Wall clock time and date at job start Sun Mar 7 2021 05:32:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 C 1.35448 * 125.56265 * 2 1 4 4 C 1.50695 * 126.07035 * 0.02562 * 3 2 1 5 5 O 1.42900 * 109.47325 * 210.02489 * 4 3 2 6 6 Si 1.86300 * 109.47389 * 330.03045 * 4 3 2 7 7 C 1.39843 * 107.86189 * 180.28440 * 3 2 1 8 8 C 1.50701 * 126.45747 * 179.73812 * 7 3 2 9 9 C 1.37873 * 107.08550 * 359.56996 * 7 3 2 10 10 C 1.46678 * 126.23180 * 180.12057 * 9 7 3 11 11 O 1.21690 * 120.00162 * 0.33533 * 10 9 7 12 12 N 1.34773 * 119.99632 * 180.33317 * 10 9 7 13 13 C 1.46502 * 119.99932 * 180.02562 * 12 10 9 14 14 H 1.08998 * 109.47381 * 34.99639 * 13 12 10 15 15 C 1.53003 * 109.47432 * 155.00075 * 13 12 10 16 16 C 1.52996 * 109.47207 * 179.97438 * 15 13 12 17 17 C 1.52997 * 109.47264 * 300.00286 * 16 15 13 18 18 H 1.09003 * 109.46904 * 299.99535 * 17 16 15 19 19 C 1.50699 * 109.47297 * 180.02562 * 17 16 15 20 20 N 1.30521 * 126.34640 * 95.01526 * 19 17 16 21 21 N 1.28605 * 109.67000 * 179.97438 * 20 19 17 22 22 C 1.30518 * 109.67395 * 0.02562 * 21 20 19 23 23 N 1.35498 * 126.34392 * 274.71214 * 19 17 16 24 24 C 1.52999 * 109.47581 * 59.99791 * 17 16 15 25 25 C 1.53004 * 109.46898 * 300.00125 * 24 17 16 26 26 N 1.35529 * 125.56312 * 180.02562 * 2 1 3 27 27 H 1.08998 * 109.47308 * 90.00109 * 1 2 3 28 28 H 1.08999 * 109.47263 * 210.00654 * 1 2 3 29 29 H 1.09005 * 109.47396 * 330.00731 * 1 2 3 30 30 H 1.09004 * 109.46897 * 90.03001 * 4 3 2 31 31 H 0.96702 * 113.99767 * 60.00779 * 5 4 3 32 32 H 1.48498 * 109.99998 * 179.97438 * 6 4 3 33 33 H 1.48498 * 109.99919 * 301.31690 * 6 4 3 34 34 H 1.09001 * 109.47227 * 89.99258 * 8 7 3 35 35 H 1.08995 * 109.47268 * 209.99460 * 8 7 3 36 36 H 1.09004 * 109.47060 * 329.99409 * 8 7 3 37 37 H 0.97000 * 120.00342 * 0.02562 * 12 10 9 38 38 H 1.09002 * 109.46746 * 300.00107 * 15 13 12 39 39 H 1.08997 * 109.46716 * 59.99659 * 15 13 12 40 40 H 1.09003 * 109.46781 * 59.99897 * 16 15 13 41 41 H 1.08992 * 109.46950 * 179.97438 * 16 15 13 42 42 H 1.07997 * 126.34522 * 180.02562 * 22 21 20 43 43 H 0.96993 * 126.97942 * 0.03432 * 23 19 17 44 44 H 1.09001 * 109.46732 * 59.99722 * 24 17 16 45 45 H 1.08997 * 109.47419 * 180.02562 * 24 17 16 46 46 H 1.08998 * 109.47491 * 300.00025 * 25 24 17 47 47 H 1.08996 * 109.47158 * 179.97438 * 25 24 17 48 48 H 0.97001 * 125.68215 * 359.96254 * 26 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2947 1.1018 0.0000 4 6 1.8199 2.5320 0.0005 5 8 2.7766 3.3519 -0.6737 6 14 0.1798 2.6422 -0.8762 7 6 3.6269 0.6767 -0.0066 8 6 4.8486 1.5591 -0.0145 9 6 3.6122 -0.7020 -0.0006 10 6 4.7860 -1.5816 -0.0018 11 8 5.9049 -1.1031 -0.0024 12 7 4.6252 -2.9197 -0.0022 13 6 5.7976 -3.7982 -0.0028 14 1 6.5934 -3.3427 0.5865 15 6 5.4219 -5.1505 0.6065 16 6 6.6461 -6.0682 0.6052 17 6 7.1286 -6.2729 -0.8321 18 1 6.3326 -6.7283 -1.4212 19 6 8.3340 -7.1773 -0.8334 20 7 8.3314 -8.4695 -1.0171 21 7 9.5350 -8.9181 -0.9544 22 6 10.3600 -7.9326 -0.7274 23 7 9.6221 -6.7988 -0.6498 24 6 7.5043 -4.9207 -1.4415 25 6 6.2801 -4.0030 -1.4403 26 7 2.2952 -1.1025 -0.0005 27 1 -0.3634 0.0000 -1.0276 28 1 -0.3634 -0.8899 0.5139 29 1 -0.3634 0.8901 0.5137 30 1 1.7063 2.8767 1.0284 31 1 2.9284 3.1021 -1.5955 32 1 -0.2996 4.0477 -0.8820 33 1 0.3141 2.1453 -2.2691 34 1 5.1486 1.7735 1.0112 35 1 5.6614 1.0497 -0.5319 36 1 4.6192 2.4925 -0.5286 37 1 3.7334 -3.3011 -0.0021 38 1 5.0777 -5.0046 1.6304 39 1 4.6262 -5.6060 0.0171 40 1 7.4421 -5.6128 1.1944 41 1 6.3785 -7.0313 1.0397 42 1 11.4327 -8.0064 -0.6256 43 1 9.9491 -5.8994 -0.4923 44 1 8.3003 -4.4653 -0.8523 45 1 7.8477 -5.0664 -2.4656 46 1 5.4840 -4.4583 -2.0293 47 1 6.5478 -3.0395 -1.8740 48 1 1.9833 -2.0210 -0.0004 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16624780_12297754.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:32:30 Heat of formation + Delta-G solvation = 40.347071 kcal Electronic energy + Delta-G solvation = -30381.661921 eV Core-core repulsion = 26246.450288 eV Total energy + Delta-G solvation = -4135.211632 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 346.179 amu Computer time = 1.14 seconds Orbital eigenvalues (eV) -44.13740 -42.71420 -40.88218 -39.20379 -37.87018 -35.85815 -34.61128 -33.68502 -33.34679 -32.28498 -32.11627 -29.82106 -29.35768 -27.33696 -26.34113 -24.71414 -24.22120 -23.41682 -22.50645 -21.99451 -21.32509 -20.73411 -20.32173 -19.41231 -19.30541 -17.77986 -17.24904 -16.89032 -16.76373 -16.62439 -16.41633 -16.26071 -15.89816 -15.63348 -15.45024 -15.14320 -14.99139 -14.73894 -14.41193 -14.17165 -14.12009 -14.05048 -13.77827 -13.69361 -13.50086 -13.26520 -13.21051 -12.87348 -12.55821 -12.52449 -12.46573 -12.34096 -12.28236 -11.88670 -11.82780 -11.79056 -11.63905 -11.32817 -11.02660 -10.47135 -10.26460 -10.19334 -9.52813 -9.01692 -4.83242 0.37498 0.79875 1.19112 1.64470 1.65910 1.75102 1.88167 1.90983 1.96950 2.07343 2.34751 3.04820 3.32186 3.39819 3.43416 3.60193 3.63820 3.73459 3.79393 3.90282 3.94765 3.97893 3.99616 4.09771 4.14153 4.17244 4.28395 4.31438 4.38504 4.42491 4.46658 4.57361 4.62023 4.68500 4.70703 4.76297 4.80236 4.85183 4.86306 4.90920 5.03078 5.07692 5.10785 5.11939 5.27354 5.38548 5.45440 5.69584 5.91374 6.02162 6.23522 6.39626 6.53347 7.11622 7.74382 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.103 4.103 2 C 0.067 3.933 3 C -0.210 4.210 4 C -0.034 4.034 5 O -0.528 6.528 6 Si 0.653 3.347 7 C -0.041 4.041 8 C -0.100 4.100 9 C -0.068 4.068 10 C 0.593 3.407 11 O -0.522 6.522 12 N -0.731 5.731 13 C 0.146 3.854 14 H 0.092 0.908 15 C -0.126 4.126 16 C -0.106 4.106 17 C -0.003 4.003 18 H 0.110 0.890 19 C 0.186 3.814 20 N -0.291 5.291 21 N -0.296 5.296 22 C 0.155 3.845 23 