Wall clock time and date at job start Sun Mar 7 2021 05:32:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 O 1.42904 * 109.47056 * 2 1 4 4 C 1.35901 * 116.99800 * 84.84123 * 3 2 1 5 5 C 1.38731 * 120.05547 * 174.57967 * 4 3 2 6 6 C 1.38147 * 119.94510 * 180.02562 * 5 4 3 7 7 C 1.38259 * 120.05399 * 359.97438 * 6 5 4 8 8 C 1.50706 * 119.94239 * 180.02562 * 7 6 5 9 9 O 1.42900 * 109.47043 * 65.00108 * 8 7 6 10 10 Si 1.86305 * 109.46872 * 185.00277 * 8 7 6 11 11 C 1.38270 * 120.11446 * 0.02731 * 7 6 5 12 12 C 1.38146 * 120.05206 * 359.96809 * 11 7 6 13 13 C 1.50701 * 109.46712 * 240.00544 * 2 1 3 14 14 O 1.21280 * 120.00130 * 120.00168 * 13 2 1 15 15 N 1.34777 * 119.99948 * 299.99537 * 13 2 1 16 16 C 1.46493 * 120.00089 * 180.02562 * 15 13 2 17 17 H 1.08998 * 109.47387 * 324.99823 * 16 15 13 18 18 C 1.53002 * 109.47546 * 85.00019 * 16 15 13 19 19 C 1.52995 * 109.47268 * 180.02562 * 18 16 15 20 20 C 1.53002 * 109.47086 * 299.99559 * 19 18 16 21 21 H 1.09003 * 109.47453 * 300.00535 * 20 19 18 22 22 C 1.50694 * 109.47218 * 180.02562 * 20 19 18 23 23 N 1.30521 * 126.34642 * 144.69188 * 22 20 19 24 24 N 1.28595 * 109.67321 * 179.82355 * 23 22 20 25 25 C 1.30520 * 109.67326 * 0.45329 * 24 23 22 26 26 N 1.35492 * 107.30783 * 359.72304 * 25 24 23 27 27 C 1.53002 * 109.46707 * 60.00097 * 20 19 18 28 28 C 1.52995 * 109.47268 * 299.99792 * 27 20 19 29 29 H 1.09008 * 109.46813 * 299.99476 * 1 2 3 30 30 H 1.08998 * 109.47630 * 59.99506 * 1 2 3 31 31 H 1.08997 * 109.47357 * 180.02562 * 1 2 3 32 32 H 1.08993 * 109.47203 * 120.00286 * 2 1 3 33 33 H 1.08003 * 120.02852 * 0.03597 * 5 4 3 34 34 H 1.08001 * 119.97052 * 180.27565 * 6 5 4 35 35 H 1.08998 * 109.46939 * 304.99912 * 8 7 6 36 36 H 0.96703 * 113.99635 * 60.00453 * 9 8 7 37 37 H 1.48498 * 110.00080 * 58.68405 * 10 8 7 38 38 H 1.48505 * 109.99548 * 179.97438 * 10 8 7 39 39 H 1.08000 * 119.97138 * 180.02562 * 11 7 6 40 40 H 1.08000 * 120.02343 * 179.97438 * 12 11 7 41 41 H 0.97008 * 119.99797 * 0.02562 * 15 13 2 42 42 H 1.09000 * 109.46879 * 300.00359 * 18 16 15 43 43 H 1.08998 * 109.46938 * 59.99529 * 18 16 15 44 44 H 1.09005 * 109.47255 * 180.02562 * 19 18 16 45 45 H 1.08998 * 109.47707 * 59.99778 * 19 18 16 46 46 H 1.07997 * 126.34891 * 179.73352 * 25 24 23 47 47 H 0.96998 * 126.98467 * 180.02562 * 26 25 24 48 48 H 1.09000 * 109.46879 * 179.97438 * 27 20 19 49 49 H 1.08998 * 109.46938 * 60.00484 * 27 20 19 50 50 H 1.08990 * 109.47429 * 300.00082 * 28 27 20 51 51 H 1.09007 * 109.46784 * 179.97438 * 28 27 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0063 1.3473 0.0000 4 6 2.1093 1.9653 1.2060 5 6 2.6695 3.2315 1.2923 6 6 2.7735 3.8573 2.5195 7 6 2.3195 3.2230 3.6610 8 6 2.4337 3.9083 4.9984 9 8 1.6077 5.0743 5.0081 10 14 1.8794 2.7432 6.3424 11 6 1.7607 1.9609 3.5777 12 6 1.6544 1.3309 2.3528 13 6 2.0322 -0.7103 -1.2306 14 8 2.7295 -0.1209 -2.0289 15 7 1.7066 -2.0006 -1.4439 16 6 2.1953 -2.6913 -2.6398 17 1 2.2323 -1.9910 -3.4743 18 6 3.5978 -3.2419 -2.3736 19 6 4.1083 -3.9627 -3.6229 20 6 3.1645 -5.1165 -3.9675 21 1 3.1274 -5.8172 -3.1333 22 6 3.6677 -5.8268 -5.1976 23 7 3.5916 -7.1077 -5.4366 24 7 4.1170 -7.3663 -6.5815 25 6 4.5607 -6.2635 -7.1206 26 7 4.2881 -5.2551 -6.2578 27 6 1.7620 -4.5659 -4.2337 28 6 1.2515 -3.8452 -2.9844 29 1 -0.3633 0.5138 0.8901 30 1 -0.3634 0.5139 -0.8899 31 1 -0.3634 -1.0276 0.0005 32 1 1.8933 -0.5138 0.8899 33 1 3.0238 3.7277 0.4008 34 1 3.2055 4.8449 2.5866 35 1 3.4706 4.1960 5.1717 36 1 0.6695 4.8930 4.8597 37 1 2.7102 1.5126 6.3223 38 1 1.9879 3.4070 7.6664 39 1 1.4064 1.4677 4.4707 40 1 1.2183 0.3450 2.2883 41 1 1.1487 -2.4720 -0.8055 42 1 4.2703 -2.4199 -2.1285 43 1 3.5608 -3.9422 -1.5392 44 1 5.1073 -4.3553 -3.4331 45 1 4.1454 -3.2621 -4.4570 46 1 5.0535 -6.1718 -8.0772 47 1 4.4949 -4.3147 -6.3753 48 1 1.0897 -5.3879 -4.4796 49 1 1.7990 -3.8653 -5.0678 50 1 1.2144 -4.5458 -2.1503 51 1 0.2524 -3.4525 -3.1743 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16624780_10157680.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:32:11 Heat of formation + Delta-G solvation = -4.360661 kcal Electronic energy + Delta-G solvation = -33153.791651 eV Core-core repulsion = 28635.158925 eV Total energy + Delta-G solvation = -4518.632726 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 373.183 amu Computer time = 1.30 seconds Orbital eigenvalues (eV) -44.14108 -41.89001 -40.96662 -39.69307 -38.84590 -37.17956 -35.87224 -34.64385 -33.71128 -32.35165 -32.12920 -31.86114 -31.50065 -29.57369 -26.78968 -25.78796 -24.74373 -24.28626 -23.95827 -23.34276 -22.48170 -22.10818 -21.55849 -20.99118 -19.58958 -19.39718 -18.75791 -18.12547 -17.46279 -16.94039 -16.87034 -16.82269 -16.61884 -16.40033 -16.14075 -15.99895 -15.71838 -15.62284 -15.34586 -15.14144 -15.01148 -14.71184 -14.47263 -14.27538 -14.14278 -13.94487 -13.72468 -13.62004 -13.50729 -13.42639 -13.00508 -12.88062 -12.56853 -12.48674 -12.36898 -12.18743 -12.15028 -12.09037 -11.89736 -11.82970 -11.74501 -11.65281 -11.32648 -10.86611 -10.44284 -10.28721 -10.19733 -10.08372 -9.24678 -5.08680 0.24729 0.25476 0.79577 1.26588 1.35443 1.42768 1.59039 1.75405 1.90806 1.94370 2.36543 2.61956 3.03568 3.25309 3.37459 3.41217 3.45637 3.49573 3.62036 3.63314 3.65331 3.77362 3.78045 3.82633 3.89253 3.96696 4.08215 4.11748 4.15215 4.16336 4.23800 4.30985 4.35731 4.40890 4.44685 4.46180 4.48255 4.56711 4.61803 4.75593 4.78735 4.82526 4.83839 4.84971 4.91123 5.01267 5.06638 5.10126 5.12420 5.20980 5.25838 5.46784 5.64426 6.01820 6.16019 6.31392 6.55987 6.99701 7.74243 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.178 4.178 2 C 0.065 3.935 3 O -0.284 6.284 4 C 0.135 3.865 5 C -0.146 4.146 6 C -0.051 4.051 7 C -0.157 4.157 8 C -0.063 4.063 9 O -0.541 6.541 10 Si 0.684 3.316 11 C -0.074 4.074 12 C -0.208 4.208 13 C 0.520 3.480 14 O -0.511 6.511 15 N -0.723 5.723 16 C 0.145 3.855 17 H 0.091 0.909 18 C -0.128 4.128 19 C -0.115 4.115 20 C -0.003 4.003 21 H 0.110 0.890 22 C 0.185 3.815 23 N -0.290 5.290 24 N -0.296 5.296 25 C 0.155 3.845 26 N -0.581 5.581 27 C -0.107 4.107 28 C -0.125 4.125 29 H 0.079 0.921 30 H 0.077 0.923 31 H 0.080 0.920 32 H 0.101 0.899 33 H 0.135 0.865 34 H 0.134 0.866 35 H 0.112 0.888 36 H 0.379 0.621 37 H -0.258 1.258 38 H -0.255 1.255 39 H 0.130 0.870 40 H 0.133 0.867 41 H 0.402 0.598 42 H 0.075 0.925 43 H 0.072 0.928 44 H 0.075 0.925 45 H 0.065 0.935 46 H 0.223 0.777 47 H 0.429 0.571 48 H 0.081 0.919 49 H 0.067 0.933 50 H 0.077 0.923 51 H 0.078 0.922 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.135 0.324 1.476 4.403 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.235 4.235 2 C 0.005 3.995 3 O -0.196 6.196 4 C 0.090 3.910 5 C -0.165 4.165 6 C -0.069 4.069 7 C -0.158 4.158 8 C -0.174 4.174 9 O -0.346 6.346 10 Si 0.586 3.414 11 C -0.092 4.092 12 C -0.227 4.227 13 C 0.305 3.695 14 O -0.385 6.385 15 N -0.376 5.376 16 C 0.041 3.959 17 H 0.110 0.890 18 C -0.167 4.167 19 C -0.154 4.154 20 C -0.024 4.024 21 H 0.128 0.872 22 C -0.084 4.084 23 N -0.131 5.131 24 N -0.135 5.135 25 C -0.135 4.135 26 N -0.194 5.194 27 C -0.146 4.146 28 C -0.163 4.163 29 H 0.098 0.902 30 H 0.096 0.904 31 H 0.098 0.902 32 H 0.119 0.881 33 H 0.153 0.847 34 H 0.152 0.848 35 H 0.130 0.870 36 H 0.226 0.774 37 H -0.183 1.183 38 H -0.180 1.180 39 H 0.147 0.853 40 H 0.151 0.849 41 H 0.237 0.763 42 H 0.093 0.907 43 H 0.091 0.909 44 H 0.093 0.907 45 H 0.084 0.916 46 H 0.239 0.761 47 H 0.269 0.731 48 H 0.099 0.901 49 H 0.086 0.914 50 H 0.095 0.905 51 H 0.097 0.903 Dipole moment (debyes) X Y Z Total from point charges -3.119 -0.958 1.713 3.685 hybrid contribution 0.702 1.625 -0.383 1.811 sum -2.417 0.667 1.329 2.838 Atomic orbital electron populations 1.22370 0.92245 1.03946 1.04986 1.22207 0.95968 0.83298 0.98010 1.86227 1.80919 1.25404 1.27059 1.19073 0.95132 0.92839 0.83957 1.20542 1.03280 0.93624 0.99020 1.20864 0.96126 0.99294 0.90582 1.20249 1.03499 0.95698 0.96356 1.24979 0.98327 0.94136 0.99986 1.86510 1.22111 1.30871 1.95110 0.94893 0.90880 0.77942 0.77655 1.20766 0.97363 0.94117 0.96908 1.21205 1.07280 1.01801 0.92384 1.20091 0.80533 0.81918 0.86999 1.90773 1.36196 1.65734 1.45791 1.45920 1.54247 1.11404 1.26073 1.21063 0.93233 0.93831 0.87776 0.89049 1.21905 0.96442 1.00523 0.97841 1.21600 0.99051 0.96166 0.98544 1.19780 0.94986 0.96250 0.91377 0.87154 1.24851 0.99678 0.91334 0.92547 1.74304 1.18384 1.10850 1.09569 1.74308 1.12800 1.23340 1.03076 1.26591 1.03864 0.83941 0.99058 1.44139 1.45993 1.12602 1.16638 1.21529 0.94833 1.00438 0.97786 1.21805 0.99109 0.96725 0.98672 0.90164 0.90436 0.90163 0.88116 0.84699 0.84831 0.87019 0.77411 1.18336 1.17964 0.85300 0.84897 0.76304 0.90655 0.90891 0.90652 0.91636 0.76098 0.73113 0.90055 0.91424 0.90478 0.90348 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.66 9.07 37.16 0.34 0.99 16 2 C 0.07 -0.09 2.65 -27.88 -0.07 -0.17 16 3 O -0.28 -0.58 9.33 -39.34 -0.37 -0.95 16 4 C 0.14 0.15 6.60 -39.22 -0.26 -0.11 16 5 C -0.15 -0.19 9.99 -39.43 -0.39 -0.59 16 6 C -0.05 -0.03 9.68 -39.61 -0.38 -0.41 16 7 C -0.16 0.02 5.35 -104.60 -0.56 -0.54 16 8 C -0.06 0.03 2.80 36.01 0.10 0.13 16 9 O -0.54 -0.03 12.83 -35.23 -0.45 -0.48 16 10 Si 0.68 -0.98 29.80 -169.99 -5.07 -6.05 16 11 C -0.07 0.08 8.66 -39.60 -0.34 -0.26 16 12 C -0.21 0.20 8.24 -39.43 -0.32 -0.13 16 13 C 0.52 0.09 7.20 -10.98 -0.08 0.01 16 14 O -0.51 -2.51 16.16 -14.35 -0.23 -2.75 16 15 N -0.72 2.36 4.97 -53.81 -0.27 2.09 16 16 C 0.15 -0.43 2.45 -67.93 -0.17 -0.60 16 17 H 0.09 -0.09 7.58 -51.93 -0.39 -0.49 16 18 C -0.13 0.36 5.49 -26.73 -0.15 0.21 16 19 C -0.11 0.37 4.97 -26.73 -0.13 0.24 16 20 C 0.00 0.01 2.66 -91.77 -0.24 -0.24 16 21 H 0.11 -0.25 8.14 -51.93 -0.42 -0.68 16 22 C 0.19 0.07 6.99 -154.98 -1.08 -1.02 16 23 N -0.29 -1.30 12.21 32.80 0.40 -0.89 16 24 N -0.30 -1.32 12.21 29.69 0.36 -0.96 16 25 C 0.15 -0.04 13.19 -89.95 -1.19 -1.23 16 26 N -0.58 1.09 5.96 -11.36 -0.07 1.03 16 27 C -0.11 0.36 5.19 -26.73 -0.14 0.22 16 28 C -0.13 0.56 5.39 -26.73 -0.14 0.42 16 29 H 0.08 -0.32 6.90 -51.92 -0.36 -0.68 16 30 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 31 H 0.08 -0.50 7.56 -51.93 -0.39 -0.89 16 32 H 0.10 -0.36 6.32 -51.93 -0.33 -0.69 16 33 H 0.14 0.12 8.06 -52.48 -0.42 -0.30 16 34 H 0.13 -0.02 8.06 -52.49 -0.42 -0.44 16 35 H 0.11 0.00 7.96 -51.93 -0.41 -0.41 16 36 H 0.38 -1.45 8.70 45.56 0.40 -1.05 16 37 H -0.26 -0.23 7.11 56.52 0.40 0.17 16 38 H -0.25 -0.50 7.11 56.52 0.40 -0.10 16 39 H 0.13 -0.43 4.90 -52.49 -0.26 -0.69 16 40 H 0.13 -0.47 5.43 -52.49 -0.28 -0.75 16 41 H 0.40 -2.50 8.02 -40.82 -0.33 -2.82 16 42 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 43 H 0.07 -0.25 8.14 -51.93 -0.42 -0.67 16 44 H 0.07 -0.21 8.14 -51.93 -0.42 -0.63 16 45 H 0.06 -0.25 7.52 -51.93 -0.39 -0.64 16 46 H 0.22 -1.01 8.06 -52.49 -0.42 -1.43 16 47 H 0.43 -2.21 8.29 -40.82 -0.34 -2.55 16 48 H 0.08 -0.19 8.14 -51.93 -0.42 -0.62 16 49 H 0.07 -0.22 8.14 -51.93 -0.42 -0.65 16 50 H 0.08 -0.41 8.14 -51.93 -0.42 -0.83 16 51 H 0.08 -0.36 8.14 -51.92 -0.42 -0.79 16 LS Contribution 410.87 15.07 6.19 6.19 Total: 0.00 -13.42 410.87 -12.08 -25.49 By element: Atomic # 1 Polarization: -12.32 SS G_CDS: -7.36 Total: -19.68 kcal Atomic # 6 Polarization: 2.17 SS G_CDS: -5.22 Total: -3.05 kcal Atomic # 7 Polarization: 0.84 SS G_CDS: 0.43 Total: 1.27 kcal Atomic # 8 Polarization: -3.12 SS G_CDS: -1.05 Total: -4.17 kcal Atomic # 14 Polarization: -0.98 SS G_CDS: -5.07 Total: -6.05 kcal Total LS contribution 6.19 Total: 6.19 kcal Total: -13.42 -12.08 -25.49 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16624780_10157680.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 21.131 kcal (2) G-P(sol) polarization free energy of solvation -13.415 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 7.716 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.076 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.492 kcal (6) G-S(sol) free energy of system = (1) + (5) -4.361 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.30 seconds