59.99706 * 13 11 10 15 15 C 1.52999 * 109.46779 * 60.00148 * 14 13 11 16 16 H 1.09000 * 109.47687 * 60.00348 * 15 14 13 17 17 N 1.46508 * 109.46834 * 179.97438 * 15 14 13 18 18 O 1.21795 * 120.00104 * 240.00331 * 17 15 14 19 19 O 1.21797 * 119.99736 * 59.99948 * 17 15 14 20 20 C 1.52992 * 109.47424 * 299.99856 * 15 14 13 21 21 C 1.53001 * 109.47329 * 60.00392 * 20 15 14 22 22 C 1.40185 * 119.61978 * 0.02562 * 7 6 5 23 23 O 1.35643 * 120.15219 * 180.02562 * 22 7 6 24 24 C 1.38099 * 119.80353 * 64.99588 * 4 2 1 25 25 H 0.96698 * 113.99770 * 299.99639 * 1 2 3 26 26 H 1.08999 * 109.46908 * 240.00199 * 2 1 3 27 27 H 1.48501 * 110.00210 * 300.00187 * 3 2 1 28 28 H 1.48497 * 110.00179 * 61.32105 * 3 2 1 29 29 H 1.07999 * 119.85092 * 0.02562 * 5 4 2 30 30 H 1.07997 * 120.04506 * 179.74973 * 6 5 4 31 31 H 0.97002 * 120.00431 * 359.97438 * 10 8 7 32 32 H 1.09004 * 109.47215 * 180.02562 * 13 11 10 33 33 H 1.09003 * 109.46568 * 299.99504 * 13 11 10 34 34 H 1.08995 * 109.47097 * 300.00179 * 14 13 11 35 35 H 1.08993 * 109.47243 * 180.02562 * 14 13 11 36 36 H 1.09004 * 109.47146 * 300.00094 * 20 15 14 37 37 H 1.08998 * 109.47581 * 180.02562 * 20 15 14 38 38 H 1.08993 * 109.47547 * 180.02562 * 21 20 15 39 39 H 1.08995 * 109.46727 * 59.99468 * 21 20 15 40 40 H 0.96709 * 114.00068 * 269.97767 * 23 22 7 41 41 H 1.08002 * 119.96143 * 0.02562 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 2.6348 -0.0057 2.1933 6 6 3.1039 -0.6464 3.3198 7 6 2.8645 -2.0112 3.4953 8 6 3.3633 -2.7032 4.6991 9 8 3.1524 -3.8913 4.8485 10 7 4.0526 -2.0184 5.6330 11 6 4.5474 -2.7054 6.8285 12 1 3.8336 -3.4728 7.1282 13 6 5.8972 -3.3566 6.5207 14 6 6.8990 -2.2794 6.1001 15 6 7.0678 -1.2686 7.2362 16 1 7.4359 -1.7797 8.1257 17 7 8.0276 -0.2374 6.8337 18 8 9.0482 -0.0711 7.4771 19 8 7.8048 0.4534 5.8557 20 6 5.7180 -0.6174 7.5441 21 6 4.7161 -1.6945 7.9646 22 6 2.1475 -2.7197 2.5211 23 8 1.9084 -4.0453 2.6808 24 6 1.6827 -2.0589 1.3941 25 1 -0.3933 0.4416 0.7651 26 1 1.7923 -0.5138 -0.8900 27 1 1.5614 2.4679 -1.2085 28 1 1.5879 2.4585 1.2242 29 1 2.8201 1.0498 2.0588 30 1 3.6554 -0.0938 4.0660 31 1 4.2211 -1.0706 5.5136 32 1 6.2652 -3.8682 7.4101 33 1 5.7769 -4.0768 5.7114 34 1 6.5309 -1.7683 5.2106 35 1 7.8605 -2.7434 5.8804 36 1 5.3499 -0.1061 6.6545 37 1 5.8383 0.1031 8.3531 38 1 3.7544 -1.2306 8.1836 39 1 5.0843 -2.2056 8.8541 40 1 2.5935 -4.6165 2.3072 41 1 1.1299 -2.6007 0.6409 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16623254_13422076.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:42:47 Heat of formation + Delta-G solvation = -85.942778 kcal Electronic energy + Delta-G solvation = -27994.585039 eV Core-core repulsion = 23844.504841 eV Total energy + Delta-G solvation = -4150.080198 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 323.129 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -43.40288 -41.86988 -40.70298 -39.18582 -38.40295 -37.42144 -37.27582 -35.23657 -33.27456 -32.58114 -31.58453 -31.18538 -27.84604 -27.03246 -24.49737 -24.05069 -23.98373 -23.29152 -22.08989 -20.80307 -19.87869 -19.59777 -19.33564 -18.91906 -18.34901 -18.29777 -17.42264 -16.97243 -16.69137 -16.49959 -16.29525 -16.14484 -15.82408 -15.41361 -15.16169 -15.00751 -14.85573 -14.53461 -14.17545 -13.93790 -13.90421 -13.77641 -13.38472 -13.00018 -12.85427 -12.68041 -12.50556 -12.45113 -12.41691 -12.15197 -12.01785 -12.00179 -11.73875 -11.66682 -10.97451 -10.71167 -10.37364 -10.16252 -9.88304 -5.07125 -0.49758 -0.47091 0.03149 0.60808 1.12712 1.47338 1.65145 1.85729 1.86910 2.47325 2.70335 2.78702 3.02722 3.16969 3.22305 3.26702 3.36642 3.44444 3.52002 3.60199 3.65312 3.69347 3.78204 3.89768 4.01016 4.08050 4.13137 4.30849 4.34262 4.45005 4.48013 4.51795 4.57307 4.61601 4.65352 4.77222 4.89094 5.03064 5.12929 5.21300 5.31005 5.45382 6.24673 6.25394 6.58001 6.62732 7.05830 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.526 6.526 2 C -0.081 4.081 3 Si 0.690 3.310 4 C -0.072 4.072 5 C -0.136 4.136 6 C -0.064 4.064 7 C -0.167 4.167 8 C 0.562 3.438 9 O -0.515 6.515 10 N -0.727 5.727 11 C 0.142 3.858 12 H 0.104 0.896 13 C -0.126 4.126 14 C -0.123 4.123 15 C 0.017 3.983 16 H 0.137 0.863 17 N -0.018 5.018 18 O -0.163 6.163 19 O -0.156 6.156 20 C -0.126 4.126 21 C -0.123 4.123 22 C 0.173 3.827 23 O -0.476 6.476 24 C -0.129 4.129 25 H 0.378 0.622 26 H 0.123 0.877 27 H -0.255 1.255 28 H -0.258 1.258 29 H 0.137 0.863 30 H 0.133 0.867 31 H 0.398 0.602 32 H 0.084 0.916 33 H 0.089 0.911 34 H 0.091 0.909 35 H 0.083 0.917 36 H 0.088 0.912 37 H 0.088 0.912 38 H 0.092 0.908 39 H 0.092 0.908 40 H 0.398 0.602 41 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.163 0.882 1.039 1.791 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.332 6.332 2 C -0.191 4.191 3 Si 0.591 3.409 4 C -0.073 4.073 5 C -0.154 4.154 6 C -0.083 4.083 7 C -0.171 4.171 8 C 0.349 3.651 9 O -0.390 6.390 10 N -0.381 5.381 11 C 0.037 3.963 12 H 0.122 0.878 13 C -0.165 4.165 14 C -0.161 4.161 15 C -0.081 4.081 16 H 0.155 0.845 17 N 0.505 4.495 18 O -0.382 6.382 19 O -0.378 6.378 20 C -0.164 4.164 21 C -0.161 4.161 22 C 0.127 3.873 23 O -0.287 6.287 24 C -0.147 4.147 25 H 0.225 0.775 26 H 0.141 0.859 27 H -0.179 1.179 28 H -0.183 1.183 29 H 0.155 0.845 30 H 0.150 0.850 31 H 0.235 0.765 32 H 0.103 0.897 33 H 0.108 0.892 34 H 0.110 0.890 35 H 0.101 0.899 36 H 0.106 0.894 37 H 0.107 0.893 38 H 0.110 0.890 39 H 0.110 0.890 40 H 0.257 0.743 41 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges -0.122 0.151 1.121 1.138 hybrid contribution -0.285 0.323 0.275 0.511 sum -0.407 0.474 1.396 1.530 Atomic orbital electron populations 1.86638 1.17245 1.79996 1.49346 1.25160 0.84326 1.11380 0.98195 0.94893 0.91514 0.73989 0.80489 1.20402 0.96637 0.94005 0.96246 1.21018 0.99857 1.00295 0.94198 1.21134 0.97312 0.92569 0.97281 1.20387 1.04253 0.94969 0.97445 1.18054 0.77635 0.86741 0.82621 1.90842 1.56343 1.14570 1.77282 1.46062 1.57114 1.13240 1.21727 1.21017 0.95814 0.95145 0.84302 0.87798 1.21936 0.93567 0.97184 1.03780 1.21875 1.02099 0.95761 0.96383 1.24379 0.91157 0.89474 1.03045 0.84498 1.44900 1.02425 1.02205 0.99983 1.94600 1.16583 1.74353 1.52620 1.94540 1.81710 1.44604 1.16914 1.21900 0.91145 0.99274 1.04131 1.21845 0.99835 0.95983 0.98446 1.18495 0.92441 0.85180 0.91203 1.84766 1.49461 1.12571 1.81950 1.21365 1.01267 0.94559 0.97538 0.77455 0.85913 1.17950 1.18301 0.84538 0.84974 0.76475 0.89746 0.89211 0.89011 0.89857 0.89360 0.89349 0.88982 0.88959 0.74348 0.84152 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.12 12.83 -35.23 -0.45 -0.57 16 2 C -0.08 0.13 2.79 36.00 0.10 0.23 16 3 Si 0.69 -1.63 29.87 -169.99 -5.08 -6.70 16 4 C -0.07 0.10 5.35 -104.58 -0.56 -0.46 16 5 C -0.14 0.32 8.64 -39.63 -0.34 -0.02 16 6 C -0.06 0.15 9.54 -39.20 -0.37 -0.22 16 7 C -0.17 0.00 5.89 -104.84 -0.62 -0.61 16 8 C 0.56 0.35 7.73 -12.47 -0.10 0.25 16 9 O -0.51 -2.08 14.82 -16.58 -0.25 -2.33 16 10 N -0.73 1.95 4.18 -54.84 -0.23 1.72 16 11 C 0.14 -0.48 2.78 -67.93 -0.19 -0.67 16 12 H 0.10 -0.19 7.58 -51.93 -0.39 -0.58 16 13 C -0.13 0.45 5.60 -26.73 -0.15 0.30 16 14 C -0.12 0.40 5.15 -26.73 -0.14 0.26 16 15 C 0.02 -0.05 2.88 -67.93 -0.20 -0.25 16 16 H 0.14 -0.57 8.09 -51.93 -0.42 -0.99 16 17 N -0.02 -0.02 3.82 -4.89 -0.02 -0.04 16 18 O -0.16 -0.53 19.21 -29.46 -0.57 -1.10 16 19 O -0.16 -0.34 18.50 -29.46 -0.55 -0.88 16 20 C -0.13 0.57 5.13 -26.73 -0.14 0.44 16 21 C -0.12 0.65 5.61 -26.73 -0.15 0.50 16 22 C 0.17 0.16 6.72 -38.69 -0.26 -0.10 16 23 O -0.48 -0.88 11.58 -40.50 -0.47 -1.35 16 24 C -0.13 0.01 9.60 -39.47 -0.38 -0.37 16 25 H 0.38 -0.97 8.70 45.56 0.40 -0.57 16 26 H 0.12 -0.30 7.96 -51.93 -0.41 -0.71 16 27 H -0.25 -0.32 7.11 56.52 0.40 0.09 16 28 H -0.26 0.17 6.99 56.52 0.40 0.57 16 29 H 0.14 -0.56 4.80 -52.49 -0.25 -0.81 16 30 H 0.13 -0.67 6.40 -52.49 -0.34 -1.00 16 31 H 0.40 -1.81 4.90 -40.82 -0.20 -2.01 16 32 H 0.08 -0.40 8.14 -51.93 -0.42 -0.82 16 33 H 0.09 -0.16 8.14 -51.93 -0.42 -0.59 16 34 H 0.09 -0.25 7.49 -51.93 -0.39 -0.64 16 35 H 0.08 -0.22 8.14 -51.93 -0.42 -0.65 16 36 H 0.09 -0.42 6.39 -51.93 -0.33 -0.75 16 37 H 0.09 -0.39 8.14 -51.93 -0.42 -0.81 16 38 H 0.09 -0.50 8.14 -51.93 -0.42 -0.92 16 39 H 0.09 -0.57 8.14 -51.93 -0.42 -0.99 16 40 H 0.40 -0.76 9.06 45.56 0.41 -0.35 16 41 H 0.14 -0.04 8.06 -52.49 -0.42 -0.46 16 LS Contribution 340.61 15.07 5.13 5.13 Total: 0.00 -9.81 340.61 -10.05 -19.86 By element: Atomic # 1 Polarization: -8.92 SS G_CDS: -4.09 Total: -13.01 kcal Atomic # 6 Polarization: 2.76 SS G_CDS: -3.49 Total: -0.73 kcal Atomic # 7 Polarization: 1.93 SS G_CDS: -0.25 Total: 1.68 kcal Atomic # 8 Polarization: -3.95 SS G_CDS: -2.28 Total: -6.23 kcal Atomic # 14 Polarization: -1.63 SS G_CDS: -5.08 Total: -6.70 kcal Total LS contribution 5.13 Total: 5.13 kcal Total: -9.81 -10.05 -19.86 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16623254_13422076.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -66.086 kcal (2) G-P(sol) polarization free energy of solvation -9.810 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -75.895 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.047 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.857 kcal (6) G-S(sol) free energy of system = (1) + (5) -85.943 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds