Wall clock time and date at job start Sun Mar 7 2021 05:32:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42908 * 1 3 3 Si 1.86299 * 109.47002 * 2 1 4 4 C 1.50700 * 109.46974 * 120.00038 * 2 1 3 5 5 C 1.38411 * 119.89073 * 244.99633 * 4 2 1 6 6 C 1.38246 * 120.34019 * 180.02562 * 5 4 2 7 7 C 1.38282 * 120.11340 * 0.02562 * 6 5 4 8 8 F 1.35106 * 120.10617 * 179.97438 * 7 6 5 9 9 C 1.39851 * 119.78507 * 359.97438 * 7 6 5 10 10 C 1.47698 * 120.16967 * 179.97438 * 9 7 6 11 11 O 1.21568 * 119.99886 * 0.02562 * 10 9 7 12 12 N 1.34778 * 120.00059 * 179.97438 * 10 9 7 13 13 C 1.46499 * 119.99771 * 179.97438 * 12 10 9 14 14 H 1.08992 * 109.47397 * 325.00275 * 13 12 10 15 15 C 1.53002 * 109.46799 * 85.00174 * 13 12 10 16 16 C 1.52997 * 109.46817 * 179.97438 * 15 13 12 17 17 C 1.53005 * 109.47452 * 300.00239 * 16 15 13 18 18 H 1.09002 * 109.46935 * 300.00125 * 17 16 15 19 19 C 1.50703 * 109.47304 * 180.02562 * 17 16 15 20 20 N 1.30518 * 126.34645 * 95.02537 * 19 17 16 21 21 N 1.28590 * 109.67514 * 179.97438 * 20 19 17 22 22 C 1.30521 * 109.66970 * 359.97438 * 21 20 19 23 23 N 1.35490 * 126.34484 * 274.71315 * 19 17 16 24 24 C 1.52999 * 109.47159 * 59.99536 * 17 16 15 25 25 C 1.52997 * 109.47317 * 300.00546 * 24 17 16 26 26 C 1.37901 * 119.89036 * 65.25756 * 4 2 1 27 27 H 0.96701 * 113.99853 * 59.99875 * 1 2 3 28 28 H 1.09000 * 109.46430 * 239.99974 * 2 1 3 29 29 H 1.48500 * 109.99880 * 60.00178 * 3 2 1 30 30 H 1.48498 * 109.99684 * 181.32003 * 3 2 1 31 31 H 1.07995 * 119.82839 * 359.97438 * 5 4 2 32 32 H 1.07998 * 119.94015 * 180.02562 * 6 5 4 33 33 H 0.97006 * 119.99662 * 0.02562 * 12 10 9 34 34 H 1.08993 * 109.47662 * 299.99952 * 15 13 12 35 35 H 1.09002 * 109.47075 * 60.00457 * 15 13 12 36 36 H 1.09002 * 109.47153 * 60.00231 * 16 15 13 37 37 H 1.09001 * 109.47289 * 180.02562 * 16 15 13 38 38 H 1.08008 * 126.34563 * 180.02562 * 22 21 20 39 39 H 0.97004 * 126.97824 * 0.03332 * 23 19 17 40 40 H 1.08996 * 109.46929 * 179.97438 * 24 17 16 41 41 H 1.09002 * 109.46716 * 60.00455 * 24 17 16 42 42 H 1.09002 * 109.47153 * 299.99641 * 25 24 17 43 43 H 1.09001 * 109.46832 * 179.97438 * 25 24 17 44 44 H 1.08008 * 120.06206 * 0.02562 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 2.6395 -0.0092 2.1910 6 6 3.1050 -0.6518 3.3231 7 6 2.8658 -2.0019 3.5024 8 9 3.3213 -2.6298 4.6086 9 6 2.1509 -2.7152 2.5350 10 6 1.8910 -4.1576 2.7177 11 8 2.2985 -4.7277 3.7111 12 7 1.2012 -4.8417 1.7835 13 6 0.9439 -6.2725 1.9644 14 1 1.7956 -6.7346 2.4635 15 6 -0.3114 -6.4609 2.8185 16 6 -0.5805 -7.9552 3.0069 17 6 -0.7896 -8.6121 1.6410 18 1 -1.6413 -8.1496 1.1421 19 6 -1.0552 -10.0838 1.8267 20 7 -2.2264 -10.6559 1.8950 21 7 -2.0803 -11.9234 2.0557 22 6 -0.8094 -12.2175 2.0966 23 7 -0.1225 -11.0591 1.9477 24 6 0.4657 -8.4235 0.7869 25 6 0.7347 -6.9292 0.5984 26 6 1.6886 -2.0581 1.3931 27 1 -0.3933 0.4417 -0.7651 28 1 1.7923 -0.5139 -0.8900 29 1 1.5615 2.4678 1.2085 30 1 3.5346 1.7702 -0.0321 31 1 2.8300 1.0450 2.0550 32 1 3.6565 -0.0983 4.0687 33 1 0.8757 -4.3867 0.9910 34 1 -0.1627 -5.9927 3.7914 35 1 -1.1632 -5.9989 2.3194 36 1 0.2712 -8.4176 3.5059 37 1 -1.4751 -8.0895 3.6151 38 1 -0.3839 -13.2023 2.2220 39 1 0.8412 -10.9499 1.9327 40 1 0.3168 -8.8919 -0.1860 41 1 1.3174 -8.8860 1.2858 42 1 -0.1170 -6.4668 0.0995 43 1 1.6293 -6.7950 -0.0097 44 1 1.1398 -2.6038 0.6397 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16624780_12335834.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:32:38 Heat of formation + Delta-G solvation = -12.331158 kcal Electronic energy + Delta-G solvation = -29909.896085 eV Core-core repulsion = 25551.221187 eV Total energy + Delta-G solvation = -4358.674899 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 347.143 amu Computer time = 1.10 seconds Orbital eigenvalues (eV) -50.13805 -44.15909 -41.57291 -40.31107 -39.20516 -37.42973 -35.87682 -34.63457 -33.32611 -32.55750 -31.98895 -31.89189 -29.56523 -26.62379 -25.86101 -24.64206 -23.98440 -23.56054 -22.82780 -22.04875 -21.63228 -20.89235 -19.32248 -19.25376 -18.55242 -18.23181 -17.99761 -17.13834 -17.02721 -16.87721 -16.49392 -16.39780 -16.17560 -15.97505 -15.67894 -15.42052 -15.17747 -15.00291 -14.73377 -14.53453 -14.16886 -14.09551 -13.93874 -13.74854 -13.42088 -13.30505 -12.86735 -12.70166 -12.48465 -12.44944 -12.30897 -12.22620 -11.99063 -11.84526 -11.69059 -11.50293 -11.35346 -11.15994 -10.54451 -10.34113 -10.26864 -10.16736 -9.90600 -4.90811 -0.64935 -0.16817 0.84676 1.31377 1.49450 1.68846 1.83695 1.85239 1.91146 1.99147 2.35013 2.89645 3.13973 3.24627 3.29302 3.44033 3.56458 3.60137 3.68497 3.85058 3.90676 3.97246 4.05975 4.08158 4.18481 4.24150 4.27213 4.31301 4.37961 4.41991 4.49352 4.50418 4.61248 4.65837 4.68823 4.75998 4.77837 4.96902 4.99368 5.01493 5.01841 5.06232 5.14016 5.23302 5.24756 5.39459 5.44244 6.23664 6.33171 6.95108 7.01120 7.69796 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.561 6.561 2 C -0.070 4.070 3 Si 0.762 3.238 4 C -0.100 4.100 5 C -0.075 4.075 6 C -0.156 4.156 7 C 0.134 3.866 8 F -0.133 7.133 9 C -0.183 4.183 10 C 0.557 3.443 11 O -0.568 6.568 12 N -0.702 5.702 13 C 0.145 3.855 14 H 0.074 0.926 15 C -0.123 4.123 16 C -0.100 4.100 17 C 0.003 3.997 18 H 0.110 0.890 19 C 0.192 3.808 20 N -0.344 5.344 21 N -0.355 5.355 22 C 0.169 3.831 23 N -0.568 5.568 24 C -0.108 4.108 25 C -0.115 4.115 26 C -0.018 4.018 27 H 0.407 0.593 28 H 0.111 0.889 29 H -0.297 1.297 30 H -0.286 1.286 31 H 0.139 0.861 32 H 0.161 0.839 33 H 0.416 0.584 34 H 0.047 0.953 35 H 0.083 0.917 36 H 0.065 0.935 37 H 0.061 0.939 38 H 0.262 0.738 39 H 0.446 0.554 40 H 0.088 0.912 41 H 0.076 0.924 42 H 0.093 0.907 43 H 0.091 0.909 44 H 0.173 0.827 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.658 4.598 -10.679 12.188 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.372 6.372 2 C -0.181 4.181 3 Si 0.668 3.332 4 C -0.100 4.100 5 C -0.093 4.093 6 C -0.175 4.175 7 C 0.113 3.887 8 F -0.111 7.111 9 C -0.187 4.187 10 C 0.345 3.655 11 O -0.447 6.447 12 N -0.354 5.354 13 C 0.041 3.959 14 H 0.092 0.908 15 C -0.162 4.162 16 C -0.140 4.140 17 C -0.018 4.018 18 H 0.128 0.872 19 C -0.079 4.079 20 N -0.184 5.184 21 N -0.194 5.194 22 C -0.121 4.121 23 N -0.183 5.183 24 C -0.147 4.147 25 C -0.153 4.153 26 C -0.037 4.037 27 H 0.259 0.741 28 H 0.129 0.871 29 H -0.225 1.225 30 H -0.214 1.214 31 H 0.156 0.844 32 H 0.178 0.822 33 H 0.255 0.745 34 H 0.066 0.934 35 H 0.101 0.899 36 H 0.083 0.917 37 H 0.079 0.921 38 H 0.277 0.723 39 H 0.289 0.711 40 H 0.106 0.894 41 H 0.095 0.905 42 H 0.112 0.888 43 H 0.110 0.890 44 H 0.190 0.810 Dipole moment (debyes) X Y Z Total from point charges 2.834 4.198 -8.983 10.313 hybrid contribution 1.866 -0.320 0.907 2.099 sum 4.701 3.878 -8.077 10.118 Atomic orbital electron populations 1.86440 1.16586 1.82382 1.51750 1.24662 0.86355 1.10377 0.96666 0.94163 0.77711 0.76047 0.85262 1.19739 0.99273 0.94198 0.96839 1.21195 0.95759 0.99843 0.92512 1.21265 1.03576 0.92115 1.00504 1.18086 0.95828 0.91279 0.83497 1.91565 1.86329 1.82731 1.50515 1.20169 1.06068 0.94455 0.98028 1.18156 0.78064 0.86220 0.83069 1.90843 1.52868 1.70665 1.30358 1.45803 1.55438 1.10564 1.23632 1.21103 0.97535 0.79518 0.97749 0.90807 1.21845 0.98450 0.95792 1.00093 1.21441 1.02042 0.94864 0.95627 1.19826 1.01434 0.82861 0.97639 0.87159 1.25185 0.85217 0.95198 1.02301 1.74184 1.22720 1.01067 1.20440 1.74190 1.17695 1.07217 1.20270 1.27302 0.88832 0.94421 1.01574 1.44077 1.12362 1.06826 1.54995 1.21571 0.95657 0.96930 1.00509 1.21741 1.04516 0.94509 0.94522 1.21304 0.94054 0.93709 0.94600 0.74085 0.87086 1.22461 1.21354 0.84352 0.82155 0.74505 0.93448 0.89861 0.91662 0.92065 0.72257 0.71059 0.89378 0.90521 0.88839 0.89021 0.80958 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 4.31 12.81 -148.98 -1.91 2.40 16 2 C -0.07 0.56 2.79 71.24 0.20 0.76 16 3 Si 0.76 -5.53 29.84 68.60 2.05 -3.48 16 4 C -0.10 0.18 5.38 -19.90 -0.11 0.07 16 5 C -0.08 -0.05 8.66 22.31 0.19 0.14 16 6 C -0.16 -0.47 10.01 22.28 0.22 -0.24 16 7 C 0.13 1.03 7.29 22.67 0.17 1.20 16 8 F -0.13 -1.83 15.55 44.97 0.70 -1.13 16 9 C -0.18 -0.78 5.88 -20.05 -0.12 -0.90 16 10 C 0.56 3.45 7.73 86.74 0.67 4.12 16 11 O -0.57 -8.78 15.00 -3.93 -0.06 -8.84 16 12 N -0.70 1.95 5.03 -445.56 -2.24 -0.29 16 13 C 0.15 -0.52 2.45 44.99 0.11 -0.41 16 14 H 0.07 0.06 7.58 -2.39 -0.02 0.04 16 15 C -0.12 0.17 5.49 30.59 0.17 0.34 16 16 C -0.10 0.16 5.19 30.60 0.16 0.32 16 17 C 0.00 -0.01 2.66 -11.54 -0.03 -0.04 16 18 H 0.11 -0.39 8.14 -2.39 -0.02 -0.41 16 19 C 0.19 0.36 6.99 137.98 0.96 1.33 16 20 N -0.34 -3.91 12.21 -50.16 -0.61 -4.53 16 21 N -0.36 -3.83 12.21 -59.99 -0.73 -4.56 16 22 C 0.17 -0.07 13.19 180.11 2.37 2.31 16 23 N -0.57 2.25 5.96 -189.86 -1.13 1.12 16 24 C -0.11 1.02 4.97 30.59 0.15 1.17 16 25 C -0.12 1.17 5.39 30.59 0.16 1.34 16 26 C -0.02 0.04 9.17 22.52 0.21 0.25 16 27 H 0.41 -7.16 8.74 -74.06 -0.65 -7.81 16 28 H 0.11 -1.51 7.96 -2.39 -0.02 -1.53 16 29 H -0.30 -0.23 7.04 99.48 0.70 0.47 16 30 H -0.29 0.46 7.11 99.48 0.71 1.16 16 31 H 0.14 -0.16 4.84 -2.91 -0.01 -0.17 16 32 H 0.16 -0.10 8.06 -2.91 -0.02 -0.12 16 33 H 0.42 -3.98 6.63 -92.70 -0.61 -4.60 16 34 H 0.05 0.23 8.14 -2.39 -0.02 0.21 16 35 H 0.08 -0.30 8.14 -2.39 -0.02 -0.32 16 36 H 0.06 -0.09 8.14 -2.39 -0.02 -0.11 16 37 H 0.06 0.12 8.14 -2.39 -0.02 0.10 16 38 H 0.26 -2.70 8.06 -2.91 -0.02 -2.73 16 39 H 0.45 -5.21 8.28 -92.71 -0.77 -5.98 16 40 H 0.09 -0.91 8.14 -2.39 -0.02 -0.93 16 41 H 0.08 -0.86 7.52 -2.39 -0.02 -0.87 16 42 H 0.09 -1.18 8.14 -2.39 -0.02 -1.20 16 43 H 0.09 -1.08 8.14 -2.39 -0.02 -1.10 16 44 H 0.17 -1.68 6.40 -2.91 -0.02 -1.70 16 Total: 0.00 -35.79 365.22 0.65 -35.15 By element: Atomic # 1 Polarization: -26.67 SS G_CDS: -0.91 Total: -27.59 kcal Atomic # 6 Polarization: 6.25 SS G_CDS: 5.50 Total: 11.75 kcal Atomic # 7 Polarization: -3.54 SS G_CDS: -4.72 Total: -8.25 kcal Atomic # 8 Polarization: -4.47 SS G_CDS: -1.97 Total: -6.44 kcal Atomic # 9 Polarization: -1.83 SS G_CDS: 0.70 Total: -1.13 kcal Atomic # 14 Polarization: -5.53 SS G_CDS: 2.05 Total: -3.48 kcal Total: -35.79 0.65 -35.15 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16624780_12335834.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 22.814 kcal (2) G-P(sol) polarization free energy of solvation -35.791 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -12.977 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.645 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.145 kcal (6) G-S(sol) free energy of system = (1) + (5) -12.331 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.10 seconds