N -0.581 5.581 24 C -0.115 4.115 25 C -0.127 4.127 26 N -0.535 5.535 27 H 0.088 0.912 28 H 0.087 0.913 29 H 0.102 0.898 30 H 0.112 0.888 31 H 0.374 0.626 32 H -0.255 1.255 33 H -0.261 1.261 34 H 0.066 0.934 35 H 0.075 0.925 36 H 0.081 0.919 37 H 0.393 0.607 38 H 0.077 0.923 39 H 0.074 0.926 40 H 0.067 0.933 41 H 0.080 0.920 42 H 0.223 0.777 43 H 0.429 0.571 44 H 0.065 0.935 45 H 0.075 0.925 46 H 0.070 0.930 47 H 0.076 0.924 48 H 0.416 0.584 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.541 0.168 1.559 4.804 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.159 4.159 2 C -0.052 4.052 3 C -0.217 4.217 4 C -0.144 4.144 5 O -0.334 6.334 6 Si 0.554 3.446 7 C -0.049 4.049 8 C -0.157 4.157 9 C -0.180 4.180 10 C 0.381 3.619 11 O -0.398 6.398 12 N -0.382 5.382 13 C 0.042 3.958 14 H 0.110 0.890 15 C -0.164 4.164 16 C -0.145 4.145 17 C -0.024 4.024 18 H 0.128 0.872 19 C -0.084 4.084 20 N -0.132 5.132 21 N -0.135 5.135 22 C -0.135 4.135 23 N -0.194 5.194 24 C -0.153 4.153 25 C -0.166 4.166 26 N -0.132 5.132 27 H 0.106 0.894 28 H 0.106 0.894 29 H 0.120 0.880 30 H 0.130 0.870 31 H 0.222 0.778 32 H -0.180 1.180 33 H -0.185 1.185 34 H 0.084 0.916 35 H 0.093 0.907 36 H 0.100 0.900 37 H 0.227 0.773 38 H 0.095 0.905 39 H 0.093 0.907 40 H 0.086 0.914 41 H 0.099 0.901 42 H 0.239 0.761 43 H 0.269 0.731 44 H 0.084 0.916 45 H 0.093 0.907 46 H 0.089 0.911 47 H 0.094 0.906 48 H 0.253 0.747 Dipole moment (debyes) X Y Z Total from point charges -4.672 -0.621 1.177 4.858 hybrid contribution 1.265 1.084 -0.375 1.707 sum -3.407 0.462 0.802 3.530 Atomic orbital electron populations 1.20422 0.87594 1.03721 1.04176 1.20154 0.93420 0.85761 1.05822 1.19550 0.92946 0.94847 1.14389 1.24248 1.01125 0.86808 1.02258 1.86554 1.61021 1.57069 1.28724 0.95552 0.82203 0.83719 0.83137 1.19804 0.94861 0.90688 0.99542 1.20559 0.93822 0.98589 1.02706 1.20102 0.82753 0.94107 1.21009 1.17007 0.87573 0.81204 0.76077 1.90837 1.24155 1.74910 1.49864 1.45940 1.09661 1.05787 1.76804 1.21036 0.88310 0.89696 0.96778 0.88962 1.21809 0.98539 0.93983 1.02035 1.21522 0.97660 1.00584 0.94778 1.19777 0.91529 0.92481 0.98602 0.87223 1.24847 0.86265 0.93945 1.03303 1.74306 1.14273 1.06061 1.18516 1.74309 0.96022 1.25790 1.17402 1.26592 1.00923 0.81850 1.04094 1.44139 1.07717 1.12208 1.55307 1.21601 0.98504 0.93554 1.01687 1.21899 0.97589 1.00350 0.96756 1.41737 1.05316 1.08220 1.57908 0.89385 0.89392 0.88008 0.87000 0.77802 1.17985 1.18529 0.91569 0.90667 0.90031 0.77314 0.90468 0.90684 0.91388 0.90106 0.76088 0.73104 0.91601 0.90676 0.91104 0.90556 0.74678 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.56 8.21 36.00 0.30 0.85 16 2 C 0.07 -0.13 6.84 -81.96 -0.56 -0.69 16 3 C -0.21 -0.10 5.38 -105.02 -0.57 -0.67 16 4 C -0.03 0.00 3.03 36.00 0.11 0.11 16 5 O -0.53 -0.83 10.19 -35.23 -0.36 -1.19 16 6 Si 0.65 -0.78 26.76 -169.99 -4.55 -5.33 16 7 C -0.04 -0.09 6.15 -104.15 -0.64 -0.73 16 8 C -0.10 -0.28 9.50 36.01 0.34 0.06 16 9 C -0.07 -0.06 7.06 -81.98 -0.58 -0.64 16 10 C 0.59 0.85 7.75 -12.85 -0.10 0.75 16 11 O -0.52 -2.52 14.47 5.20 0.08 -2.44 16 12 N -0.73 1.55 5.07 -55.11 -0.28 1.27 16 13 C 0.15 -0.34 2.46 -67.92 -0.17 -0.51 16 14 H 0.09 -0.05 7.58 -51.93 -0.39 -0.44 16 15 C -0.13 0.49 5.39 -26.73 -0.14 0.35 16 16 C -0.11 0.31 5.19 -26.73 -0.14 0.18 16 17 C 0.00 0.01 2.66 -91.77 -0.24 -0.24 16 18 H 0.11 -0.21 8.14 -51.93 -0.42 -0.64 16 19 C 0.19 0.11 6.99 -154.98 -1.08 -0.98 16 20 N -0.29 -1.35 12.21 32.80 0.40 -0.95 16 21 N -0.30 -1.36 12.21 29.69 0.36 -1.00 16 22 C 0.15 -0.02 13.19 -89.94 -1.19 -1.20 16 23 N -0.58 0.99 5.96 -11.36 -0.07 0.92 16 24 C -0.11 0.34 4.97 -26.73 -0.13 0.21 16 25 C -0.13 0.30 5.49 -26.73 -0.15 0.15 16 26 N -0.53 1.26 5.99 -5.70 -0.03 1.23 16 27 H 0.09 -0.52 7.13 -51.93 -0.37 -0.89 16 28 H 0.09 -0.63 8.14 -51.93 -0.42 -1.06 16 29 H 0.10 -0.67 5.17 -51.93 -0.27 -0.93 16 30 H 0.11 -0.04 7.96 -51.93 -0.41 -0.46 16 31 H 0.37 -0.27 8.47 45.56 0.39 0.11 16 32 H -0.25 -0.60 7.11 56.52 0.40 -0.19 16 33 H -0.26 -0.35 7.11 56.52 0.40 0.05 16 34 H 0.07 0.22 8.14 -51.93 -0.42 -0.20 16 35 H 0.07 0.30 6.50 -51.93 -0.34 -0.04 16 36 H 0.08 0.18 5.46 -51.93 -0.28 -0.10 16 37 H 0.39 -1.91 7.73 -40.82 -0.32 -2.22 16 38 H 0.08 -0.30 8.14 -51.93 -0.42 -0.72 16 39 H 0.07 -0.36 8.14 -51.93 -0.42 -0.78 16 40 H 0.07 -0.20 8.14 -51.93 -0.42 -0.62 16 41 H 0.08 -0.16 8.14 -51.93 -0.42 -0.59 16 42 H 0.22 -0.98 8.06 -52.49 -0.42 -1.40 16 43 H 0.43 -2.14 8.28 -40.82 -0.34 -2.48 16 44 H 0.07 -0.24 7.52 -51.93 -0.39 -0.63 16 45 H 0.07 -0.19 8.14 -51.93 -0.42 -0.61 16 46 H 0.07 -0.20 8.14 -51.93 -0.42 -0.62 16 47 H 0.08 -0.02 8.14 -51.93 -0.42 -0.44 16 48 H 0.42 -2.39 8.19 -40.82 -0.33 -2.72 16 LS Contribution 376.81 15.07 5.68 5.68 Total: 0.00 -12.81 376.81 -10.62 -23.43 By element: Atomic # 1 Polarization: -11.71 SS G_CDS: -6.91 Total: -18.62 kcal Atomic # 6 Polarization: 1.93 SS G_CDS: -4.94 Total: -3.01 kcal Atomic # 7 Polarization: 1.10 SS G_CDS: 0.38 Total: 1.48 kcal Atomic # 8 Polarization: -3.35 SS G_CDS: -0.28 Total: -3.63 kcal Atomic # 14 Polarization: -0.78 SS G_CDS: -4.55 Total: -5.33 kcal Total LS contribution 5.68 Total: 5.68 kcal Total: -12.81 -10.62 -23.43 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16624780_12297754.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 63.779 kcal (2) G-P(sol) polarization free energy of solvation -12.813 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 50.967 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.620 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.432 kcal (6) G-S(sol) free energy of system = (1) + (5) 40.347 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.14 seconds