Wall clock time and date at job start Sun Mar 7 2021 09:45:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.35959 * 116.99982 * 2 1 4 4 C 1.39456 * 120.12028 * 180.02562 * 3 2 1 5 5 O 1.34770 * 133.23934 * 0.29220 * 4 3 2 6 6 C 1.34938 * 110.83811 * 180.11417 * 5 4 3 7 7 C 1.46988 * 125.13810 * 179.87391 * 6 5 4 8 8 O 1.21650 * 120.00269 * 179.97438 * 7 6 5 9 9 N 1.34784 * 119.99966 * 359.69417 * 7 6 5 10 10 C 1.46499 * 119.99971 * 179.97438 * 9 7 6 11 11 H 1.09007 * 109.47230 * 34.99566 * 10 9 7 12 12 C 1.52990 * 109.47333 * 154.99849 * 10 9 7 13 13 C 1.53005 * 109.47239 * 60.00001 * 12 10 9 14 14 C 1.53001 * 109.46842 * 60.00147 * 13 12 10 15 15 H 1.08996 * 109.47521 * 60.00405 * 14 13 12 16 16 N 1.46500 * 109.47166 * 180.02562 * 14 13 12 17 17 O 1.21801 * 119.99867 * 59.99969 * 16 14 13 18 18 O 1.21798 * 120.00529 * 240.00040 * 16 14 13 19 19 C 1.52999 * 109.46922 * 299.99944 * 14 13 12 20 20 C 1.53000 * 109.47023 * 60.00496 * 19 14 13 21 21 C 1.35806 * 109.71686 * 359.60712 * 6 5 4 22 22 C 1.40608 * 119.13599 * 179.97438 * 4 3 2 23 23 C 1.39783 * 120.12145 * 359.97438 * 22 4 3 24 24 C 1.50696 * 120.09573 * 180.02562 * 23 22 4 25 25 O 1.42900 * 109.47180 * 75.00017 * 24 23 22 26 26 Si 1.86303 * 109.47042 * 194.99978 * 24 23 22 27 27 C 1.36627 * 119.80977 * 0.02562 * 23 22 4 28 28 C 1.38260 * 120.12072 * 0.02562 * 3 2 1 29 29 H 1.08994 * 109.47402 * 300.00153 * 1 2 3 30 30 H 1.08998 * 109.47284 * 60.00324 * 1 2 3 31 31 H 1.09001 * 109.47227 * 179.97438 * 1 2 3 32 32 H 0.96999 * 120.00044 * 0.02562 * 9 7 6 33 33 H 1.08996 * 109.47542 * 180.02562 * 12 10 9 34 34 H 1.08997 * 109.47512 * 300.00175 * 12 10 9 35 35 H 1.08991 * 109.47259 * 179.97438 * 13 12 10 36 36 H 1.08996 * 109.47029 * 300.00528 * 13 12 10 37 37 H 1.09007 * 109.46879 * 180.02562 * 19 14 13 38 38 H 1.08996 * 109.47625 * 300.00032 * 19 14 13 39 39 H 1.09005 * 109.47059 * 179.97438 * 20 19 14 40 40 H 1.09000 * 109.47596 * 60.00227 * 20 19 14 41 41 H 1.07998 * 126.95123 * 180.20873 * 21 6 5 42 42 H 1.09004 * 109.46875 * 314.99855 * 24 23 22 43 43 H 0.96695 * 113.99861 * 59.99798 * 25 24 23 44 44 H 1.48502 * 110.00008 * 58.68011 * 26 24 23 45 45 H 1.48504 * 109.99672 * 180.02562 * 26 24 23 46 46 H 1.08001 * 119.75393 * 179.97438 * 27 23 22 47 47 H 1.07996 * 119.66217 * 0.02562 * 28 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0462 1.2114 0.0000 4 6 3.4387 1.2873 -0.0005 5 8 4.4140 0.3572 -0.0061 6 6 5.6317 0.9386 -0.0014 7 6 6.9131 0.2184 -0.0027 8 8 7.9595 0.8386 0.0015 9 7 6.9286 -1.1294 -0.0028 10 6 8.2056 -1.8472 -0.0047 11 1 8.9358 -1.2914 0.5837 12 6 8.0106 -3.2367 0.6051 13 6 6.9858 -4.0169 -0.2209 14 6 7.4900 -4.1571 -1.6586 15 1 8.4401 -4.6912 -1.6601 16 7 6.5085 -4.9036 -2.4497 17 8 5.3753 -4.4752 -2.5757 18 8 6.8257 -5.9525 -2.9814 19 6 7.6850 -2.7675 -2.2684 20 6 8.7098 -1.9874 -1.4424 21 6 5.4944 2.2897 -0.0011 22 6 4.0555 2.5509 -0.0011 23 6 3.2766 3.7116 -0.0016 24 6 3.9382 5.0656 -0.0028 25 8 4.4601 5.3396 -1.3045 26 14 2.6865 6.3687 0.4514 27 6 1.9137 3.6151 -0.0011 28 6 1.2957 2.3725 0.0005 29 1 -0.3634 0.5138 0.8899 30 1 -0.3634 0.5138 -0.8900 31 1 -0.3634 -1.0277 -0.0005 32 1 6.0942 -1.6240 -0.0024 33 1 8.9608 -3.7707 0.6041 34 1 7.6514 -3.1370 1.6293 35 1 6.8471 -5.0070 0.2132 36 1 6.0356 -3.4828 -0.2196 37 1 8.0438 -2.8674 -3.2929 38 1 6.7349 -2.2334 -2.2671 39 1 8.8492 -0.9975 -1.8771 40 1 9.6601 -2.5214 -1.4439 41 1 6.2874 3.0229 -0.0010 42 1 4.7508 5.0735 0.7237 43 1 3.7912 5.3483 -2.0026 44 1 2.1129 6.0774 1.7898 45 1 3.3265 7.7088 0.4532 46 1 1.3128 4.5125 -0.0011 47 1 0.2174 2.3119 0.0014 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16623254_6672420.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:45:00 Heat of formation + Delta-G solvation = -72.489935 kcal Electronic energy + Delta-G solvation = -35385.565196 eV Core-core repulsion = 30505.396265 eV Total energy + Delta-G solvation = -4880.168931 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 377.144 amu Computer time = 1.21 seconds Orbital eigenvalues (eV) -43.71912 -43.33942 -41.41351 -40.64175 -39.31036 -39.09959 -37.36536 -37.03255 -35.35416 -33.60888 -32.55578 -32.41553 -31.81739 -30.81429 -28.72458 -27.35883 -26.36081 -25.20073 -24.46345 -23.98235 -23.36247 -22.33335 -21.75353 -20.88162 -19.98367 -19.73222 -19.32093 -19.04943 -18.64475 -18.24299 -17.83338 -17.70911 -17.13883 -17.12068 -16.83694 -16.54866 -16.28134 -16.12786 -15.81914 -15.47380 -15.28524 -14.87723 -14.79095 -14.63912 -14.43366 -14.17021 -14.12818 -13.94975 -13.88051 -13.61272 -13.45251 -13.37492 -12.84567 -12.68332 -12.56599 -12.45113 -12.39691 -12.38205 -12.11094 -11.99879 -11.95931 -11.92832 -11.70890 -11.53824 -10.98191 -10.49002 -10.47058 -9.81654 -9.01836 -5.10457 -0.64047 -0.41965 0.08798 0.65160 0.66102 1.18744 1.25187 1.59413 1.80996 1.93148 1.95729 2.02977 2.37648 2.74995 2.82034 3.13529 3.20812 3.29531 3.38048 3.45838 3.50345 3.59826 3.64441 3.69700 3.79542 3.81632 3.83395 3.93374 4.03887 4.07934 4.09613 4.10635 4.14191 4.38303 4.40679 4.42065 4.46317 4.46913 4.52005 4.56873 4.65960 4.77009 4.79851 4.84530 5.02612 5.07009 5.19169 5.28537 5.36094 5.58069 6.08205 6.22032 6.53439 6.63282 6.79058 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.310 6.310 3 C 0.151 3.849 4 C 0.048 3.952 5 O -0.173 6.173 6 C -0.028 4.028 7 C 0.606 3.394 8 O -0.507 6.507 9 N -0.716 5.716 10 C 0.139 3.861 11 H 0.108 0.892 12 C -0.122 4.122 13 C -0.128 4.128 14 C 0.018 3.982 15 H 0.138 0.862 16 N -0.019 5.019 17 O -0.156 6.156 18 O -0.162 6.162 19 C -0.125 4.125 20 C -0.127 4.127 21 C -0.101 4.101 22 C -0.083 4.083 23 C -0.099 4.099 24 C -0.066 4.066 25 O -0.536 6.536 26 Si 0.686 3.314 27 C -0.087 4.087 28 C -0.178 4.178 29 H 0.060 0.940 30 H 0.062 0.938 31 H 0.106 0.894 32 H 0.408 0.592 33 H 0.094 0.906 34 H 0.093 0.907 35 H 0.089 0.911 36 H 0.090 0.910 37 H 0.084 0.916 38 H 0.092 0.908 39 H 0.091 0.909 40 H 0.087 0.913 41 H 0.174 0.826 42 H 0.114 0.886 43 H 0.379 0.621 44 H -0.255 1.255 45 H -0.252 1.252 46 H 0.141 0.859 47 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.674 0.937 1.650 4.135 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.223 6.223 3 C 0.105 3.895 4 C -0.001 4.001 5 O -0.075 6.075 6 C -0.078 4.078 7 C 0.391 3.609 8 O -0.383 6.383 9 N -0.369 5.369 10 C 0.035 3.965 11 H 0.126 0.874 12 C -0.160 4.160 13 C -0.167 4.167 14 C -0.080 4.080 15 H 0.156 0.844 16 N 0.504 4.496 17 O -0.377 6.377 18 O -0.381 6.381 19 C -0.163 4.163 20 C -0.166 4.166 21 C -0.122 4.122 22 C -0.084 4.084 23 C -0.100 4.100 24 C -0.176 4.176 25 O -0.341 6.341 26 Si 0.587 3.413 27 C -0.105 4.105 28 C -0.196 4.196 29 H 0.079 0.921 30 H 0.080 0.920 31 H 0.124 0.876 32 H 0.245 0.755 33 H 0.112 0.888 34 H 0.111 0.889 35 H 0.107 0.893 36 H 0.109 0.891 37 H 0.103 0.897 38 H 0.110 0.890 39 H 0.109 0.891 40 H 0.106 0.894 41 H 0.191 0.809 42 H 0.131 0.869 43 H 0.226 0.774 44 H -0.179 1.179 45 H -0.177 1.177 46 H 0.158 0.842 47 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges -1.991 1.914 2.983 4.065 hybrid contribution -0.427 -0.771 -0.025 0.882 sum -2.418 1.143 2.958 3.987 Atomic orbital electron populations 1.23203 0.77222 1.04871 1.01791 1.86185 1.22233 1.25565 1.88283 1.17747 0.86492 0.85961 0.99299 1.18781 0.87471 0.86899 1.06935 1.84054 1.12609 1.34701 1.76119 1.21897 0.83942 0.92567 1.09440 1.16612 0.85522 0.82025 0.76712 1.90926 1.30305 1.67426 1.49642 1.46058 1.10281 1.05782 1.74736 1.21131 0.85966 0.92572 0.96797 0.87433 1.21836 1.00285 0.93956 0.99932 1.21920 1.01032 1.03506 0.90204 1.24366 0.93300 0.96559 0.93778 0.84442 1.44896 1.02981 1.01266 1.00419 1.94565 1.06593 1.71448 1.65080 1.94589 1.84378 1.11296 1.47866 1.21895 1.03023 0.90987 1.00435 1.21953 0.98094 1.01920 0.94600 1.22750 0.94839 0.94292 1.00292 1.19398 0.92588 0.92102 1.04356 1.19487 0.92925 0.94444 1.03125 1.25060 1.05469 0.97791 0.89321 1.86538 1.38174 1.93377 1.16013 0.94968 0.83054 0.77807 0.85472 1.20398 0.93086 0.97284 0.99700 1.20994 1.00480 0.90505 1.07668 0.92125 0.91981 0.87558 0.75494 0.88757 0.88863 0.89263 0.89147 0.89721 0.88988 0.89060 0.89439 0.80864 0.86903 0.77386 1.17932 1.17678 0.84175 0.83316 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.07 9.81 101.05 0.99 0.92 16 2 O -0.31 -0.39 10.50 -19.61 -0.21 -0.60 16 3 C 0.15 0.21 6.70 -39.12 -0.26 -0.05 16 4 C 0.05 0.13 7.35 -38.23 -0.28 -0.15 16 5 O -0.17 -0.50 10.28 2.64 0.03 -0.47 16 6 C -0.03 -0.07 7.07 -36.91 -0.26 -0.33 16 7 C 0.61 1.10 7.76 -12.71 -0.10 1.00 16 8 O -0.51 -2.20 16.49 5.23 0.09 -2.12 16 9 N -0.72 0.82 4.23 -55.02 -0.23 0.59 16 10 C 0.14 -0.39 2.78 -67.94 -0.19 -0.58 16 11 H 0.11 -0.21 7.57 -51.93 -0.39 -0.61 16 12 C -0.12 0.57 5.61 -26.73 -0.15 0.42 16 13 C -0.13 0.42 5.13 -26.73 -0.14 0.29 16 14 C 0.02 -0.03 2.88 -67.93 -0.20 -0.23 16 15 H 0.14 -0.48 8.09 -51.93 -0.42 -0.90 16 16 N -0.02 -0.04 3.82 -4.89 -0.02 -0.06 16 17 O -0.16 -0.61 18.50 -29.46 -0.55 -1.15 16 18 O -0.16 -0.68 19.21 -29.46 -0.57 -1.25 16 19 C -0.13 0.25 5.15 -26.73 -0.14 0.11 16 20 C -0.13 0.37 5.60 -26.73 -0.15 0.22 16 21 C -0.10 -0.26 10.68 -37.24 -0.40 -0.65 16 22 C -0.08 -0.19 6.16 -105.21 -0.65 -0.84 16 23 C -0.10 -0.03 5.26 -104.63 -0.55 -0.59 16 24 C -0.07 0.02 2.70 36.00 0.10 0.11 16 25 O -0.54 -0.12 12.88 -35.23 -0.45 -0.57 16 26 Si 0.69 -1.12 29.93 -169.99 -5.09 -6.21 16 27 C -0.09 0.13 8.62 -39.96 -0.34 -0.22 16 28 C -0.18 0.20 9.03 -39.37 -0.36 -0.15 16 29 H 0.06 -0.25 7.66 -51.93 -0.40 -0.64 16 30 H 0.06 -0.26 7.66 -51.93 -0.40 -0.65 16 31 H 0.11 -0.42 8.14 -51.93 -0.42 -0.85 16 32 H 0.41 -0.79 6.58 -40.82 -0.27 -1.05 16 33 H 0.09 -0.56 8.14 -51.93 -0.42 -0.98 16 34 H 0.09 -0.45 8.14 -51.93 -0.42 -0.87 16 35 H 0.09 -0.30 8.14 -51.93 -0.42 -0.72 16 36 H 0.09 -0.25 6.39 -51.93 -0.33 -0.58 16 37 H 0.08 -0.14 8.14 -51.92 -0.42 -0.56 16 38 H 0.09 -0.08 7.49 -51.93 -0.39 -0.47 16 39 H 0.09 -0.11 8.14 -51.93 -0.42 -0.54 16 40 H 0.09 -0.39 8.14 -51.93 -0.42 -0.81 16 41 H 0.17 0.34 8.06 -52.49 -0.42 -0.08 16 42 H 0.11 0.05 7.96 -51.93 -0.41 -0.37 16 43 H 0.38 -1.43 8.70 45.56 0.40 -1.03 16 44 H -0.25 -0.19 7.11 56.52 0.40 0.22 16 45 H -0.25 -0.44 7.11 56.52 0.40 -0.04 16 46 H 0.14 -0.62 5.07 -52.49 -0.27 -0.89 16 47 H 0.15 -0.59 6.26 -52.49 -0.33 -0.92 16 LS Contribution 392.83 15.07 5.92 5.92 Total: 0.00 -10.05 392.83 -9.93 -19.98 By element: Atomic # 1 Polarization: -7.56 SS G_CDS: -5.79 Total: -13.35 kcal Atomic # 6 Polarization: 2.35 SS G_CDS: -3.07 Total: -0.72 kcal Atomic # 7 Polarization: 0.78 SS G_CDS: -0.25 Total: 0.53 kcal Atomic # 8 Polarization: -4.50 SS G_CDS: -1.66 Total: -6.16 kcal Atomic # 14 Polarization: -1.12 SS G_CDS: -5.09 Total: -6.21 kcal Total LS contribution 5.92 Total: 5.92 kcal Total: -10.05 -9.93 -19.98 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16623254_6672420.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -52.509 kcal (2) G-P(sol) polarization free energy of solvation -10.047 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -62.555 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.935 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.981 kcal (6) G-S(sol) free energy of system = (1) + (5) -72.490 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.22 seconds