Wall clock time and date at job start Sun Mar 7 2021 05:32:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86303 * 109.47036 * 2 1 4 4 C 1.50702 * 109.47388 * 119.99817 * 2 1 3 5 5 C 1.35448 * 126.06688 * 245.02843 * 4 2 1 6 6 N 1.35538 * 108.87235 * 179.74394 * 5 4 2 7 7 C 1.37647 * 108.64077 * 0.37753 * 6 5 4 8 8 C 1.46684 * 126.23513 * 179.88917 * 7 6 5 9 9 O 1.21690 * 120.00041 * 179.69143 * 8 7 6 10 10 N 1.34778 * 119.99666 * 359.68632 * 8 7 6 11 11 C 1.46499 * 119.99771 * 179.97438 * 10 8 7 12 12 H 1.08992 * 109.47397 * 325.00275 * 11 10 8 13 13 C 1.53002 * 109.46799 * 85.00174 * 11 10 8 14 14 C 1.52997 * 109.46817 * 179.97438 * 13 11 10 15 15 C 1.53005 * 109.47452 * 300.00239 * 14 13 11 16 16 H 1.09002 * 109.46935 * 300.00125 * 15 14 13 17 17 C 1.50703 * 109.47304 * 180.02562 * 15 14 13 18 18 N 1.30522 * 126.34537 * 94.68826 * 17 15 14 19 19 N 1.28597 * 109.66981 * 179.82632 * 18 17 15 20 20 C 1.30517 * 109.66921 * 0.44387 * 19 18 17 21 21 N 1.35486 * 126.34362 * 274.99699 * 17 15 14 22 22 C 1.52999 * 109.47159 * 59.99536 * 15 14 13 23 23 C 1.52997 * 109.47317 * 300.00546 * 22 15 14 24 24 C 1.37880 * 107.53436 * 359.62446 * 7 6 5 25 25 H 0.96703 * 114.00023 * 300.00092 * 1 2 3 26 26 H 1.08994 * 109.47314 * 240.00153 * 2 1 3 27 27 H 1.48499 * 109.99809 * 299.99908 * 3 2 1 28 28 H 1.48500 * 109.99870 * 61.31832 * 3 2 1 29 29 H 1.08004 * 125.56846 * 359.93656 * 5 4 2 30 30 H 0.96993 * 125.68098 * 180.25983 * 6 5 4 31 31 H 0.97006 * 119.99662 * 0.02562 * 10 8 7 32 32 H 1.08993 * 109.47662 * 299.99952 * 13 11 10 33 33 H 1.09002 * 109.47075 * 60.00457 * 13 11 10 34 34 H 1.09002 * 109.47153 * 60.00231 * 14 13 11 35 35 H 1.09001 * 109.47289 * 180.02562 * 14 13 11 36 36 H 1.08000 * 126.33858 * 179.72911 * 20 19 18 37 37 H 0.97001 * 126.98562 * 0.02562 * 21 17 15 38 38 H 1.08996 * 109.46929 * 179.97438 * 22 15 14 39 39 H 1.09002 * 109.46716 * 60.00455 * 22 15 14 40 40 H 1.09002 * 109.47153 * 299.99641 * 23 22 15 41 41 H 1.09001 * 109.46832 * 179.97438 * 23 22 15 42 42 H 1.08004 * 126.45553 * 180.25962 * 24 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 2.6330 -0.1496 2.2444 6 7 2.9003 -1.1015 3.1715 7 6 2.3684 -2.2960 2.7417 8 6 2.4357 -3.5795 3.4486 9 8 1.9184 -4.5688 2.9643 10 7 3.0707 -3.6631 4.6345 11 6 3.1375 -4.9448 5.3409 12 1 2.2148 -5.5003 5.1737 13 6 4.3235 -5.7557 4.8148 14 6 4.3936 -7.0941 5.5529 15 6 4.5730 -6.8414 7.0512 16 1 5.4957 -6.2857 7.2180 17 6 4.6427 -8.1597 7.7782 18 7 5.7283 -8.8072 8.1034 19 7 5.4169 -9.8932 8.7177 20 6 4.1184 -9.9924 8.8038 21 7 3.5900 -8.8951 8.2100 22 6 3.3871 -6.0304 7.5772 23 6 3.3169 -4.6921 6.8391 24 6 1.7554 -2.0652 1.5284 25 1 -0.3933 0.4417 0.7651 26 1 1.7923 -0.5138 -0.8899 27 1 1.5615 2.4679 -1.2085 28 1 1.5878 2.4586 1.2242 29 1 2.9284 0.8874 2.3057 30 1 3.3870 -0.9642 3.9992 31 1 3.4828 -2.8743 5.0206 32 1 4.1959 -5.9354 3.7473 33 1 5.2463 -5.2002 4.9820 34 1 3.4709 -7.6498 5.3861 35 1 5.2388 -7.6717 5.1785 36 1 3.5673 -10.7997 9.2631 37 1 2.6491 -8.6801 8.1134 38 1 3.5147 -5.8508 8.6447 39 1 2.4643 -6.5861 7.4104 40 1 4.2397 -4.1363 7.0059 41 1 2.4718 -4.1145 7.2136 42 1 1.2367 -2.7935 0.9225 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16624780_10543058.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:32:15 Heat of formation + Delta-G solvation = 48.228933 kcal Electronic energy + Delta-G solvation = -25871.617127 eV Core-core repulsion = 22047.822516 eV Total energy + Delta-G solvation = -3823.794611 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 318.148 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -44.14285 -42.55164 -40.87414 -39.20849 -37.77576 -35.84922 -34.61226 -32.94885 -32.29307 -32.10958 -30.83531 -29.52632 -26.60781 -25.18431 -24.21825 -23.90695 -23.09714 -22.14656 -21.46610 -21.12051 -20.73884 -19.95410 -19.40194 -17.79516 -17.32950 -17.11014 -16.87347 -16.48172 -16.41185 -16.19454 -15.81769 -15.66487 -15.41357 -15.18492 -14.90684 -14.56871 -14.55463 -14.18860 -13.85322 -13.82525 -13.53655 -13.47035 -12.87095 -12.61440 -12.48322 -12.43368 -12.36330 -11.87757 -11.83142 -11.80390 -11.65949 -11.35359 -11.16269 -10.50769 -10.29643 -10.19284 -10.02110 -9.36968 -4.97932 0.35379 0.79582 1.29397 1.48927 1.56465 1.74112 1.84460 1.91186 1.94942 1.99380 2.31712 3.02329 3.30453 3.38449 3.48383 3.67111 3.69820 3.77507 3.84137 3.86521 3.95277 3.98355 4.08385 4.12735 4.15800 4.30538 4.33462 4.41109 4.46039 4.55906 4.67668 4.69466 4.75622 4.81435 4.87388 4.94945 5.00058 5.06105 5.08911 5.11638 5.27571 5.54159 5.74440 6.01548 6.13982 6.33813 6.51537 7.05540 7.74453 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.041 4.041 3 Si 0.683 3.317 4 C -0.208 4.208 5 C 0.036 3.964 6 N -0.535 5.535 7 C -0.060 4.060 8 C 0.592 3.408 9 O -0.523 6.523 10 N -0.730 5.730 11 C 0.145 3.855 12 H 0.092 0.908 13 C -0.129 4.129 14 C -0.108 4.108 15 C -0.003 4.003 16 H 0.110 0.890 17 C 0.186 3.814 18 N -0.290 5.290 19 N -0.295 5.295 20 C 0.154 3.846 21 N -0.581 5.581 22 C -0.114 4.114 23 C -0.125 4.125 24 C -0.075 4.075 25 H 0.374 0.626 26 H 0.116 0.884 27 H -0.258 1.258 28 H -0.261 1.261 29 H 0.176 0.824 30 H 0.418 0.582 31 H 0.394 0.606 32 H 0.077 0.923 33 H 0.071 0.929 34 H 0.067 0.933 35 H 0.078 0.922 36 H 0.223 0.777 37 H 0.429 0.571 38 H 0.077 0.923 39 H 0.066 0.934 40 H 0.076 0.924 41 H 0.076 0.924 42 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.397 5.245 3.398 6.262 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.336 6.336 2 C -0.151 4.151 3 Si 0.585 3.415 4 C -0.215 4.215 5 C -0.101 4.101 6 N -0.131 5.131 7 C -0.172 4.172 8 C 0.380 3.620 9 O -0.398 6.398 10 N -0.381 5.381 11 C 0.041 3.959 12 H 0.111 0.889 13 C -0.167 4.167 14 C -0.147 4.147 15 C -0.024 4.024 16 H 0.128 0.872 17 C -0.084 4.084 18 N -0.131 5.131 19 N -0.135 5.135 20 C -0.135 4.135 21 N -0.194 5.194 22 C -0.152 4.152 23 C -0.163 4.163 24 C -0.101 4.101 25 H 0.221 0.779 26 H 0.133 0.867 27 H -0.183 1.183 28 H -0.186 1.186 29 H 0.193 0.807 30 H 0.255 0.745 31 H 0.228 0.772 32 H 0.095 0.905 33 H 0.089 0.911 34 H 0.085 0.915 35 H 0.097 0.903 36 H 0.239 0.761 37 H 0.268 0.732 38 H 0.096 0.904 39 H 0.085 0.915 40 H 0.094 0.906 41 H 0.095 0.905 42 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges 0.817 4.596 2.834 5.461 hybrid contribution -2.536 0.579 1.074 2.815 sum -1.719 5.175 3.908 6.709 Atomic orbital electron populations 1.86615 1.18069 1.79852 1.49088 1.24332 0.83359 1.09996 0.97438 0.95377 0.91291 0.74490 0.80378 1.19842 1.07551 0.95116 0.99018 1.21904 1.02918 0.94758 0.90514 1.41920 1.44132 1.07790 1.19295 1.20412 1.11042 0.86052 0.99671 1.17047 0.78004 0.86699 0.80299 1.90880 1.46373 1.36199 1.66329 1.45933 1.57982 1.12347 1.21815 1.21055 1.00057 0.84113 0.90677 0.88949 1.21929 0.98320 0.95439 1.01032 1.21553 1.03245 0.97670 0.92223 1.19783 1.01373 0.87472 0.93765 0.87186 1.24849 0.83738 0.97973 1.01791 1.74308 1.23232 1.02059 1.13498 1.74311 1.10723 1.12815 1.15634 1.26591 0.92734 0.92978 1.01179 1.44128 1.11351 1.18781 1.45148 1.21577 0.97453 0.95682 1.00536 1.21776 1.03353 0.97626 0.93498 1.21237 0.99097 0.95685 0.94072 0.77886 0.86662 1.18289 1.18577 0.80740 0.74452 0.77242 0.90470 0.91061 0.91470 0.90297 0.76091 0.73164 0.90412 0.91528 0.90575 0.90503 0.83200 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.79 12.88 -35.23 -0.45 -1.25 16 2 C -0.04 0.02 3.02 36.01 0.11 0.13 16 3 Si 0.68 -1.35 30.60 -169.99 -5.20 -6.55 16 4 C -0.21 0.08 5.43 -105.02 -0.57 -0.49 16 5 C 0.04 -0.10 10.45 -16.91 -0.18 -0.27 16 6 N -0.54 1.75 5.99 -9.39 -0.06 1.69 16 7 C -0.06 -0.01 7.06 -81.98 -0.58 -0.59 16 8 C 0.59 0.65 7.75 -12.85 -0.10 0.55 16 9 O -0.52 -2.71 16.55 5.20 0.09 -2.62 16 10 N -0.73 1.88 5.07 -55.11 -0.28 1.60 16 11 C 0.15 -0.38 2.45 -67.93 -0.17 -0.55 16 12 H 0.09 -0.07 7.58 -51.93 -0.39 -0.46 16 13 C -0.13 0.26 5.49 -26.73 -0.15 0.12 16 14 C -0.11 0.21 5.19 -26.73 -0.14 0.07 16 15 C 0.00 0.01 2.66 -91.77 -0.24 -0.24 16 16 H 0.11 -0.24 8.14 -51.93 -0.42 -0.66 16 17 C 0.19 0.08 6.99 -154.99 -1.08 -1.00 16 18 N -0.29 -1.35 12.21 32.80 0.40 -0.95 16 19 N -0.30 -1.34 12.21 29.69 0.36 -0.98 16 20 C 0.15 -0.04 13.19 -89.95 -1.19 -1.23 16 21 N -0.58 1.15 5.96 -11.36 -0.07 1.08 16 22 C -0.11 0.50 4.97 -26.73 -0.13 0.36 16 23 C -0.12 0.59 5.39 -26.73 -0.14 0.45 16 24 C -0.07 -0.12 10.59 -39.12 -0.41 -0.53 16 25 H 0.37 -0.56 8.70 45.56 0.40 -0.16 16 26 H 0.12 -0.07 7.96 -51.93 -0.41 -0.49 16 27 H -0.26 -0.49 7.11 56.52 0.40 -0.08 16 28 H -0.26 0.14 7.11 56.52 0.40 0.54 16 29 H 0.18 -0.95 6.21 -52.48 -0.33 -1.28 16 30 H 0.42 -2.80 8.19 -40.82 -0.33 -3.13 16 31 H 0.39 -2.18 7.73 -40.82 -0.32 -2.50 16 32 H 0.08 0.02 8.14 -51.93 -0.42 -0.41 16 33 H 0.07 -0.19 8.14 -51.93 -0.42 -0.62 16 34 H 0.07 -0.12 8.14 -51.93 -0.42 -0.55 16 35 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 36 H 0.22 -1.02 8.06 -52.49 -0.42 -1.44 16 37 H 0.43 -2.33 8.29 -40.82 -0.34 -2.67 16 38 H 0.08 -0.33 8.14 -51.93 -0.42 -0.75 16 39 H 0.07 -0.34 7.52 -51.93 -0.39 -0.73 16 40 H 0.08 -0.42 8.14 -51.93 -0.42 -0.84 16 41 H 0.08 -0.38 8.14 -51.93 -0.42 -0.80 16 42 H 0.15 0.39 8.06 -52.48 -0.42 -0.03 16 LS Contribution 349.74 15.07 5.27 5.27 Total: 0.00 -13.00 349.74 -10.45 -23.46 By element: Atomic # 1 Polarization: -11.99 SS G_CDS: -5.54 Total: -17.53 kcal Atomic # 6 Polarization: 1.75 SS G_CDS: -4.97 Total: -3.22 kcal Atomic # 7 Polarization: 2.08 SS G_CDS: 0.36 Total: 2.44 kcal Atomic # 8 Polarization: -3.50 SS G_CDS: -0.37 Total: -3.87 kcal Atomic # 14 Polarization: -1.35 SS G_CDS: -5.20 Total: -6.55 kcal Total LS contribution 5.27 Total: 5.27 kcal Total: -13.00 -10.45 -23.46 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16624780_10543058.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 71.685 kcal (2) G-P(sol) polarization free energy of solvation -13.004 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 58.681 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.452 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.456 kcal (6) G-S(sol) free energy of system = (1) + (5) 48.229 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds