Wall clock time and date at job start Sun Mar 7 2021 05:32:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42906 * 1 3 3 Si 1.86296 * 109.47141 * 2 1 4 4 C 1.50709 * 109.46750 * 240.00195 * 2 1 3 5 5 C 1.36447 * 120.29026 * 239.99829 * 4 2 1 6 6 C 1.40093 * 119.25198 * 179.74892 * 5 4 2 7 7 C 1.40852 * 132.86674 * 180.25311 * 6 5 4 8 8 C 1.46563 * 126.58203 * 359.96757 * 7 6 5 9 9 O 1.21723 * 120.00060 * 359.97438 * 8 7 6 10 10 N 1.34778 * 120.00369 * 180.02562 * 8 7 6 11 11 C 1.46496 * 120.00096 * 180.02562 * 10 8 7 12 12 H 1.09000 * 109.47385 * 324.99518 * 11 10 8 13 13 C 1.52996 * 109.47141 * 85.00113 * 11 10 8 14 14 C 1.53003 * 109.47178 * 179.97438 * 13 11 10 15 15 C 1.52999 * 109.47215 * 299.99970 * 14 13 11 16 16 H 1.09000 * 109.46533 * 299.99934 * 15 14 13 17 17 C 1.50696 * 109.47312 * 179.97438 * 15 14 13 18 18 N 1.30517 * 126.34635 * 145.02242 * 17 15 14 19 19 N 1.28596 * 109.67565 * 179.97438 * 18 17 15 20 20 C 1.30528 * 109.67169 * 0.02562 * 19 18 17 21 21 N 1.35494 * 126.34479 * 324.70821 * 17 15 14 22 22 C 1.52999 * 109.46973 * 59.99564 * 15 14 13 23 23 C 1.52999 * 109.46814 * 204.99981 * 11 10 8 24 24 C 1.40560 * 106.84022 * 180.02562 * 7 6 5 25 25 N 1.30739 * 108.74445 * 0.02562 * 24 7 6 26 26 N 1.36579 * 120.23015 * 0.25716 * 6 5 4 27 27 C 1.36243 * 120.07969 * 359.97438 * 26 6 5 28 28 C 1.35184 * 120.70506 * 359.97438 * 27 26 6 29 29 H 0.96700 * 113.99859 * 300.00226 * 1 2 3 30 30 H 1.08995 * 109.47160 * 120.00123 * 2 1 3 31 31 H 1.48504 * 110.00030 * 300.00147 * 3 2 1 32 32 H 1.48493 * 110.00386 * 61.32041 * 3 2 1 33 33 H 1.08002 * 120.37857 * 0.03132 * 5 4 2 34 34 H 0.97005 * 119.99502 * 0.02562 * 10 8 7 35 35 H 1.09004 * 109.46859 * 299.99412 * 13 11 10 36 36 H 1.08994 * 109.47764 * 59.99780 * 13 11 10 37 37 H 1.08995 * 109.47404 * 179.97438 * 14 13 11 38 38 H 1.09006 * 109.47008 * 59.99728 * 14 13 11 39 39 H 1.07997 * 126.34598 * 180.02562 * 20 19 18 40 40 H 0.96998 * 126.98087 * 0.04300 * 21 17 15 41 41 H 1.09008 * 109.47261 * 180.02562 * 22 15 14 42 42 H 1.09000 * 109.47189 * 60.00772 * 22 15 14 43 43 H 1.09000 * 109.47285 * 299.99350 * 23 11 10 44 44 H 1.09004 * 109.47490 * 59.99873 * 23 11 10 45 45 H 1.08004 * 125.62931 * 179.97438 * 24 7 6 46 46 H 1.07995 * 119.64905 * 179.97438 * 27 26 6 47 47 H 1.08007 * 119.84081 * 180.02562 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2306 5 6 2.7161 -1.8203 -1.1124 6 6 3.1666 -2.4668 -2.2707 7 6 3.9657 -3.6072 -2.4824 8 6 4.5651 -4.4576 -1.4501 9 8 4.3897 -4.2015 -0.2731 10 7 5.3114 -5.5226 -1.8040 11 6 5.9101 -6.3729 -0.7721 12 1 6.2015 -5.7593 0.0803 13 6 4.8914 -7.4216 -0.3212 14 6 5.5168 -8.3101 0.7560 15 6 6.7516 -9.0108 0.1856 16 1 6.4598 -9.6241 -0.6669 17 6 7.3680 -9.8854 1.2467 18 7 7.9527 -11.0367 1.0567 19 7 8.3629 -11.5049 2.1819 20 6 8.0580 -10.6738 3.1411 21 7 7.4231 -9.6195 2.5742 22 6 7.7702 -7.9621 -0.2654 23 6 7.1450 -7.0736 -1.3421 24 6 4.0790 -3.7725 -3.8736 25 7 3.4097 -2.8183 -4.4660 26 7 2.8266 -1.9858 -3.5030 27 6 2.0465 -0.8741 -3.6107 28 6 1.5996 -0.2348 -2.5065 29 1 -0.3933 0.4417 0.7650 30 1 1.7924 -0.5138 0.8899 31 1 1.5615 2.4679 -1.2085 32 1 1.5880 2.4585 1.2242 33 1 2.9833 -2.1990 -0.1368 34 1 5.4521 -5.7261 -2.7420 35 1 4.0116 -6.9224 0.0849 36 1 4.5999 -8.0352 -1.1736 37 1 4.7910 -9.0569 1.0776 38 1 5.8086 -7.6967 1.6086 39 1 8.2762 -10.8004 4.1912 40 1 7.0761 -8.8350 3.0271 41 1 8.6498 -8.4612 -0.6723 42 1 8.0620 -7.3488 0.5871 43 1 6.8537 -7.6873 -2.1945 44 1 7.8708 -6.3265 -1.6634 45 1 4.6289 -4.5577 -4.3712 46 1 1.7822 -0.4995 -4.5885 47 1 0.9815 0.6451 -2.6081 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16624780_11618758.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:32:26 Heat of formation + Delta-G solvation = 110.957524 kcal Electronic energy + Delta-G solvation = -32337.726339 eV Core-core repulsion = 27911.009892 eV Total energy + Delta-G solvation = -4426.716447 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 369.159 amu Computer time = 1.23 seconds Orbital eigenvalues (eV) -44.08392 -43.28363 -40.86168 -39.40198 -38.97205 -37.44443 -35.61287 -34.52660 -34.26420 -32.44511 -32.15715 -32.00428 -30.53068 -29.28760 -27.30293 -25.28555 -24.59133 -24.17096 -23.57771 -23.21365 -22.81896 -22.03430 -21.31126 -20.81973 -19.33904 -19.18714 -18.59862 -18.06030 -17.65620 -17.05196 -16.91080 -16.82230 -16.75455 -16.34500 -16.14053 -15.90242 -15.67299 -15.62615 -15.16621 -15.13159 -14.74041 -14.52587 -14.19787 -14.10946 -14.06742 -13.73496 -13.39379 -13.30636 -13.04871 -12.78747 -12.74935 -12.44864 -12.36522 -12.28073 -12.13619 -11.93802 -11.78939 -11.76410 -11.57493 -11.52459 -11.25393 -10.88326 -10.75307 -10.31051 -10.14480 -10.02814 -8.76070 -5.10831 -0.57137 -0.11480 0.85296 1.00748 1.04009 1.09834 1.44252 1.75174 1.80781 1.96288 2.03432 2.20880 2.57971 2.93171 3.08854 3.15868 3.40719 3.44439 3.50977 3.54957 3.68989 3.75950 3.82812 3.83903 3.98326 4.01480 4.07348 4.13730 4.21560 4.23128 4.24704 4.27472 4.34723 4.39208 4.50816 4.53475 4.57387 4.68477 4.73924 4.87812 4.90887 4.96105 4.97657 5.08923 5.12923 5.15213 5.17241 5.22327 5.27321 5.54502 5.65434 6.07420 6.22391 6.32030 6.59872 7.38041 7.79745 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.532 6.532 2 C -0.077 4.077 3 Si 0.692 3.308 4 C -0.025 4.025 5 C -0.093 4.093 6 C 0.169 3.831 7 C -0.318 4.318 8 C 0.604 3.396 9 O -0.550 6.550 10 N -0.726 5.726 11 C 0.148 3.852 12 H 0.090 0.910 13 C -0.128 4.128 14 C -0.114 4.114 15 C -0.004 4.004 16 H 0.110 0.890 17 C 0.187 3.813 18 N -0.292 5.292 19 N -0.296 5.296 20 C 0.153 3.847 21 N -0.581 5.581 22 C -0.106 4.106 23 C -0.126 4.126 24 C 0.120 3.880 25 N -0.313 5.313 26 N -0.265 5.265 27 C 0.116 3.884 28 C -0.145 4.145 29 H 0.385 0.615 30 H 0.084 0.916 31 H -0.248 1.248 32 H -0.252 1.252 33 H 0.165 0.835 34 H 0.399 0.601 35 H 0.075 0.925 36 H 0.071 0.929 37 H 0.073 0.927 38 H 0.064 0.936 39 H 0.222 0.778 40 H 0.429 0.571 41 H 0.079 0.921 42 H 0.066 0.934 43 H 0.075 0.925 44 H 0.077 0.923 45 H 0.199 0.801 46 H 0.177 0.823 47 H 0.159 0.841 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.344 5.894 1.635 6.126 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.340 6.340 2 C -0.185 4.185 3 Si 0.590 3.410 4 C -0.030 4.030 5 C -0.112 4.112 6 C 0.048 3.952 7 C -0.332 4.332 8 C 0.393 3.607 9 O -0.429 6.429 10 N -0.377 5.377 11 C 0.044 3.956 12 H 0.108 0.892 13 C -0.166 4.166 14 C -0.153 4.153 15 C -0.024 4.024 16 H 0.128 0.872 17 C -0.082 4.082 18 N -0.132 5.132 19 N -0.136 5.136 20 C -0.136 4.136 21 N -0.194 5.194 22 C -0.145 4.145 23 C -0.164 4.164 24 C -0.062 4.062 25 N -0.133 5.133 26 N -0.029 5.029 27 C -0.010 4.010 28 C -0.166 4.166 29 H 0.234 0.766 30 H 0.102 0.898 31 H -0.171 1.171 32 H -0.176 1.176 33 H 0.182 0.818 34 H 0.233 0.767 35 H 0.094 0.906 36 H 0.089 0.911 37 H 0.092 0.908 38 H 0.083 0.917 39 H 0.239 0.761 40 H 0.269 0.731 41 H 0.098 0.902 42 H 0.085 0.915 43 H 0.094 0.906 44 H 0.096 0.904 45 H 0.215 0.785 46 H 0.194 0.806 47 H 0.177 0.823 Dipole moment (debyes) X Y Z Total from point charges -0.251 5.628 -0.089 5.635 hybrid contribution -1.479 0.809 1.802 2.468 sum -1.730 6.437 1.713 6.882 Atomic orbital electron populations 1.86580 1.16966 1.80331 1.50120 1.24725 0.85041 1.11282 0.97481 0.94471 0.91705 0.73475 0.81356 1.19350 0.95371 0.94204 0.94123 1.20647 0.98518 0.93850 0.98224 1.19231 0.95693 0.94159 0.86085 1.19588 1.16445 1.03651 0.93554 1.16813 0.77297 0.79292 0.87275 1.90771 1.61334 1.72283 1.18539 1.45747 1.53290 1.28644 1.10008 1.20968 0.92145 0.91079 0.91451 0.89162 1.21906 0.98966 0.96971 0.98798 1.21599 0.96294 0.98780 0.98637 1.19793 0.94463 0.94121 0.94062 0.87187 1.24881 1.02481 0.96594 0.84272 1.74302 1.13321 1.07071 1.18514 1.74306 1.19577 1.24675 0.94994 1.26580 0.99027 0.85919 1.02070 1.44135 1.45938 1.20789 1.08512 1.21519 0.97930 0.96108 0.98977 1.21804 0.96710 0.99140 0.98767 1.24067 0.94342 0.95764 0.91980 1.77645 1.18647 1.06248 1.10791 1.46095 1.32159 1.18813 1.05821 1.21567 0.92378 0.85217 1.01847 1.20792 1.02818 1.02554 0.90427 0.76638 0.89809 1.17134 1.17571 0.81799 0.76721 0.90613 0.91058 0.90822 0.91715 0.76145 0.73125 0.90213 0.91480 0.90601 0.90418 0.78489 0.80556 0.82306 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.38 12.76 -35.23 -0.45 -0.07 16 2 C -0.08 0.13 2.81 36.01 0.10 0.23 16 3 Si 0.69 -1.80 31.96 -169.99 -5.43 -7.23 16 4 C -0.02 0.00 4.53 -104.54 -0.47 -0.47 16 5 C -0.09 -0.11 9.35 -39.53 -0.37 -0.48 16 6 C 0.17 0.41 6.76 -84.07 -0.57 -0.16 16 7 C -0.32 -0.54 6.17 -104.68 -0.65 -1.19 16 8 C 0.60 1.05 7.75 -12.90 -0.10 0.95 16 9 O -0.55 -2.52 15.37 5.17 0.08 -2.45 16 10 N -0.73 1.13 5.07 -55.15 -0.28 0.85 16 11 C 0.15 -0.30 2.46 -67.94 -0.17 -0.47 16 12 H 0.09 -0.04 7.57 -51.93 -0.39 -0.43 16 13 C -0.13 0.25 5.49 -26.73 -0.15 0.10 16 14 C -0.11 0.31 4.98 -26.73 -0.13 0.18 16 15 C 0.00 0.01 2.66 -91.77 -0.24 -0.24 16 16 H 0.11 -0.17 8.14 -51.93 -0.42 -0.60 16 17 C 0.19 0.15 6.98 -154.99 -1.08 -0.93 16 18 N -0.29 -1.42 12.21 32.79 0.40 -1.02 16 19 N -0.30 -1.41 12.21 29.69 0.36 -1.05 16 20 C 0.15 0.00 13.19 -89.94 -1.19 -1.18 16 21 N -0.58 0.92 5.96 -11.36 -0.07 0.85 16 22 C -0.11 0.28 5.18 -26.76 -0.14 0.15 16 23 C -0.13 0.44 5.39 -26.76 -0.14 0.30 16 24 C 0.12 0.02 11.44 -17.14 -0.20 -0.17 16 25 N -0.31 -0.75 12.57 30.75 0.39 -0.37 16 26 N -0.26 -0.55 3.86 -10.55 -0.04 -0.59 16 27 C 0.12 -0.04 11.17 -16.68 -0.19 -0.22 16 28 C -0.14 0.11 8.67 -39.95 -0.35 -0.24 16 29 H 0.39 -1.77 8.74 45.56 0.40 -1.38 16 30 H 0.08 -0.25 7.71 -51.93 -0.40 -0.65 16 31 H -0.25 0.07 7.06 56.52 0.40 0.47 16 32 H -0.25 0.17 7.11 56.52 0.40 0.57 16 33 H 0.16 0.17 7.01 -52.49 -0.37 -0.20 16 34 H 0.40 -1.63 7.52 -40.82 -0.31 -1.93 16 35 H 0.08 0.01 8.14 -51.93 -0.42 -0.42 16 36 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 37 H 0.07 -0.16 8.14 -51.93 -0.42 -0.59 16 38 H 0.06 -0.22 7.52 -51.93 -0.39 -0.62 16 39 H 0.22 -0.96 8.06 -52.49 -0.42 -1.38 16 40 H 0.43 -2.11 8.29 -40.82 -0.34 -2.45 16 41 H 0.08 -0.13 8.14 -51.92 -0.42 -0.56 16 42 H 0.07 -0.19 8.14 -51.93 -0.42 -0.61 16 43 H 0.08 -0.32 8.14 -51.93 -0.42 -0.74 16 44 H 0.08 -0.28 8.14 -51.93 -0.42 -0.70 16 45 H 0.20 -0.82 7.46 -52.48 -0.39 -1.21 16 46 H 0.18 -0.53 8.06 -52.49 -0.42 -0.95 16 47 H 0.16 -0.36 7.51 -52.48 -0.39 -0.75 16 LS Contribution 391.70 15.07 5.90 5.90 Total: 0.00 -13.54 391.70 -11.18 -24.71 By element: Atomic # 1 Polarization: -9.68 SS G_CDS: -6.01 Total: -15.70 kcal Atomic # 6 Polarization: 2.18 SS G_CDS: -6.03 Total: -3.84 kcal Atomic # 7 Polarization: -2.09 SS G_CDS: 0.76 Total: -1.33 kcal Atomic # 8 Polarization: -2.14 SS G_CDS: -0.37 Total: -2.51 kcal Atomic # 14 Polarization: -1.80 SS G_CDS: -5.43 Total: -7.23 kcal Total LS contribution 5.90 Total: 5.90 kcal Total: -13.54 -11.18 -24.71 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16624780_11618758.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 135.671 kcal (2) G-P(sol) polarization free energy of solvation -13.537 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 122.135 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.177 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.714 kcal (6) G-S(sol) free energy of system = (1) + (5) 110.958 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.23 seconds