Wall clock time and date at job start Sun Mar 7 2021 05:32:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 C 1.35448 * 125.56265 * 2 1 4 4 C 1.50695 * 126.07035 * 0.02562 * 3 2 1 5 5 O 1.42900 * 109.47325 * 210.02489 * 4 3 2 6 6 Si 1.86300 * 109.47389 * 330.03045 * 4 3 2 7 7 C 1.39843 * 107.86189 * 180.28440 * 3 2 1 8 8 C 1.50701 * 126.45747 * 179.73812 * 7 3 2 9 9 C 1.37873 * 107.08550 * 359.56996 * 7 3 2 10 10 C 1.46678 * 126.23180 * 180.12057 * 9 7 3 11 11 O 1.21690 * 120.00162 * 0.33533 * 10 9 7 12 12 N 1.34773 * 119.99632 * 180.33317 * 10 9 7 13 13 C 1.46502 * 119.99932 * 180.02562 * 12 10 9 14 14 H 1.08998 * 109.47381 * 34.99639 * 13 12 10 15 15 C 1.53003 * 109.47432 * 155.00075 * 13 12 10 16 16 C 1.52996 * 109.47207 * 179.97438 * 15 13 12 17 17 C 1.52997 * 109.47264 * 300.00286 * 16 15 13 18 18 H 1.09003 * 109.46904 * 299.99535 * 17 16 15 19 19 C 1.50699 * 109.47297 * 180.02562 * 17 16 15 20 20 N 1.30521 * 126.34640 * 95.01526 * 19 17 16 21 21 N 1.28605 * 109.67000 * 179.97438 * 20 19 17 22 22 C 1.30518 * 109.67395 * 0.02562 * 21 20 19 23 23 N 1.35498 * 126.34392 * 274.71214 * 19 17 16 24 24 C 1.52999 * 109.47581 * 59.99791 * 17 16 15 25 25 C 1.53004 * 109.46898 * 300.00125 * 24 17 16 26 26 N 1.35529 * 125.56312 * 180.02562 * 2 1 3 27 27 H 1.08998 * 109.47308 * 90.00109 * 1 2 3 28 28 H 1.08999 * 109.47263 * 210.00654 * 1 2 3 29 29 H 1.09005 * 109.47396 * 330.00731 * 1 2 3 30 30 H 1.09004 * 109.46897 * 90.03001 * 4 3 2 31 31 H 0.96702 * 113.99767 * 60.00779 * 5 4 3 32 32 H 1.48498 * 109.99998 * 179.97438 * 6 4 3 33 33 H 1.48498 * 109.99919 * 301.31690 * 6 4 3 34 34 H 1.09001 * 109.47227 * 89.99258 * 8 7 3 35 35 H 1.08995 * 109.47268 * 209.99460 * 8 7 3 36 36 H 1.09004 * 109.47060 * 329.99409 * 8 7 3 37 37 H 0.97000 * 120.00342 * 0.02562 * 12 10 9 38 38 H 1.09002 * 109.46746 * 300.00107 * 15 13 12 39 39 H 1.08997 * 109.46716 * 59.99659 * 15 13 12 40 40 H 1.09003 * 109.46781 * 59.99897 * 16 15 13 41 41 H 1.08992 * 109.46950 * 179.97438 * 16 15 13 42 42 H 1.07997 * 126.34522 * 180.02562 * 22 21 20 43 43 H 0.96993 * 126.97942 * 0.03432 * 23 19 17 44 44 H 1.09001 * 109.46732 * 59.99722 * 24 17 16 45 45 H 1.08997 * 109.47419 * 180.02562 * 24 17 16 46 46 H 1.08998 * 109.47491 * 300.00025 * 25 24 17 47 47 H 1.08996 * 109.47158 * 179.97438 * 25 24 17 48 48 H 0.97001 * 125.68215 * 359.96254 * 26 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2947 1.1018 0.0000 4 6 1.8199 2.5320 0.0005 5 8 2.7766 3.3519 -0.6737 6 14 0.1798 2.6422 -0.8762 7 6 3.6269 0.6767 -0.0066 8 6 4.8486 1.5591 -0.0145 9 6 3.6122 -0.7020 -0.0006 10 6 4.7860 -1.5816 -0.0018 11 8 5.9049 -1.1031 -0.0024 12 7 4.6252 -2.9197 -0.0022 13 6 5.7976 -3.7982 -0.0028 14 1 6.5934 -3.3427 0.5865 15 6 5.4219 -5.1505 0.6065 16 6 6.6461 -6.0682 0.6052 17 6 7.1286 -6.2729 -0.8321 18 1 6.3326 -6.7283 -1.4212 19 6 8.3340 -7.1773 -0.8334 20 7 8.3314 -8.4695 -1.0171 21 7 9.5350 -8.9181 -0.9544 22 6 10.3600 -7.9326 -0.7274 23 7 9.6221 -6.7988 -0.6498 24 6 7.5043 -4.9207 -1.4415 25 6 6.2801 -4.0030 -1.4403 26 7 2.2952 -1.1025 -0.0005 27 1 -0.3634 0.0000 -1.0276 28 1 -0.3634 -0.8899 0.5139 29 1 -0.3634 0.8901 0.5137 30 1 1.7063 2.8767 1.0284 31 1 2.9284 3.1021 -1.5955 32 1 -0.2996 4.0477 -0.8820 33 1 0.3141 2.1453 -2.2691 34 1 5.1486 1.7735 1.0112 35 1 5.6614 1.0497 -0.5319 36 1 4.6192 2.4925 -0.5286 37 1 3.7334 -3.3011 -0.0021 38 1 5.0777 -5.0046 1.6304 39 1 4.6262 -5.6060 0.0171 40 1 7.4421 -5.6128 1.1944 41 1 6.3785 -7.0313 1.0397 42 1 11.4327 -8.0064 -0.6256 43 1 9.9491 -5.8994 -0.4923 44 1 8.3003 -4.4653 -0.8523 45 1 7.8477 -5.0664 -2.4656 46 1 5.4840 -4.4583 -2.0293 47 1 6.5478 -3.0395 -1.8740 48 1 1.9833 -2.0210 -0.0004 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16624780_12297754.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:32:29 Heat of formation + Delta-G solvation = 36.065762 kcal Electronic energy + Delta-G solvation = -30381.847572 eV Core-core repulsion = 26246.450288 eV Total energy + Delta-G solvation = -4135.397284 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 346.179 amu Computer time = 1.14 seconds Orbital eigenvalues (eV) -44.16621 -42.66111 -40.82672 -39.17476 -37.91283 -35.85061 -34.62157 -33.64057 -33.27301 -32.24581 -31.91252 -29.78775 -29.29284 -27.31565 -26.33087 -24.64724 -24.07646 -23.34973 -22.49483 -21.94356 -21.19309 -20.68255 -20.30503 -19.34575 -19.22824 -17.76979 -17.22001 -16.90383 -16.73684 -16.57513 -16.38765 -16.18395 -15.88542 -15.56474 -15.30403 -15.00557 -14.90553 -14.69755 -14.36272 -14.09497 -14.01068 -13.88862 -13.71705 -13.67111 -13.32222 -13.26423 -13.10308 -12.86425 -12.56237 -12.43590 -12.32330 -12.29719 -12.23374 -11.85824 -11.82000 -11.70802 -11.54668 -11.34215 -11.10730 -10.51417 -10.28570 -10.20252 -9.53178 -8.95252 -4.76429 0.37608 0.83779 1.23887 1.68175 1.70488 1.82752 1.86829 1.95918 2.07742 2.15554 2.28152 3.14275 3.42398 3.49927 3.62745 3.81409 3.84020 3.86011 3.96552 3.99733 4.09432 4.17864 4.22973 4.29236 4.29944 4.37173 4.41201 4.48656 4.53300 4.61270 4.67586 4.68635 4.76119 4.80532 4.84234 4.89778 4.97554 4.98353 5.01714 5.04010 5.13056 5.13731 5.21802 5.22878 5.28223 5.34814 5.43710 5.71933 5.84900 6.21165 6.40527 6.52537 6.61086 7.11723 7.68419 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.111 4.111 2 C 0.085 3.915 3 C -0.233 4.233 4 C -0.051 4.051 5 O -0.549 6.549 6 Si 0.759 3.241 7 C -0.072 4.072 8 C -0.092 4.092 9 C -0.081 4.081 10 C 0.589 3.411 11 O -0.565 6.565 12 N -0.714 5.714 13 C 0.148 3.852 14 H 0.073 0.927 15 C -0.115 4.115 16 C -0.102 4.102 17 C 0.004 3.996 18 H 0.109 0.891 19 C 0.191 3.809 20 N -0.342 5.342 21 N -0.354 5.354 22 C 0.169 3.831 23 N -0.570 5.570 24 C -0.107 4.107 25 C -0.121 4.121 26 N -0.517 5.517 27 H 0.101 0.899 28 H 0.118 0.882 29 H 0.117 0.883 30 H 0.113 0.887 31 H 0.381 0.619 32 H -0.306 1.306 33 H -0.292 1.292 34 H 0.052 0.948 35 H 0.057 0.943 36 H 0.082 0.918 37 H 0.410 0.590 38 H 0.083 0.917 39 H 0.091 0.909 40 H 0.069 0.931 41 H 0.074 0.926 42 H 0.261 0.739 43 H 0.445 0.555 44 H 0.073 0.927 45 H 0.072 0.928 46 H 0.080 0.920 47 H 0.054 0.946 48 H 0.434 0.566 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.328 -0.604 1.963 6.652 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.166 4.166 2 C -0.035 4.035 3 C -0.239 4.239 4 C -0.160 4.160 5 O -0.356 6.356 6 Si 0.664 3.336 7 C -0.081 4.081 8 C -0.149 4.149 9 C -0.193 4.193 10 C 0.378 3.622 11 O -0.445 6.445 12 N -0.365 5.365 13 C 0.044 3.956 14 H 0.091 0.909 15 C -0.153 4.153 16 C -0.141 4.141 17 C -0.017 4.017 18 H 0.127 0.873 19 C -0.080 4.080 20 N -0.181 5.181 21 N -0.192 5.192 22 C -0.122 4.122 23 N -0.184 5.184 24 C -0.146 4.146 25 C -0.160 4.160 26 N -0.115 5.115 27 H 0.119 0.881 28 H 0.136 0.864 29 H 0.134 0.866 30 H 0.131 0.869 31 H 0.230 0.770 32 H -0.235 1.235 33 H -0.218 1.218 34 H 0.071 0.929 35 H 0.076 0.924 36 H 0.101 0.899 37 H 0.246 0.754 38 H 0.102 0.898 39 H 0.110 0.890 40 H 0.087 0.913 41 H 0.092 0.908 42 H 0.277 0.723 43 H 0.288 0.712 44 H 0.092 0.908 45 H 0.091 0.909 46 H 0.099 0.901 47 H 0.073 0.927 48 H 0.275 0.725 Dipole moment (debyes) X Y Z Total from point charges -6.471 -1.458 1.601 6.824 hybrid contribution 1.855 1.377 -0.503 2.364 sum -4.616 -0.081 1.099 4.745 Atomic orbital electron populations 1.20705 0.84557 1.05683 1.05633 1.20677 0.95039 0.84888 1.02864 1.19638 0.92597 0.95688 1.15991 1.24622 1.01954 0.86681 1.02724 1.86515 1.61911 1.57744 1.29462 0.94457 0.79183 0.79911 0.80037 1.19928 0.95319 0.91553 1.01308 1.20408 0.94123 0.98830 1.01577 1.19961 0.83900 0.93680 1.21799 1.17161 0.87127 0.82176 0.75694 1.90813 1.25732 1.75835 1.52072 1.45785 1.10718 1.04678 1.75308 1.21026 0.87803 0.90205 0.96607 0.90853 1.21734 0.98465 0.92534 1.02549 1.21471 0.98140 1.00417 0.94055 1.19815 0.90569 0.92122 0.99211 0.87265 1.25203 0.87595 0.93314 1.01855 1.74187 1.15010 1.08121 1.20832 1.74194 0.96773 1.28110 1.20169 1.27293 1.02107 0.81251 1.01503 1.44106 1.06914 1.12841 1.54541 1.21531 0.98480 0.92953 1.01644 1.21817 0.98139 0.99350 0.96685 1.41689 1.04000 1.09276 1.56564 0.88097 0.86408 0.86550 0.86926 0.77036 1.23456 1.21836 0.92905 0.92408 0.89899 0.75420 0.89829 0.89048 0.91265 0.90766 0.72333 0.71184 0.90840 0.90913 0.90122 0.92737 0.72493 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 1.55 8.21 71.24 0.59 2.14 16 2 C 0.09 -0.46 6.84 41.34 0.28 -0.18 16 3 C -0.23 -0.25 5.38 -20.12 -0.11 -0.35 16 4 C -0.05 -0.03 3.03 71.23 0.22 0.18 16 5 O -0.55 -2.58 10.19 -148.98 -1.52 -4.10 16 6 Si 0.76 -2.18 26.76 68.60 1.84 -0.34 16 7 C -0.07 -0.43 6.15 -19.56 -0.12 -0.55 16 8 C -0.09 -0.80 9.50 71.24 0.68 -0.12 16 9 C -0.08 -0.19 7.06 40.35 0.28 0.10 16 10 C 0.59 2.25 7.75 86.45 0.67 2.92 16 11 O -0.57 -6.78 14.47 -4.32 -0.06 -6.84 16 12 N -0.71 3.28 5.07 -446.49 -2.26 1.01 16 13 C 0.15 -0.72 2.46 44.99 0.11 -0.61 16 14 H 0.07 -0.02 7.58 -2.39 -0.02 -0.04 16 15 C -0.11 1.03 5.39 30.59 0.16 1.20 16 16 C -0.10 0.65 5.19 30.59 0.16 0.81 16 17 C 0.00 -0.02 2.66 -11.54 -0.03 -0.05 16 18 H 0.11 -0.45 8.14 -2.39 -0.02 -0.47 16 19 C 0.19 0.27 6.99 137.98 0.96 1.24 16 20 N -0.34 -3.58 12.21 -50.15 -0.61 -4.19 16 21 N -0.35 -3.61 12.21 -59.99 -0.73 -4.34 16 22 C 0.17 -0.09 13.19 180.11 2.37 2.29 16 23 N -0.57 2.15 5.96 -189.86 -1.13 1.02 16 24 C -0.11 0.65 4.97 30.60 0.15 0.80 16 25 C -0.12 0.56 5.49 30.60 0.17 0.72 16 26 N -0.52 3.20 5.99 -171.94 -1.03 2.17 16 27 H 0.10 -1.54 7.13 -2.39 -0.02 -1.56 16 28 H 0.12 -2.23 8.14 -2.39 -0.02 -2.25 16 29 H 0.12 -1.90 5.17 -2.38 -0.01 -1.91 16 30 H 0.11 -0.03 7.96 -2.38 -0.02 -0.05 16 31 H 0.38 0.12 8.47 -74.06 -0.63 -0.50 16 32 H -0.31 -1.70 7.11 99.48 0.71 -1.00 16 33 H -0.29 -0.63 7.11 99.48 0.71 0.08 16 34 H 0.05 0.53 8.14 -2.39 -0.02 0.51 16 35 H 0.06 0.67 6.50 -2.39 -0.02 0.65 16 36 H 0.08 0.60 5.46 -2.38 -0.01 0.59 16 37 H 0.41 -4.63 7.73 -92.71 -0.72 -5.35 16 38 H 0.08 -0.78 8.14 -2.39 -0.02 -0.80 16 39 H 0.09 -1.06 8.14 -2.39 -0.02 -1.08 16 40 H 0.07 -0.44 8.14 -2.39 -0.02 -0.46 16 41 H 0.07 -0.32 8.14 -2.39 -0.02 -0.34 16 42 H 0.26 -2.69 8.06 -2.91 -0.02 -2.71 16 43 H 0.44 -4.82 8.28 -92.71 -0.77 -5.59 16 44 H 0.07 -0.55 7.52 -2.39 -0.02 -0.56 16 45 H 0.07 -0.37 8.14 -2.39 -0.02 -0.39 16 46 H 0.08 -0.52 8.14 -2.39 -0.02 -0.54 16 47 H 0.05 0.04 8.14 -2.39 -0.02 0.02 16 48 H 0.43 -6.10 8.19 -92.71 -0.76 -6.85 16 Total: 0.00 -34.91 376.81 -0.75 -35.66 By element: Atomic # 1 Polarization: -28.80 SS G_CDS: -1.79 Total: -30.59 kcal Atomic # 6 Polarization: 3.97 SS G_CDS: 6.55 Total: 10.52 kcal Atomic # 7 Polarization: 1.45 SS G_CDS: -5.77 Total: -4.32 kcal Atomic # 8 Polarization: -9.36 SS G_CDS: -1.58 Total: -10.94 kcal Atomic # 14 Polarization: -2.18 SS G_CDS: 1.84 Total: -0.34 kcal Total: -34.91 -0.75 -35.66 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16624780_12297754.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 71.730 kcal (2) G-P(sol) polarization free energy of solvation -34.910 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 36.820 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.754 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.664 kcal (6) G-S(sol) free energy of system = (1) + (5) 36.066 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.14 seconds