Wall clock time and date at job start Sun Mar 7 2021 05:33:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86302 * 109.46738 * 2 1 4 4 C 1.50697 * 109.47206 * 119.99525 * 2 1 3 5 5 C 1.38399 * 119.82407 * 65.00051 * 4 2 1 6 6 C 1.37896 * 120.17138 * 179.97438 * 5 4 2 7 7 C 1.39838 * 119.82155 * 0.02562 * 6 5 4 8 8 C 1.47216 * 120.16385 * 179.97438 * 7 6 5 9 9 C 1.34808 * 119.99712 * 180.02562 * 8 7 6 10 10 C 1.46426 * 120.00131 * 180.02562 * 9 8 7 11 11 O 1.21698 * 119.99590 * 359.97438 * 10 9 8 12 12 N 1.34773 * 120.00011 * 179.97438 * 10 9 8 13 13 C 1.46506 * 119.99969 * 179.97438 * 12 10 9 14 14 H 1.09005 * 109.46722 * 324.72200 * 13 12 10 15 15 C 1.52995 * 109.47182 * 84.72073 * 13 12 10 16 16 C 1.52996 * 109.46992 * 180.02562 * 15 13 12 17 17 C 1.53002 * 109.47258 * 299.99882 * 16 15 13 18 18 H 1.09008 * 109.46926 * 300.00538 * 17 16 15 19 19 C 1.50696 * 109.47602 * 180.02562 * 17 16 15 20 20 N 1.30518 * 126.35098 * 144.68843 * 19 17 16 21 21 N 1.28589 * 109.67535 * 179.82634 * 20 19 17 22 22 C 1.30525 * 109.67205 * 0.44744 * 21 20 19 23 23 N 1.35487 * 107.30427 * 359.73162 * 22 21 20 24 24 C 1.52998 * 109.46851 * 59.99809 * 17 16 15 25 25 C 1.52996 * 109.47346 * 300.00138 * 24 17 16 26 26 C 1.39832 * 119.66631 * 0.25026 * 7 6 5 27 27 C 1.37897 * 119.82160 * 359.47019 * 26 7 6 28 28 H 0.96696 * 114.00095 * 60.00050 * 1 2 3 29 29 H 1.08997 * 109.47209 * 240.00213 * 2 1 3 30 30 H 1.48503 * 110.00039 * 298.67780 * 3 2 1 31 31 H 1.48496 * 110.00356 * 60.00023 * 3 2 1 32 32 H 1.08001 * 119.92014 * 0.02562 * 5 4 2 33 33 H 1.07996 * 120.09042 * 180.02562 * 6 5 4 34 34 H 1.07998 * 119.99988 * 359.97438 * 8 7 6 35 35 H 1.08004 * 119.99844 * 359.97438 * 9 8 7 36 36 H 0.97005 * 120.00161 * 359.71927 * 12 10 9 37 37 H 1.09007 * 109.47360 * 299.99766 * 15 13 12 38 38 H 1.08997 * 109.47379 * 60.00113 * 15 13 12 39 39 H 1.09008 * 109.47401 * 180.02562 * 16 15 13 40 40 H 1.09001 * 109.47741 * 59.99690 * 16 15 13 41 41 H 1.07997 * 126.34469 * 179.73504 * 22 21 20 42 42 H 0.97011 * 126.97888 * 180.02562 * 23 22 21 43 43 H 1.09010 * 109.46944 * 180.02562 * 24 17 16 44 44 H 1.08997 * 109.47198 * 60.00475 * 24 17 16 45 45 H 1.08997 * 109.47248 * 300.00307 * 25 24 17 46 46 H 1.09005 * 109.46905 * 179.97438 * 25 24 17 47 47 H 1.07999 * 120.09133 * 179.74990 * 26 7 6 48 48 H 1.08000 * 119.91259 * 180.27953 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7103 1.2305 5 6 1.6824 -2.0617 1.3950 6 6 2.1392 -2.7189 2.5179 7 6 2.8552 -2.0161 3.4920 8 6 3.3459 -2.7101 4.6940 9 6 4.0353 -2.0291 5.6312 10 6 4.5239 -2.7194 6.8265 11 8 4.3071 -3.9078 6.9741 12 7 5.2135 -2.0387 7.7632 13 6 5.7019 -2.7292 8.9595 14 1 4.9815 -3.4905 9.2590 15 6 7.0463 -3.3919 8.6527 16 6 7.5560 -4.1136 9.9018 17 6 7.7325 -3.1040 11.0378 18 1 8.4529 -2.3426 10.7385 19 6 8.2351 -3.8146 12.2680 20 7 9.0697 -3.3371 13.1505 21 7 9.2753 -4.2123 14.0699 22 6 8.5885 -5.2916 13.8106 23 7 7.9088 -5.0700 12.6597 24 6 6.3880 -2.4413 11.3445 25 6 5.8784 -1.7196 10.0954 26 6 3.0977 -0.6495 3.3213 27 6 2.6393 -0.0078 2.1901 28 1 -0.3933 0.4417 -0.7650 29 1 1.7924 -0.5138 -0.8900 30 1 1.5878 2.4586 -1.2243 31 1 1.5614 2.4680 1.2084 32 1 1.1297 -2.6033 0.6416 33 1 1.9446 -3.7736 2.6447 34 1 3.1528 -3.7645 4.8254 35 1 4.2279 -0.9745 5.4999 36 1 5.3898 -1.0923 7.6436 37 1 6.9205 -4.1116 7.8437 38 1 7.7667 -2.6307 8.3531 39 1 8.5141 -4.5854 9.6834 40 1 6.8355 -4.8749 10.2010 41 1 8.5662 -6.1939 14.4036 42 1 7.3098 -5.6851 12.2081 43 1 6.5139 -1.7216 12.1536 44 1 5.6676 -3.2025 11.6437 45 1 6.5988 -0.9584 9.7962 46 1 4.9203 -1.2478 10.3139 47 1 3.6464 -0.0992 4.0712 48 1 2.8297 1.0466 2.0547 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16624780_12360594.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:33:26 Heat of formation + Delta-G solvation = 44.632162 kcal Electronic energy + Delta-G solvation = -29368.035716 eV Core-core repulsion = 25197.521148 eV Total energy + Delta-G solvation = -4170.514568 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 355.168 amu Computer time = 1.25 seconds Orbital eigenvalues (eV) -44.10574 -41.16602 -40.58544 -39.34388 -37.91399 -35.76072 -35.15346 -34.54790 -32.56999 -32.21568 -32.05248 -31.34652 -29.62504 -27.19015 -25.05090 -24.26739 -24.08886 -23.68216 -23.12069 -22.19492 -21.73878 -21.24888 -20.28811 -19.35571 -18.66880 -18.58956 -17.71974 -17.22686 -16.83181 -16.71607 -16.40095 -16.26183 -16.15562 -15.80571 -15.48525 -15.30203 -15.25957 -14.92298 -14.79561 -14.43718 -14.16460 -14.08075 -13.90916 -13.78307 -13.62639 -13.44088 -13.02202 -12.81513 -12.49864 -12.41408 -12.35984 -12.29214 -12.11393 -11.82936 -11.79116 -11.74686 -11.57624 -11.33285 -11.28642 -10.90860 -10.57814 -10.17183 -10.11732 -10.03520 -9.28905 -5.05203 -0.57889 0.33810 0.83253 0.87858 1.18692 1.51177 1.78711 1.86785 1.94309 2.10185 2.26344 2.72361 3.09432 3.24687 3.37924 3.49477 3.54082 3.66694 3.71346 3.75849 3.81228 3.83708 3.96348 4.03580 4.10100 4.11346 4.16777 4.20580 4.22010 4.24759 4.30346 4.36052 4.46521 4.48965 4.51880 4.64084 4.77036 4.83149 4.85630 4.89607 4.91154 4.92416 5.02781 5.06062 5.10514 5.14521 5.17130 5.32964 5.42941 5.45338 5.55697 5.82540 6.05380 6.33918 6.47136 7.21943 7.77791 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.535 6.535 2 C -0.079 4.079 3 Si 0.684 3.316 4 C -0.060 4.060 5 C -0.094 4.094 6 C -0.092 4.092 7 C -0.075 4.075 8 C -0.013 4.013 9 C -0.217 4.217 10 C 0.550 3.450 11 O -0.544 6.544 12 N -0.724 5.724 13 C 0.144 3.856 14 H 0.089 0.911 15 C -0.127 4.127 16 C -0.115 4.115 17 C -0.003 4.003 18 H 0.110 0.890 19 C 0.186 3.814 20 N -0.291 5.291 21 N -0.296 5.296 22 C 0.154 3.846 23 N -0.581 5.581 24 C -0.107 4.107 25 C -0.126 4.126 26 C -0.094 4.094 27 C -0.117 4.117 28 H 0.381 0.619 29 H 0.078 0.922 30 H -0.260 1.260 31 H -0.255 1.255 32 H 0.129 0.871 33 H 0.132 0.868 34 H 0.137 0.863 35 H 0.131 0.869 36 H 0.402 0.598 37 H 0.075 0.925 38 H 0.071 0.929 39 H 0.074 0.926 40 H 0.064 0.936 41 H 0.223 0.777 42 H 0.429 0.571 43 H 0.080 0.920 44 H 0.066 0.934 45 H 0.076 0.924 46 H 0.077 0.923 47 H 0.133 0.867 48 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.638 0.618 -4.672 4.756 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.343 6.343 2 C -0.189 4.189 3 Si 0.585 3.415 4 C -0.060 4.060 5 C -0.112 4.112 6 C -0.110 4.110 7 C -0.075 4.075 8 C -0.033 4.033 9 C -0.238 4.238 10 C 0.339 3.661 11 O -0.423 6.423 12 N -0.374 5.374 13 C 0.039 3.961 14 H 0.108 0.892 15 C -0.166 4.166 16 C -0.153 4.153 17 C -0.024 4.024 18 H 0.128 0.872 19 C -0.083 4.083 20 N -0.131 5.131 21 N -0.136 5.136 22 C -0.135 4.135 23 N -0.194 5.194 24 C -0.146 4.146 25 C -0.164 4.164 26 C -0.112 4.112 27 C -0.135 4.135 28 H 0.229 0.771 29 H 0.096 0.904 30 H -0.186 1.186 31 H -0.179 1.179 32 H 0.147 0.853 33 H 0.150 0.850 34 H 0.155 0.845 35 H 0.149 0.851 36 H 0.237 0.763 37 H 0.094 0.906 38 H 0.090 0.910 39 H 0.093 0.907 40 H 0.083 0.917 41 H 0.239 0.761 42 H 0.269 0.731 43 H 0.098 0.902 44 H 0.085 0.915 45 H 0.094 0.906 46 H 0.095 0.905 47 H 0.150 0.850 48 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges 0.152 1.359 -3.176 3.458 hybrid contribution -2.201 -1.055 -1.367 2.797 sum -2.048 0.305 -4.543 4.993 Atomic orbital electron populations 1.86592 1.17640 1.80197 1.49849 1.24849 0.84617 1.11123 0.98314 0.95033 0.91609 0.74538 0.80322 1.19423 0.97579 0.94116 0.94900 1.20975 0.98602 0.93801 0.97839 1.21440 0.96269 1.00172 0.93108 1.19059 0.99912 0.93635 0.94867 1.22406 0.90682 0.99972 0.90199 1.22892 1.04416 1.00905 0.95556 1.18339 0.77653 0.86792 0.83302 1.90828 1.57851 1.15296 1.78307 1.45932 1.56635 1.13379 1.21449 1.21019 0.95801 0.95066 0.84201 0.89249 1.21895 0.96582 1.00460 0.97654 1.21603 1.01969 0.97499 0.94270 1.19785 0.98238 0.96990 0.87389 0.87173 1.24867 0.98873 0.84391 1.00190 1.74300 1.14457 1.23609 1.00784 1.74305 1.20502 0.98847 1.19899 1.26583 0.95689 1.02231 0.89026 1.44138 1.38252 1.15142 1.21832 1.21528 0.94800 1.00233 0.98007 1.21806 1.02525 0.98002 0.94030 1.21327 0.99003 0.93593 0.97303 1.20938 0.99052 0.99649 0.93846 0.77106 0.90383 1.18559 1.17944 0.85318 0.85029 0.84502 0.85146 0.76323 0.90642 0.90982 0.90726 0.91705 0.76116 0.73114 0.90158 0.91484 0.90551 0.90468 0.84970 0.85201 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.34 12.81 -35.23 -0.45 -0.79 16 2 C -0.08 0.06 2.79 36.00 0.10 0.16 16 3 Si 0.68 -1.10 29.83 -169.99 -5.07 -6.17 16 4 C -0.06 -0.02 5.39 -104.50 -0.56 -0.59 16 5 C -0.09 -0.04 9.66 -39.65 -0.38 -0.42 16 6 C -0.09 0.00 9.80 -39.11 -0.38 -0.39 16 7 C -0.07 0.00 5.87 -105.06 -0.62 -0.62 16 8 C -0.01 0.00 9.46 -37.15 -0.35 -0.35 16 9 C -0.22 0.20 9.41 -37.50 -0.35 -0.15 16 10 C 0.55 0.48 7.70 -12.97 -0.10 0.38 16 11 O -0.54 -2.57 15.90 5.19 0.08 -2.49 16 12 N -0.72 1.43 5.07 -55.19 -0.28 1.15 16 13 C 0.14 -0.29 2.45 -67.93 -0.17 -0.45 16 14 H 0.09 -0.01 7.59 -51.93 -0.39 -0.40 16 15 C -0.13 0.26 5.49 -26.74 -0.15 0.12 16 16 C -0.11 0.31 4.97 -26.73 -0.13 0.18 16 17 C 0.00 0.01 2.66 -91.77 -0.24 -0.24 16 18 H 0.11 -0.18 8.14 -51.92 -0.42 -0.61 16 19 C 0.19 0.15 6.99 -154.99 -1.08 -0.94 16 20 N -0.29 -1.41 12.21 32.79 0.40 -1.01 16 21 N -0.30 -1.41 12.21 29.69 0.36 -1.05 16 22 C 0.15 0.00 13.19 -89.95 -1.19 -1.18 16 23 N -0.58 0.90 5.96 -11.37 -0.07 0.83 16 24 C -0.11 0.28 5.19 -26.73 -0.14 0.14 16 25 C -0.13 0.44 5.39 -26.73 -0.14 0.29 16 26 C -0.09 0.08 9.41 -39.11 -0.37 -0.29 16 27 C -0.12 0.05 8.65 -39.65 -0.34 -0.29 16 28 H 0.38 -1.26 8.74 45.56 0.40 -0.86 16 29 H 0.08 -0.19 7.96 -51.93 -0.41 -0.60 16 30 H -0.26 -0.13 7.11 56.52 0.40 0.27 16 31 H -0.25 -0.36 7.04 56.52 0.40 0.04 16 32 H 0.13 -0.06 8.06 -52.49 -0.42 -0.48 16 33 H 0.13 -0.21 8.06 -52.49 -0.42 -0.63 16 34 H 0.14 0.07 7.52 -52.49 -0.39 -0.33 16 35 H 0.13 -0.47 6.07 -52.48 -0.32 -0.79 16 36 H 0.40 -1.85 8.58 -40.82 -0.35 -2.20 16 37 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 38 H 0.07 -0.19 8.14 -51.93 -0.42 -0.61 16 39 H 0.07 -0.17 8.14 -51.92 -0.42 -0.60 16 40 H 0.06 -0.22 7.52 -51.93 -0.39 -0.61 16 41 H 0.22 -0.95 8.06 -52.49 -0.42 -1.38 16 42 H 0.43 -2.08 8.29 -40.82 -0.34 -2.42 16 43 H 0.08 -0.13 8.14 -51.92 -0.42 -0.56 16 44 H 0.07 -0.18 8.14 -51.93 -0.42 -0.60 16 45 H 0.08 -0.32 8.14 -51.93 -0.42 -0.75 16 46 H 0.08 -0.26 8.14 -51.93 -0.42 -0.69 16 47 H 0.13 -0.43 6.17 -52.49 -0.32 -0.76 16 48 H 0.13 -0.27 4.84 -52.49 -0.25 -0.53 16 LS Contribution 395.20 15.07 5.96 5.96 Total: 0.00 -12.41 395.20 -12.30 -24.72 By element: Atomic # 1 Polarization: -9.87 SS G_CDS: -6.63 Total: -16.50 kcal Atomic # 6 Polarization: 1.96 SS G_CDS: -6.60 Total: -4.64 kcal Atomic # 7 Polarization: -0.49 SS G_CDS: 0.42 Total: -0.07 kcal Atomic # 8 Polarization: -2.91 SS G_CDS: -0.37 Total: -3.28 kcal Atomic # 14 Polarization: -1.10 SS G_CDS: -5.07 Total: -6.17 kcal Total LS contribution 5.96 Total: 5.96 kcal Total: -12.41 -12.30 -24.72 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16624780_12360594.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 69.348 kcal (2) G-P(sol) polarization free energy of solvation -12.413 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 56.935 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.303 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.716 kcal (6) G-S(sol) free energy of system = (1) + (5) 44.632 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.25 seconds