Wall clock time and date at job start Sun Mar 7 2021 05:33:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86302 * 109.46915 * 2 1 4 4 C 1.50695 * 109.47189 * 239.99762 * 2 1 3 5 5 C 1.38330 * 119.92093 * 120.00294 * 4 2 1 6 6 C 1.38461 * 120.27999 * 179.97438 * 5 4 2 7 7 Br 1.89103 * 119.93321 * 179.97438 * 6 5 4 8 8 C 1.38028 * 120.12642 * 359.97438 * 6 5 4 9 9 C 1.39584 * 119.84286 * 0.02562 * 8 6 5 10 10 C 1.47851 * 120.13756 * 179.97438 * 9 8 6 11 11 O 1.21551 * 119.99713 * 179.97438 * 10 9 8 12 12 N 1.34776 * 119.99914 * 359.97438 * 10 9 8 13 13 C 1.46507 * 119.99714 * 179.97438 * 12 10 9 14 14 H 1.08999 * 109.47215 * 325.00357 * 13 12 10 15 15 C 1.53006 * 109.46637 * 85.00275 * 13 12 10 16 16 C 1.52997 * 109.46803 * 179.97438 * 15 13 12 17 17 C 1.52995 * 109.47253 * 300.00295 * 16 15 13 18 18 H 1.08999 * 109.46957 * 299.99844 * 17 16 15 19 19 C 1.50700 * 109.47187 * 179.97438 * 17 16 15 20 20 N 1.30519 * 126.34573 * 144.96877 * 19 17 16 21 21 N 1.28604 * 109.67489 * 180.02562 * 20 19 17 22 22 C 1.30518 * 109.66680 * 0.02562 * 21 20 19 23 23 N 1.35487 * 107.31212 * 0.02562 * 22 21 20 24 24 C 1.52997 * 109.47362 * 60.00007 * 17 16 15 25 25 C 1.52989 * 109.46917 * 205.00055 * 13 12 10 26 26 C 1.37980 * 119.92337 * 300.25287 * 4 2 1 27 27 H 0.96699 * 113.99487 * 60.00489 * 1 2 3 28 28 H 1.09000 * 109.47260 * 119.99370 * 2 1 3 29 29 H 1.48505 * 109.99805 * 298.67689 * 3 2 1 30 30 H 1.48498 * 110.00177 * 59.99483 * 3 2 1 31 31 H 1.08004 * 119.85372 * 0.02562 * 5 4 2 32 32 H 1.08004 * 120.07491 * 179.97438 * 8 6 5 33 33 H 0.97001 * 120.00300 * 0.02562 * 12 10 9 34 34 H 1.09001 * 109.47196 * 299.99700 * 15 13 12 35 35 H 1.08999 * 109.47251 * 60.00104 * 15 13 12 36 36 H 1.09001 * 109.47111 * 179.97438 * 16 15 13 37 37 H 1.08999 * 109.47011 * 60.00105 * 16 15 13 38 38 H 1.08000 * 126.34337 * 179.97438 * 22 21 20 39 39 H 0.97003 * 126.98189 * 179.97438 * 23 22 21 40 40 H 1.08999 * 109.47218 * 59.99996 * 24 17 16 41 41 H 1.09001 * 109.47102 * 180.02562 * 24 17 16 42 42 H 1.08998 * 109.47586 * 60.00641 * 25 13 12 43 43 H 1.08999 * 109.47425 * 300.00174 * 25 13 12 44 44 H 1.08001 * 120.06241 * 0.02562 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 2.7266 -0.0366 -2.1399 6 6 3.1927 -0.6823 -3.2726 7 35 4.2786 0.2484 -4.5097 8 6 2.8662 -2.0039 -3.5004 9 6 2.0641 -2.6888 -2.5861 10 6 1.7099 -4.1044 -2.8240 11 8 1.0117 -4.6985 -2.0259 12 7 2.1613 -4.7361 -3.9257 13 6 1.8108 -6.1390 -4.1610 14 1 1.7635 -6.6664 -3.2083 15 6 0.4489 -6.2149 -4.8542 16 6 0.0831 -7.6799 -5.1006 17 6 1.1453 -8.3281 -5.9907 18 1 1.1925 -7.8002 -6.9432 19 6 0.7854 -9.7713 -6.2329 20 7 0.9942 -10.4470 -7.3298 21 7 0.5613 -11.6495 -7.1866 22 6 0.0562 -11.7952 -5.9920 23 7 0.1831 -10.6073 -5.3530 24 6 2.5072 -8.2521 -5.2976 25 6 2.8729 -6.7875 -5.0509 26 6 1.5928 -2.0299 -1.4498 27 1 -0.3932 0.4416 -0.7651 28 1 1.7924 -0.5137 0.8900 29 1 1.5879 2.4585 -1.2243 30 1 1.5614 2.4680 1.2084 31 1 2.9857 0.9972 -1.9651 32 1 3.2299 -2.5066 -4.3844 33 1 2.7189 -4.2621 -4.5624 34 1 -0.3078 -5.7528 -4.2202 35 1 0.4962 -5.6874 -5.8069 36 1 -0.8873 -7.7341 -5.5940 37 1 0.0359 -8.2077 -4.1481 38 1 -0.3825 -12.6956 -5.5880 39 1 -0.0993 -10.3979 -4.4489 40 1 2.4600 -8.7799 -4.3451 41 1 3.2640 -8.7135 -5.9320 42 1 3.8431 -6.7335 -4.5571 43 1 2.9202 -6.2601 -6.0036 44 1 0.9681 -2.5532 -0.7410 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16624780_12335870.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:33:17 Heat of formation + Delta-G solvation = 34.069922 kcal Electronic energy + Delta-G solvation = -29187.318532 eV Core-core repulsion = 24960.291708 eV Total energy + Delta-G solvation = -4227.026824 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 407.063 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -44.13084 -41.74677 -40.53045 -39.25694 -37.87109 -35.90027 -34.61997 -33.70308 -33.49084 -32.14663 -32.11194 -30.55300 -29.65475 -27.14409 -25.83069 -24.46555 -24.07770 -23.30383 -22.90059 -22.18546 -21.55638 -21.03588 -19.39515 -19.25939 -18.19221 -17.72564 -17.50111 -16.85918 -16.78572 -16.50788 -16.38658 -16.32421 -15.93698 -15.76322 -15.37661 -15.24816 -15.05999 -14.91922 -14.32678 -14.30686 -14.20028 -13.84630 -13.50095 -13.35549 -13.08576 -12.86616 -12.55739 -12.46776 -12.35838 -12.35119 -12.05194 -11.89431 -11.87603 -11.81977 -11.63648 -11.53894 -11.32959 -11.13734 -10.79568 -10.43451 -10.22477 -10.18290 -9.99613 -5.11099 -0.58805 -0.25860 0.33282 0.80688 1.08281 1.44752 1.50282 1.75163 1.81097 1.88173 1.91924 2.41620 3.04511 3.11655 3.20568 3.27576 3.38330 3.44488 3.63337 3.67539 3.76492 3.78585 3.87827 3.90772 3.98472 4.09718 4.12263 4.13202 4.16881 4.20346 4.32499 4.42510 4.43063 4.47366 4.58287 4.65642 4.77451 4.80171 4.84181 4.85952 4.86622 4.97833 5.03926 5.08674 5.11520 5.24828 5.33062 6.02813 6.23182 6.24979 6.98921 7.75309 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.525 6.525 2 C -0.074 4.074 3 Si 0.679 3.321 4 C -0.118 4.118 5 C -0.063 4.063 6 C -0.094 4.094 7 Br -0.032 7.032 8 C -0.053 4.053 9 C -0.129 4.129 10 C 0.563 3.437 11 O -0.526 6.526 12 N -0.722 5.722 13 C 0.144 3.856 14 H 0.092 0.908 15 C -0.128 4.128 16 C -0.115 4.115 17 C -0.003 4.003 18 H 0.110 0.890 19 C 0.186 3.814 20 N -0.291 5.291 21 N -0.296 5.296 22 C 0.154 3.846 23 N -0.581 5.581 24 C -0.106 4.106 25 C -0.126 4.126 26 C -0.018 4.018 27 H 0.378 0.622 28 H 0.126 0.874 29 H -0.255 1.255 30 H -0.250 1.250 31 H 0.142 0.858 32 H 0.139 0.861 33 H 0.401 0.599 34 H 0.075 0.925 35 H 0.072 0.928 36 H 0.075 0.925 37 H 0.065 0.935 38 H 0.223 0.777 39 H 0.429 0.571 40 H 0.067 0.933 41 H 0.081 0.919 42 H 0.078 0.922 43 H 0.076 0.924 44 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.322 2.483 2.299 4.103 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.331 6.331 2 C -0.183 4.183 3 Si 0.579 3.421 4 C -0.119 4.119 5 C -0.083 4.083 6 C -0.174 4.174 7 Br 0.054 6.946 8 C -0.074 4.074 9 C -0.133 4.133 10 C 0.350 3.650 11 O -0.403 6.403 12 N -0.374 5.374 13 C 0.040 3.960 14 H 0.111 0.889 15 C -0.167 4.167 16 C -0.153 4.153 17 C -0.024 4.024 18 H 0.129 0.871 19 C -0.084 4.084 20 N -0.131 5.131 21 N -0.135 5.135 22 C -0.135 4.135 23 N -0.194 5.194 24 C -0.145 4.145 25 C -0.165 4.165 26 C -0.037 4.037 27 H 0.225 0.775 28 H 0.144 0.856 29 H -0.180 1.180 30 H -0.175 1.175 31 H 0.160 0.840 32 H 0.157 0.843 33 H 0.236 0.764 34 H 0.094 0.906 35 H 0.091 0.909 36 H 0.093 0.907 37 H 0.084 0.916 38 H 0.239 0.761 39 H 0.269 0.731 40 H 0.086 0.914 41 H 0.099 0.901 42 H 0.097 0.903 43 H 0.095 0.905 44 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges 2.585 2.519 1.365 3.859 hybrid contribution -1.640 0.067 1.156 2.008 sum 0.945 2.586 2.521 3.733 Atomic orbital electron populations 1.86645 1.17177 1.79891 1.49364 1.25054 0.84339 1.11064 0.97886 0.95084 0.91632 0.74273 0.81071 1.20324 0.99265 0.94848 0.97452 1.21229 0.95151 0.99981 0.91921 1.21652 1.02952 0.95626 0.97157 1.96857 1.65699 1.75403 1.56631 1.21291 0.95149 0.92545 0.98404 1.19959 1.01851 0.94287 0.97192 1.18101 0.79744 0.85917 0.81237 1.90820 1.37158 1.66964 1.45368 1.45975 1.53730 1.13206 1.24454 1.21080 0.94174 0.80883 0.99877 0.88950 1.21902 0.97214 0.96035 1.01510 1.21597 0.98463 0.95950 0.99329 1.19783 0.95704 0.85241 1.01693 0.87144 1.24850 0.99458 0.96356 0.87690 1.74307 1.19416 0.99264 1.20137 1.74312 1.13286 1.10827 1.15085 1.26588 1.03982 0.91258 0.91661 1.44136 1.47116 1.11111 1.17017 1.21520 0.95737 0.96270 1.01020 1.21808 0.98623 0.95671 1.00351 1.21294 0.94436 0.92888 0.95063 0.77461 0.85638 1.17965 1.17475 0.84033 0.84341 0.76350 0.90590 0.90908 0.90651 0.91640 0.76105 0.73123 0.91412 0.90051 0.90326 0.90492 0.83397 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -0.04 12.76 -35.23 -0.45 -0.49 16 2 C -0.07 0.11 2.82 36.00 0.10 0.22 16 3 Si 0.68 -1.43 29.78 -169.99 -5.06 -6.49 16 4 C -0.12 0.15 5.39 -104.68 -0.56 -0.41 16 5 C -0.06 0.11 8.41 -39.47 -0.33 -0.22 16 6 C -0.09 0.14 6.22 -39.58 -0.25 -0.11 16 7 Br -0.03 0.04 33.69 -68.01 -2.29 -2.25 16 8 C -0.05 0.11 