Wall clock time and date at job start Sun Mar 7 2021 05:32:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86293 * 109.47041 * 2 1 4 4 C 1.50707 * 109.46442 * 119.99698 * 2 1 3 5 5 C 1.38236 * 119.99632 * 244.72513 * 4 2 1 6 6 C 1.38228 * 119.99652 * 179.81378 * 5 4 2 7 7 C 1.38234 * 120.00331 * 0.41994 * 6 5 4 8 8 C 1.50694 * 120.00641 * 179.79047 * 7 6 5 9 9 C 1.50700 * 109.47373 * 270.02448 * 8 7 6 10 10 O 1.21279 * 119.99936 * 359.97438 * 9 8 7 11 11 N 1.34782 * 120.00379 * 179.97438 * 9 8 7 12 12 C 1.46495 * 120.00198 * 179.97438 * 11 9 8 13 13 H 1.09001 * 109.46986 * 34.99594 * 12 11 9 14 14 C 1.52995 * 109.47095 * 154.99781 * 12 11 9 15 15 C 1.53008 * 109.46896 * 180.02562 * 14 12 11 16 16 C 1.53001 * 109.46778 * 299.99824 * 15 14 12 17 17 H 1.08997 * 109.47805 * 299.99813 * 16 15 14 18 18 C 1.50707 * 109.46795 * 180.02562 * 16 15 14 19 19 N 1.30515 * 126.34483 * 94.69140 * 18 16 15 20 20 N 1.28604 * 109.66949 * 179.82489 * 19 18 16 21 21 C 1.30516 * 109.67315 * 0.44855 * 20 19 18 22 22 N 1.35490 * 126.34623 * 275.00386 * 18 16 15 23 23 C 1.53000 * 109.46978 * 60.00550 * 16 15 14 24 24 C 1.53001 * 109.47177 * 299.99282 * 23 16 15 25 25 C 1.38235 * 119.99642 * 359.81145 * 7 6 5 26 26 C 1.38234 * 120.00421 * 359.97438 * 25 7 6 27 27 H 0.96700 * 114.00311 * 300.00531 * 1 2 3 28 28 H 1.08999 * 109.47293 * 239.99660 * 2 1 3 29 29 H 1.48506 * 109.99973 * 299.99283 * 3 2 1 30 30 H 1.48493 * 110.00375 * 61.31384 * 3 2 1 31 31 H 1.08000 * 120.00191 * 0.02562 * 5 4 2 32 32 H 1.07999 * 120.00169 * 180.20849 * 6 5 4 33 33 H 1.09005 * 109.47122 * 30.02266 * 8 7 6 34 34 H 1.09000 * 109.48012 * 150.01864 * 8 7 6 35 35 H 0.97001 * 119.99471 * 0.02562 * 11 9 8 36 36 H 1.08998 * 109.47090 * 300.00061 * 14 12 11 37 37 H 1.08997 * 109.47190 * 60.00522 * 14 12 11 38 38 H 1.08989 * 109.47083 * 60.00248 * 15 14 12 39 39 H 1.08994 * 109.46773 * 180.02562 * 15 14 12 40 40 H 1.07996 * 126.34935 * 179.73160 * 21 20 19 41 41 H 0.97005 * 126.98062 * 359.97438 * 22 18 16 42 42 H 1.08997 * 109.47005 * 59.99886 * 23 16 15 43 43 H 1.08998 * 109.46805 * 179.97438 * 23 16 15 44 44 H 1.09001 * 109.47047 * 300.00600 * 24 23 16 45 45 H 1.08994 * 109.47034 * 180.02562 * 24 23 16 46 46 H 1.08003 * 120.00277 * 179.97438 * 25 7 6 47 47 H 1.07999 * 120.00412 * 179.97438 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9312 -0.7104 1.2306 5 6 2.6435 -0.0134 2.1887 6 6 3.1007 -0.6642 3.3192 7 6 2.8534 -2.0137 3.4877 8 6 3.3559 -2.7242 4.7179 9 6 4.7371 -3.2670 4.4556 10 8 5.2615 -3.0942 3.3758 11 7 5.3897 -3.9443 5.4210 12 6 6.7321 -4.4724 5.1658 13 1 7.2751 -3.7859 4.5162 14 6 7.4820 -4.6213 6.4910 15 6 8.8843 -5.1723 6.2243 16 6 8.7746 -6.5383 5.5441 17 1 8.2319 -7.2252 6.1934 18 6 10.1558 -7.0813 5.2820 19 7 10.8249 -7.8971 6.0502 20 7 11.9665 -8.1552 5.5173 21 6 12.0813 -7.5083 4.3896 22 7 10.9355 -6.8083 4.2080 23 6 8.0247 -6.3893 4.2188 24 6 6.6224 -5.8384 4.4854 25 6 2.1452 -2.7117 2.5273 26 6 1.6841 -2.0600 1.3988 27 1 -0.3934 0.4418 0.7650 28 1 1.7924 -0.5139 -0.8899 29 1 1.5616 2.4678 -1.2086 30 1 1.5878 2.4586 1.2241 31 1 2.8397 1.0402 2.0555 32 1 3.6543 -0.1190 4.0694 33 1 3.3932 -2.0238 5.5523 34 1 2.6832 -3.5460 4.9634 35 1 4.9701 -4.0828 6.2845 36 1 7.5604 -3.6481 6.9755 37 1 6.9390 -5.3078 7.1406 38 1 9.4270 -4.4855 5.5750 39 1 9.4183 -5.2788 7.1685 40 1 12.9319 -7.5274 3.7244 41 1 10.7175 -6.2295 3.4607 42 1 8.5676 -5.7025 3.5694 43 1 7.9470 -7.3624 3.7339 44 1 6.0797 -6.5252 5.1348 45 1 6.0881 -5.7327 3.5413 46 1 1.9523 -3.7662 2.6586 47 1 1.1312 -2.6054 0.6483 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16624780_12335836.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:32:43 Heat of formation + Delta-G solvation = 23.622714 kcal Electronic energy + Delta-G solvation = -28865.057164 eV Core-core repulsion = 24821.857699 eV Total energy + Delta-G solvation = -4043.199465 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 343.168 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -44.12496 -41.38219 -40.47058 -39.29788 -37.71931 -35.73451 -34.57717 -34.11246 -32.44391 -32.08570 -31.94443 -30.27739 -29.06763 -25.91549 -24.65231 -24.17688 -23.82757 -23.36618 -22.38119 -21.95296 -21.45315 -20.93547 -19.37886 -18.54704 -18.15997 -17.68394 -17.02050 -16.82736 -16.65874 -16.39670 -16.32988 -16.14897 -15.98963 -15.64579 -15.28717 -15.17432 -14.91009 -14.72102 -14.48844 -14.24886 -13.95774 -13.87442 -13.49105 -13.25622 -13.16701 -12.95128 -12.80124 -12.51543 -12.44256 -12.33334 -12.25851 -11.98644 -11.84735 -11.81404 -11.60547 -11.56672 -11.30928 -10.90044 -10.56598 -10.19434 -10.14594 -9.86418 -9.63706 -4.94260 0.23556 0.46669 0.81300 1.29867 1.59355 1.59958 1.76609 1.92426 1.96042 2.02628 2.75435 3.07418 3.35523 3.38862 3.46037 3.54359 3.67993 3.74149 3.77559 3.81390 3.88721 3.94727 4.01281 4.01872 4.12672 4.17382 4.20015 4.20847 4.33709 4.34623 4.45412 4.46414 4.49011 4.56672 4.61013 4.68223 4.79910 4.82789 4.87825 4.89134 4.98487 5.05520 5.06749 5.11229 5.13841 5.36879 5.39382 5.54502 5.57575 5.99659 6.03420 6.39450 6.41153 7.17300 7.75807 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.075 4.075 3 Si 0.686 3.314 4 C -0.117 4.117 5 C -0.116 4.116 6 C -0.100 4.100 7 C -0.063 4.063 8 C -0.105 4.105 9 C 0.516 3.484 10 O -0.526 6.526 11 N -0.730 5.730 12 C 0.144 3.856 13 H 0.089 0.911 14 C -0.125 4.125 15 C -0.107 4.107 16 C -0.003 4.003 17 H 0.110 0.890 18 C 0.186 3.814 19 N -0.291 5.291 20 N -0.296 5.296 21 C 0.154 3.846 22 N -0.581 5.581 23 C -0.115 4.115 24 C -0.127 4.127 25 C -0.104 4.104 26 C -0.090 4.090 27 H 0.375 0.625 28 H 0.118 0.882 29 H -0.257 1.257 30 H -0.261 1.261 31 H 0.126 0.874 32 H 0.124 0.876 33 H 0.105 0.895 34 H 0.105 0.895 35 H 0.401 0.599 36 H 0.076 0.924 37 H 0.075 0.925 38 H 0.066 0.934 39 H 0.080 0.920 40 H 0.223 0.777 41 H 0.429 0.571 42 H 0.064 0.936 43 H 0.074 0.926 44 H 0.071 0.929 45 H 0.074 0.926 46 H 0.122 0.878 47 H 0.125 0.875 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.529 2.377 1.235 2.730 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.336 6.336 2 C -0.185 4.185 3 Si 0.587 3.413 4 C -0.117 4.117 5 C -0.134 4.134 6 C -0.118 4.118 7 C -0.063 4.063 8 C -0.144 4.144 9 C 0.302 3.698 10 O -0.401 6.401 11 N -0.382 5.382 12 C 0.040 3.960 13 H 0.107 0.893 14 C -0.163 4.163 15 C -0.146 4.146 16 C -0.024 4.024 17 H 0.128 0.872 18 C -0.083 4.083 19 N -0.132 5.132 20 N -0.135 5.135 21 C -0.135 4.135 22 N -0.194 5.194 23 C -0.153 4.153 24 C -0.166 4.166 25 C -0.122 4.122 26 C -0.108 4.108 27 H 0.223 0.777 28 H 0.135 0.865 29 H -0.183 1.183 30 H -0.185 1.185 31 H 0.144 0.856 32 H 0.142 0.858 33 H 0.123 0.877 34 H 0.123 0.877 35 H 0.236 0.764 36 H 0.095 0.905 37 H 0.094 0.906 38 H 0.085 0.915 39 H 0.098 0.902 40 H 0.239 0.761 41 H 0.269 0.731 42 H 0.083 0.917 43 H 0.093 0.907 44 H 0.090 0.910 45 H 0.093 0.907 46 H 0.140 0.860 47 H 0.143 0.857 Dipole moment (debyes) X Y Z Total from point charges 0.147 2.019 1.185 2.346 hybrid contribution -1.458 0.747 -0.590 1.741 sum -1.312 2.766 0.595 3.119 Atomic orbital electron populations 1.86604 1.17735 1.79984 1.49280 1.25026 0.83911 1.11019 0.98567 0.94872 0.91784 0.74534 0.80076 1.20254 0.99785 0.94997 0.96657 1.20982 0.98617 0.99567 0.94209 1.20899 0.99247 0.93941 0.97725 1.19266 0.97961 0.93740 0.95338 1.20701 0.94236 1.01657 0.97844 1.20566 0.87370 0.77648 0.84241 1.90753 1.68145 1.57229 1.23967 1.46085 1.18099 1.57204 1.16851 1.21006 0.82848 0.95176 0.97011 0.89277 1.21804 0.95599 1.02376 0.96564 1.21530 0.96936 0.94446 1.01672 1.19783 0.86341 0.97686 0.98576 0.87203 1.24864 0.97249 0.99630 0.86602 1.74305 1.00592 1.13970 1.24290 1.74308 1.12100 1.20633 1.06487 1.26586 0.92035 0.95462 0.99416 1.44139 1.15009 1.38787 1.21447 1.21598 0.96025 1.01924 0.95804 1.21889 0.96464 0.96301 1.01910 1.21011 0.97837 0.99600 0.93745 1.20967 0.98693 0.93736 0.97447 0.77720 0.86464 1.18251 1.18547 0.85621 0.85840 0.87701 0.87720 0.76430 0.90495 0.90591 0.91477 0.90162 0.76105 0.73119 0.91699 0.90747 0.91049 0.90703 0.86022 0.85670 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.88 12.83 -35.23 -0.45 -1.33 16 2 C -0.08 -0.03 2.80 36.01 0.10 0.07 16 3 Si 0.69 -0.27 29.88 -169.99 -5.08 -5.35 16 4 C -0.12 -0.11 5.35 -104.62 -0.56 -0.67 16 5 C -0.12 -0.05 8.67 -39.59 -0.34 -0.39 16 6 C -0.10 -0.02 9.70 -39.59 -0.38 -0.41 16 7 C -0.06 -0.01 4.37 -104.63 -0.46 -0.46 16 8 C -0.10 0.28 5.83 -29.04 -0.17 0.11 16 9 C 0.52 -0.32 7.79 -10.98 -0.09 -0.41 16 10 O -0.53 -1.92 15.70 5.56 0.09 -1.84 16 11 N -0.73 2.34 5.08 -53.81 -0.27 2.06 16 12 C 0.14 -0.40 2.45 -67.93 -0.17 -0.57 16 13 H 0.09 -0.07 7.58 -51.93 -0.39 -0.47 16 14 C -0.13 0.51 5.39 -26.73 -0.14 0.37 16 15 C -0.11 0.32 5.19 -26.73 -0.14 0.18 16 16 C 0.00 0.01 2.66 -91.77 -0.24 -0.24 16 17 H 0.11 -0.22 8.14 -51.93 -0.42 -0.64 16 18 C 0.19 0.10 6.99 -154.99 -1.08 -0.99 16 19 N -0.29 -1.34 12.21 32.80 0.40 -0.94 16 20 N -0.30 -1.35 12.21 29.69 0.36 -0.98 16 21 C 0.15 -0.03 13.19 -89.95 -1.19 -1.21 16 22 N -0.58 1.03 5.96 -11.36 -0.07 0.97 16 23 C -0.11 0.36 4.97 -26.73 -0.13 0.22 16 24 C -0.13 0.34 5.50 -26.73 -0.15 0.19 16 25 C -0.10 -0.07 9.70 -39.58 -0.38 -0.45 16 26 C -0.09 -0.11 9.69 -39.58 -0.38 -0.49 16 27 H 0.38 -0.46 8.70 45.56 0.40 -0.07 16 28 H 0.12 -0.01 7.96 -51.93 -0.41 -0.42 16 29 H -0.26 -0.72 7.11 56.52 0.40 -0.32 16 30 H -0.26 -0.33 7.01 56.52 0.40 0.07 16 31 H 0.13 -0.14 4.85 -52.49 -0.25 -0.40 16 32 H 0.12 -0.18 8.06 -52.49 -0.42 -0.61 16 33 H 0.10 -0.49 8.09 -51.93 -0.42 -0.91 16 34 H 0.10 -0.47 8.09 -51.93 -0.42 -0.89 16 35 H 0.40 -2.33 8.60 -40.82 -0.35 -2.68 16 36 H 0.08 -0.32 8.14 -51.93 -0.42 -0.74 16 37 H 0.08 -0.36 8.14 -51.93 -0.42 -0.78 16 38 H 0.07 -0.20 8.14 -51.94 -0.42 -0.63 16 39 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 40 H 0.22 -1.00 8.06 -52.49 -0.42 -1.42 16 41 H 0.43 -2.18 8.29 -40.82 -0.34 -2.52 16 42 H 0.06 -0.24 7.52 -51.93 -0.39 -0.63 16 43 H 0.07 -0.19 8.14 -51.93 -0.42 -0.62 16 44 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 45 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 46 H 0.12 -0.10 8.06 -52.48 -0.42 -0.52 16 47 H 0.13 0.08 8.06 -52.49 -0.42 -0.34 16 LS Contribution 385.25 15.07 5.81 5.81 Total: 0.00 -12.00 385.25 -11.98 -23.98 By element: Atomic # 1 Polarization: -10.37 SS G_CDS: -6.86 Total: -17.23 kcal Atomic # 6 Polarization: 0.76 SS G_CDS: -5.91 Total: -5.14 kcal Atomic # 7 Polarization: 0.68 SS G_CDS: 0.42 Total: 1.10 kcal Atomic # 8 Polarization: -2.80 SS G_CDS: -0.36 Total: -3.17 kcal Atomic # 14 Polarization: -0.27 SS G_CDS: -5.08 Total: -5.35 kcal Total LS contribution 5.81 Total: 5.81 kcal Total: -12.00 -11.98 -23.98 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16624780_12335836.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 47.606 kcal (2) G-P(sol) polarization free energy of solvation -11.999 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 35.607 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.984 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.983 kcal (6) G-S(sol) free energy of system = (1) + (5) 23.623 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds