Wall clock time and date at job start Sun Mar 7 2021 05:32:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46502 * 1 3 3 C 1.37657 * 125.67729 * 2 1 4 4 C 1.46687 * 126.23125 * 359.97016 * 3 2 1 5 5 O 1.21692 * 119.99786 * 5.11087 * 4 3 2 6 6 N 1.34777 * 119.99952 * 185.10839 * 4 3 2 7 7 C 1.46496 * 119.99610 * 185.79948 * 6 4 3 8 8 H 1.09004 * 109.47579 * 34.99926 * 7 6 4 9 9 C 1.53001 * 109.46769 * 154.99780 * 7 6 4 10 10 C 1.53002 * 109.46982 * 179.97438 * 9 7 6 11 11 C 1.53002 * 109.47294 * 300.00026 * 10 9 7 12 12 H 1.08999 * 109.46729 * 300.00031 * 11 10 9 13 13 C 1.50698 * 109.46926 * 179.97438 * 11 10 9 14 14 N 1.30521 * 126.34423 * 94.69245 * 13 11 10 15 15 N 1.28597 * 109.67341 * 179.81851 * 14 13 11 16 16 C 1.30525 * 109.67101 * 0.44973 * 15 14 13 17 17 N 1.35486 * 126.34914 * 274.99906 * 13 11 10 18 18 C 1.52996 * 109.46839 * 60.00191 * 11 10 9 19 19 C 1.53002 * 109.47154 * 274.99588 * 7 6 4 20 20 C 1.37872 * 107.53569 * 179.97438 * 3 2 1 21 21 C 1.39837 * 107.08348 * 359.97438 * 20 3 2 22 22 C 1.35455 * 107.86364 * 359.73884 * 21 20 3 23 23 C 1.50702 * 125.56264 * 180.25715 * 22 21 20 24 24 O 1.42896 * 109.46969 * 150.19592 * 23 22 21 25 25 Si 1.86305 * 109.46946 * 30.19799 * 23 22 21 26 26 H 1.09001 * 109.46713 * 95.91438 * 1 2 3 27 27 H 1.08997 * 109.47309 * 335.91328 * 1 2 3 28 28 H 1.09003 * 109.46639 * 215.91235 * 1 2 3 29 29 H 0.96993 * 119.99548 * 5.79382 * 6 4 3 30 30 H 1.08998 * 109.47403 * 300.00066 * 9 7 6 31 31 H 1.08998 * 109.47609 * 59.99957 * 9 7 6 32 32 H 1.09004 * 109.47225 * 60.00232 * 10 9 7 33 33 H 1.09000 * 109.47152 * 180.02562 * 10 9 7 34 34 H 1.07996 * 126.34626 * 179.72685 * 16 15 14 35 35 H 0.97006 * 126.98350 * 0.02562 * 17 13 11 36 36 H 1.08998 * 109.47857 * 59.99892 * 18 11 10 37 37 H 1.09003 * 109.47187 * 180.02562 * 18 11 10 38 38 H 1.08999 * 109.46729 * 300.00379 * 19 7 6 39 39 H 1.08994 * 109.46612 * 60.00450 * 19 7 6 40 40 H 1.07996 * 126.45721 * 180.02562 * 20 3 2 41 41 H 1.08002 * 126.06481 * 179.97438 * 21 20 3 42 42 H 1.09005 * 109.47185 * 270.19950 * 23 22 21 43 43 H 0.96701 * 113.99914 * 179.97438 * 24 23 22 44 44 H 1.48501 * 109.99657 * 59.99904 * 25 23 22 45 45 H 1.48496 * 109.99679 * 181.31878 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2679 1.1182 0.0000 4 6 1.8123 2.5126 -0.0006 5 8 0.6255 2.7650 0.0927 6 7 2.7082 3.5141 -0.1045 7 6 2.2688 4.9059 0.0223 8 1 1.4616 4.9670 0.7522 9 6 3.4425 5.7709 0.4863 10 6 2.9838 7.2245 0.6181 11 6 2.4848 7.7269 -0.7382 12 1 3.2923 7.6654 -1.4678 13 6 2.0325 9.1585 -0.6081 14 7 2.7471 10.2214 -0.8596 15 7 2.0439 11.2765 -0.6452 16 6 0.8518 10.9348 -0.2380 17 7 0.8106 9.5809 -0.2029 18 6 1.3112 6.8619 -1.2020 19 6 1.7695 5.4086 -1.3337 20 6 3.5780 0.6889 0.0006 21 6 3.5522 -0.7092 0.0015 22 6 2.2555 -1.1008 0.0074 23 6 1.7710 -2.5278 0.0159 24 8 0.5129 -2.5996 0.6897 25 14 3.0115 -3.5996 0.9009 26 1 -0.3633 -0.1059 -1.0222 27 1 -0.3634 0.9381 0.4194 28 1 -0.3633 -0.8324 0.6028 29 1 3.6438 3.3133 -0.2631 30 1 3.7983 5.4127 1.4523 31 1 4.2498 5.7098 -0.2435 32 1 2.1764 7.2860 1.3478 33 1 3.8200 7.8409 0.9482 34 1 0.0474 11.6066 0.0225 35 1 0.0589 9.0267 0.0594 36 1 0.5038 6.9233 -0.4724 37 1 0.9560 7.2195 -2.1685 38 1 2.5768 5.3474 -2.0635 39 1 0.9334 4.7924 -1.6641 40 1 4.4583 1.3145 0.0011 41 1 4.4134 -1.3610 0.0018 42 1 1.6544 -2.8780 -1.0098 43 1 0.1401 -3.4908 0.7328 44 1 3.1794 -3.1323 2.3004 45 1 2.5607 -5.0144 0.8883 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16624780_10803936.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:32:22 Heat of formation + Delta-G solvation = 54.382430 kcal Electronic energy + Delta-G solvation = -28232.859511 eV Core-core repulsion = 24253.794116 eV Total energy + Delta-G solvation = -3979.065394 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 332.164 amu Computer time = 0.92 seconds Orbital eigenvalues (eV) -44.10479 -42.51981 -40.80320 -39.13864 -37.94896 -35.81458 -34.59127 -33.74512 -32.61322 -32.04975 -31.38477 -29.58351 -27.40643 -26.77591 -24.70143 -24.17913 -23.41021 -22.89451 -22.12468 -21.36035 -21.13658 -20.18014 -19.35647 -18.78468 -18.57138 -17.32430 -17.03806 -16.80309 -16.61035 -16.36948 -16.24578 -15.94822 -15.53152 -15.38544 -15.12802 -14.92026 -14.58216 -14.37169 -14.18079 -13.98704 -13.80492 -13.67437 -13.43672 -13.14312 -13.01677 -12.78710 -12.56607 -12.47373 -12.40477 -12.30424 -12.08696 -11.82142 -11.79311 -11.57888 -11.29048 -11.02160 -10.75012 -10.18410 -10.14114 -9.68852 -9.02843 -5.01792 0.43438 0.83268 1.09284 1.52153 1.63888 1.74505 1.79166 1.94412 1.94741 2.36937 2.41699 2.93167 3.10040 3.38646 3.50027 3.60903 3.70132 3.76480 3.82924 3.96883 4.03911 4.06643 4.16544 4.20192 4.23202 4.24181 4.35798 4.39067 4.45092 4.48324 4.51950 4.59733 4.63772 4.83352 4.86098 4.91318 4.91660 4.94578 5.04214 5.09393 5.12521 5.15934 5.19006 5.41669 5.74924 6.03675 6.05248 6.18051 6.22773 6.46684 7.18096 7.77819 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.056 3.944 2 N -0.388 5.388 3 C -0.057 4.057 4 C 0.594 3.406 5 O -0.547 6.547 6 N -0.716 5.716 7 C 0.148 3.852 8 H 0.089 0.911 9 C -0.126 4.126 10 C -0.106 4.106 11 C -0.004 4.004 12 H 0.111 0.889 13 C 0.186 3.814 14 N -0.291 5.291 15 N -0.296 5.296 16 C 0.153 3.847 17 N -0.581 5.581 18 C -0.114 4.114 19 C -0.128 4.128 20 C -0.133 4.133 21 C -0.201 4.201 22 C 0.059 3.941 23 C -0.057 4.057 24 O -0.541 6.541 25 Si 0.715 3.285 26 H 0.069 0.931 27 H 0.103 0.897 28 H 0.105 0.895 29 H 0.404 0.596 30 H 0.078 0.922 31 H 0.077 0.923 32 H 0.066 0.934 33 H 0.081 0.919 34 H 0.222 0.778 35 H 0.429 0.571 36 H 0.064 0.936 37 H 0.074 0.926 38 H 0.072 0.928 39 H 0.076 0.924 40 H 0.148 0.852 41 H 0.154 0.846 42 H 0.082 0.918 43 H 0.384 0.616 44 H -0.253 1.253 45 H -0.259 1.259 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.232 -5.322 -0.313 5.337 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.085 4.085 2 N -0.060 5.060 3 C -0.171 4.171 4 C 0.382 3.618 5 O -0.426 6.426 6 N -0.367 5.367 7 C 0.044 3.956 8 H 0.107 0.893 9 C -0.164 4.164 10 C -0.145 4.145 11 C -0.024 4.024 12 H 0.129 0.871 13 C -0.083 4.083 14 N -0.131 5.131 15 N -0.135 5.135 16 C -0.136 4.136 17 N -0.194 5.194 18 C -0.153 4.153 19 C -0.166 4.166 20 C -0.160 4.160 21 C -0.225 4.225 22 C -0.060 4.060 23 C -0.166 4.166 24 O -0.350 6.350 25 Si 0.613 3.387 26 H 0.088 0.912 27 H 0.121 0.879 28 H 0.123 0.877 29 H 0.240 0.760 30 H 0.097 0.903 31 H 0.096 0.904 32 H 0.085 0.915 33 H 0.099 0.901 34 H 0.239 0.761 35 H 0.269 0.731 36 H 0.083 0.917 37 H 0.093 0.907 38 H 0.091 0.909 39 H 0.094 0.906 40 H 0.166 0.834 41 H 0.172 0.828 42 H 0.100 0.900 43 H 0.233 0.767 44 H -0.177 1.177 45 H -0.184 1.184 Dipole moment (debyes) X Y Z Total from point charges 0.502 -4.004 0.051 4.036 hybrid contribution -2.482 -1.368 0.463 2.872 sum -1.981 -5.372 0.513 5.749 Atomic orbital electron populations 1.22577 0.75614 1.06477 1.03804 1.43729 1.07087 1.04026 1.51161 1.20020 0.90580 0.87471 1.19063 1.16977 0.85496 0.83545 0.75766 1.90774 1.16209 1.84766 1.50850 1.45666 1.11556 1.05472 1.74022 1.21027 0.97542 0.79348 0.97672 0.89308 1.21817 0.97577 0.94178 1.02845 1.21529 1.02013 0.95545 0.95449 1.19793 0.99235 0.83704 0.99706 0.87111 1.24867 0.83169 0.98716 1.01529 1.74305 1.25447 0.94106 1.19284 1.74308 1.01609 1.21612 1.15989 1.26584 1.00282 0.82791 1.03907 1.44138 1.14713 1.08736 1.51803 1.21593 0.96812 0.94812 1.02102 1.21895 1.02210 0.95118 0.97419 1.21264 0.94361 0.95058 1.05290 1.20473 0.94574 0.95308 1.12147 1.19982 0.90638 0.86952 1.08387 1.24602 0.93182 0.97047 1.01744 1.86487 1.34540 1.34344 1.79601 0.94459 0.85803 0.76144 0.82278 0.91216 0.87877 0.87718 0.76042 0.90327 0.90410 0.91498 0.90078 0.76128 0.73139 0.91741 0.90724 0.90910 0.90563 0.83422 0.82837 0.90024 0.76677 1.17662 1.18386 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.12 10.33 59.85 0.62 0.74 16 2 N -0.39 -1.12 3.16 -115.61 -0.37 -1.48 16 3 C -0.06 -0.13 6.89 -81.97 -0.56 -0.70 16 4 C 0.59 1.38 7.73 -12.85 -0.10 1.28 16 5 O -0.55 -2.84 14.18 5.20 0.07 -2.76 16 6 N -0.72 0.81 5.05 -55.11 -0.28 0.53 16 7 C 0.15 -0.27 2.41 -67.93 -0.16 -0.43 16 8 H 0.09 -0.01 7.67 -51.93 -0.40 -0.41 16 9 C -0.13 0.43 5.39 -26.73 -0.14 0.29 16 10 C -0.11 0.28 5.19 -26.73 -0.14 0.14 16 11 C 0.00 0.01 2.66 -91.77 -0.24 -0.24 16 12 H 0.11 -0.18 8.14 -51.93 -0.42 -0.60 16 13 C 0.19 0.16 6.99 -154.99 -1.08 -0.93 16 14 N -0.29 -1.42 12.21 32.79 0.40 -1.02 16 15 N -0.30 -1.42 12.21 29.69 0.36 -1.06 16 16 C 0.15 0.01 13.19 -89.94 -1.19 -1.17 16 17 N -0.58 0.86 5.96 -11.36 -0.07 0.79 16 18 C -0.11 0.30 4.97 -26.76 -0.13 0.17 16 19 C -0.13 0.23 5.49 -26.75 -0.15 0.09 16 20 C -0.13 -0.02 10.35 -39.12 -0.40 -0.42 16 21 C -0.20 0.00 9.37 -39.98 -0.37 -0.37 16 22 C 0.06 0.08 6.17 -81.95 -0.51 -0.42 16 23 C -0.06 0.05 2.98 36.01 0.11 0.16 16 24 O -0.54 0.22 9.80 -35.23 -0.35 -0.12 16 25 Si 0.71 -1.38 31.11 -169.99 -5.29 -6.67 16 26 H 0.07 0.10 8.14 -51.93 -0.42 -0.32 16 27 H 0.10 0.36 5.91 -51.93 -0.31 0.05 16 28 H 0.10 0.18 5.47 -51.93 -0.28 -0.10 16 29 H 0.40 -1.41 7.56 -40.82 -0.31 -1.72 16 30 H 0.08 -0.27 8.14 -51.93 -0.42 -0.69 16 31 H 0.08 -0.33 8.14 -51.93 -0.42 -0.75 16 32 H 0.07 -0.18 8.14 -51.93 -0.42 -0.60 16 33 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 34 H 0.22 -0.94 8.06 -52.49 -0.42 -1.36 16 35 H 0.43 -2.04 8.28 -40.82 -0.34 -2.38 16 36 H 0.06 -0.21 7.52 -51.93 -0.39 -0.60 16 37 H 0.07 -0.16 8.14 -51.93 -0.42 -0.59 16 38 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 39 H 0.08 0.02 8.06 -51.93 -0.42 -0.40 16 40 H 0.15 -0.45 7.49 -52.49 -0.39 -0.84 16 41 H 0.15 -0.48 6.86 -52.49 -0.36 -0.84 16 42 H 0.08 -0.21 7.96 -51.93 -0.41 -0.62 16 43 H 0.38 -1.69 8.74 45.56 0.40 -1.29 16 44 H -0.25 -0.50 7.11 56.52 0.40 -0.10 16 45 H -0.26 0.05 7.11 56.52 0.40 0.46 16 LS Contribution 362.72 15.07 5.47 5.47 Total: 0.00 -12.28 362.72 -10.72 -23.00 By element: Atomic # 1 Polarization: -8.63 SS G_CDS: -6.22 Total: -14.85 kcal Atomic # 6 Polarization: 2.64 SS G_CDS: -4.46 Total: -1.82 kcal Atomic # 7 Polarization: -2.29 SS G_CDS: 0.05 Total: -2.24 kcal Atomic # 8 Polarization: -2.61 SS G_CDS: -0.27 Total: -2.88 kcal Atomic # 14 Polarization: -1.38 SS G_CDS: -5.29 Total: -6.67 kcal Total LS contribution 5.47 Total: 5.47 kcal Total: -12.28 -10.72 -23.00 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16624780_10803936.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 77.383 kcal (2) G-P(sol) polarization free energy of solvation -12.280 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 65.103 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.721 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.001 kcal (6) G-S(sol) free energy of system = (1) + (5) 54.382 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.92 seconds