9.28 -39.16 -0.36 -0.25 16 9 C -0.13 0.07 5.87 -104.97 -0.62 -0.54 16 10 C 0.56 0.26 7.74 -12.33 -0.10 0.17 16 11 O -0.53 -2.12 16.01 5.32 0.09 -2.04 16 12 N -0.72 1.75 5.03 -54.75 -0.28 1.48 16 13 C 0.14 -0.38 2.45 -67.93 -0.17 -0.55 16 14 H 0.09 -0.09 7.58 -51.93 -0.39 -0.49 16 15 C -0.13 0.33 5.50 -26.73 -0.15 0.18 16 16 C -0.11 0.36 4.97 -26.74 -0.13 0.23 16 17 C 0.00 0.01 2.66 -91.78 -0.24 -0.24 16 18 H 0.11 -0.23 8.14 -51.93 -0.42 -0.65 16 19 C 0.19 0.09 6.99 -154.99 -1.08 -0.99 16 20 N -0.29 -1.34 12.21 32.80 0.40 -0.94 16 21 N -0.30 -1.35 12.21 29.69 0.36 -0.98 16 22 C 0.15 -0.03 13.19 -89.95 -1.19 -1.21 16 23 N -0.58 1.05 5.96 -11.36 -0.07 0.99 16 24 C -0.11 0.33 5.18 -26.76 -0.14 0.19 16 25 C -0.13 0.51 5.39 -26.76 -0.14 0.37 16 26 C -0.02 0.00 9.15 -39.18 -0.36 -0.36 16 27 H 0.38 -1.05 8.70 45.56 0.40 -0.65 16 28 H 0.13 -0.29 7.96 -51.93 -0.41 -0.71 16 29 H -0.26 0.07 7.11 56.52 0.40 0.48 16 30 H -0.25 -0.32 7.11 56.52 0.40 0.09 16 31 H 0.14 -0.42 4.86 -52.48 -0.26 -0.68 16 32 H 0.14 -0.61 6.41 -52.48 -0.34 -0.95 16 33 H 0.40 -1.90 6.64 -40.82 -0.27 -2.17 16 34 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 35 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 36 H 0.07 -0.20 8.14 -51.93 -0.42 -0.62 16 37 H 0.06 -0.25 7.52 -51.93 -0.39 -0.64 16 38 H 0.22 -0.99 8.06 -52.49 -0.42 -1.42 16 39 H 0.43 -2.20 8.28 -40.82 -0.34 -2.54 16 40 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 41 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 42 H 0.08 -0.32 8.14 -51.93 -0.42 -0.75 16 43 H 0.08 -0.37 8.14 -51.93 -0.42 -0.79 16 44 H 0.15 0.13 7.65 -52.49 -0.40 -0.27 16 LS Contribution 381.84 15.07 5.75 5.75 Total: 0.00 -10.94 381.84 -12.66 -23.61 By element: Atomic # 1 Polarization: -9.70 SS G_CDS: -5.40 Total: -15.10 kcal Atomic # 6 Polarization: 2.18 SS G_CDS: -5.72 Total: -3.53 kcal Atomic # 7 Polarization: 0.12 SS G_CDS: 0.42 Total: 0.54 kcal Atomic # 8 Polarization: -2.17 SS G_CDS: -0.36 Total: -2.53 kcal Atomic # 14 Polarization: -1.43 SS G_CDS: -5.06 Total: -6.49 kcal Atomic # 35 Polarization: 0.04 SS G_CDS: -2.29 Total: -2.25 kcal Total LS contribution 5.75 Total: 5.75 kcal Total: -10.94 -12.66 -23.61 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16624780_12335870.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 57.679 kcal (2) G-P(sol) polarization free energy of solvation -10.944 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 46.735 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.665 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.609 kcal (6) G-S(sol) free energy of system = (1) + (5) 34.070 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds