Wall clock time and date at job start Sun Mar 7 2021 05:33:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86296 * 109.47360 * 2 1 4 4 C 1.50700 * 109.46973 * 120.00185 * 2 1 3 5 5 C 1.38616 * 119.84269 * 74.99782 * 4 2 1 6 6 F 1.35103 * 119.91592 * 0.02562 * 5 4 2 7 7 C 1.38108 * 120.16419 * 179.97438 * 5 4 2 8 8 C 1.39618 * 119.85160 * 0.02562 * 7 5 4 9 9 C 1.47701 * 120.15261 * 179.97438 * 8 7 5 10 10 O 1.21566 * 119.99984 * 179.97438 * 9 8 7 11 11 N 1.34773 * 119.99982 * 0.02562 * 9 8 7 12 12 C 1.46504 * 120.00111 * 179.97438 * 11 9 8 13 13 H 1.09001 * 109.46891 * 325.00262 * 12 11 9 14 14 C 1.53006 * 109.46883 * 84.99828 * 12 11 9 15 15 C 1.52997 * 109.47127 * 180.02562 * 14 12 11 16 16 C 1.53000 * 109.47060 * 300.00449 * 15 14 12 17 17 H 1.09001 * 109.47194 * 299.99650 * 16 15 14 18 18 C 1.50706 * 109.46735 * 180.02562 * 16 15 14 19 19 N 1.30515 * 126.35004 * 94.69301 * 18 16 15 20 20 N 1.28590 * 109.67660 * 179.82192 * 19 18 16 21 21 C 1.30526 * 109.67064 * 0.44387 * 20 19 18 22 22 N 1.35490 * 126.34416 * 274.99287 * 18 16 15 23 23 C 1.52996 * 109.47328 * 60.00126 * 16 15 14 24 24 C 1.52997 * 109.47417 * 204.99914 * 12 11 9 25 25 C 1.39835 * 119.69069 * 0.27611 * 8 7 5 26 26 F 1.35101 * 120.08288 * 179.69953 * 25 8 7 27 27 C 1.38226 * 119.84297 * 255.02208 * 4 2 1 28 28 H 0.96703 * 113.99683 * 59.99520 * 1 2 3 29 29 H 1.08997 * 109.46570 * 239.99795 * 2 1 3 30 30 H 1.48503 * 109.99937 * 59.99864 * 3 2 1 31 31 H 1.48496 * 110.00108 * 181.31697 * 3 2 1 32 32 H 1.07998 * 120.07211 * 180.02562 * 7 5 4 33 33 H 0.97003 * 120.00265 * 359.97438 * 11 9 8 34 34 H 1.08998 * 109.46505 * 59.99948 * 14 12 11 35 35 H 1.08996 * 109.46884 * 300.00829 * 14 12 11 36 36 H 1.09002 * 109.47153 * 180.02562 * 15 14 12 37 37 H 1.09001 * 109.46832 * 60.00321 * 15 14 12 38 38 H 1.07994 * 126.34983 * 179.73408 * 21 20 19 39 39 H 0.97002 * 126.98013 * 0.02562 * 22 18 16 40 40 H 1.08992 * 109.47554 * 59.99639 * 23 16 15 41 41 H 1.09004 * 109.47108 * 179.97438 * 23 16 15 42 42 H 1.09002 * 109.47045 * 60.00127 * 24 12 11 43 43 H 1.09001 * 109.47375 * 300.00052 * 24 12 11 44 44 H 1.08007 * 119.92709 * 359.97183 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 1.2305 5 6 1.8678 -2.0933 1.3028 6 9 1.3566 -2.7992 0.2705 7 6 2.3267 -2.7512 2.4270 8 6 2.8552 -2.0203 3.4928 9 6 3.3474 -2.7171 4.6985 10 8 3.8074 -2.0780 5.6246 11 7 3.2874 -4.0615 4.7715 12 6 3.7761 -4.7527 5.9673 13 1 4.6394 -4.2207 6.3671 14 6 2.6683 -4.7924 7.0219 15 6 3.1788 -5.5137 8.2709 16 6 3.5855 -6.9423 7.9043 17 1 2.7224 -7.4747 7.5047 18 6 4.0878 -7.6529 9.1348 19 7 3.3870 -8.4184 9.9262 20 7 4.1349 -8.8616 10.8738 21 6 5.3446 -8.3913 10.7352 22 7 5.3492 -7.6109 9.6276 23 6 4.6933 -6.9026 6.8498 24 6 4.1824 -6.1814 5.6003 25 6 2.9105 -0.6252 3.4159 26 9 3.4147 0.0903 4.4450 27 6 2.4527 0.0199 2.2818 28 1 -0.3933 0.4418 -0.7650 29 1 1.7923 -0.5139 -0.8900 30 1 1.5616 2.4678 1.2085 31 1 3.5346 1.7702 -0.0321 32 1 2.2769 -3.8286 2.4816 33 1 2.9207 -4.5715 4.0324 34 1 1.8050 -5.3243 6.6220 35 1 2.3788 -3.7746 7.2832 36 1 2.3894 -5.5424 9.0220 37 1 4.0419 -4.9813 8.6705 38 1 6.1859 -8.5878 11.3832 39 1 6.1025 -7.1212 9.2620 40 1 5.5564 -6.3703 7.2494 41 1 4.9835 -7.9204 6.5890 42 1 4.9716 -6.1530 4.8490 43 1 3.3191 -6.7133 5.2005 44 1 2.4993 1.0972 2.2187 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16624780_12360598.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:33:29 Heat of formation + Delta-G solvation = -53.043188 kcal Electronic energy + Delta-G solvation = -32283.284703 eV Core-core repulsion = 27453.390423 eV Total energy + Delta-G solvation = -4829.894280 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 365.134 amu Computer time = 1.22 seconds Orbital eigenvalues (eV) -50.28455 -50.17672 -44.16377 -41.60730 -40.26089 -39.23719 -37.63093 -35.92505 -34.65782 -33.76392 -32.24784 -31.90316 -31.52943 -29.75192 -27.77779 -25.01214 -24.53761 -24.01551 -23.78628 -23.13761 -22.19592 -21.78602 -21.09447 -19.61387 -19.31592 -18.82573 -18.60947 -18.53715 -17.52911 -17.26321 -17.25410 -16.89972 -16.60622 -16.40470 -16.28761 -16.18406 -15.89897 -15.74705 -15.40932 -15.36818 -15.18309 -14.96174 -14.57048 -14.13933 -13.97499 -13.89331 -13.74260 -13.63062 -13.32251 -13.16027 -12.86358 -12.53174 -12.37414 -12.32038 -12.23054 -12.12696 -11.85218 -11.69702 -11.51958 -11.37201 -11.22818 -10.74489 -10.43883 -10.29481 -10.23368 -9.94749 -5.02132 -0.93504 -0.46542 0.84202 1.15480 1.27002 1.60115 1.75089 1.83376 1.87856 1.89116 2.12472 2.63121 2.72143 2.94375 3.13199 3.19348 3.37592 3.54741 3.58386 3.59969 3.73253 3.85295 3.95832 4.00434 4.08273 4.17707 4.20339 4.24203 4.26550 4.29540 4.37663 4.41139 4.41949 4.49095 4.53165 4.59561 4.64716 4.77195 4.95963 4.99377 5.01383 5.05953 5.13543 5.20845 5.23258 5.24436 5.38120 6.23266 6.26529 6.79971 6.93649 7.69347 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.558 6.558 2 C -0.086 4.086 3 Si 0.780 3.220 4 C -0.063 4.063 5 C 0.108 3.892 6 F -0.119 7.119 7 C -0.071 4.071 8 C -0.147 4.147 9 C 0.561 3.439 10 O -0.559 6.559 11 N -0.700 5.700 12 C 0.145 3.855 13 H 0.077 0.923 14 C -0.124 4.124 15 C -0.101 4.101 16 C 0.003 3.997 17 H 0.110 0.890 18 C 0.192 3.808 19 N -0.344 5.344 20 N -0.355 5.355 21 C 0.169 3.831 22 N -0.568 5.568 23 C -0.108 4.108 24 C -0.116 4.116 25 C 0.136 3.864 26 F -0.126 7.126 27 C -0.148 4.148 28 H 0.409 0.591 29 H 0.105 0.895 30 H -0.288 1.288 31 H -0.283 1.283 32 H 0.192 0.808 33 H 0.417 0.583 34 H 0.084 0.916 35 H 0.049 0.951 36 H 0.061 0.939 37 H 0.065 0.935 38 H 0.262 0.738 39 H 0.446 0.554 40 H 0.077 0.923 41 H 0.086 0.914 42 H 0.091 0.909 43 H 0.093 0.907 44 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.268 0.039 -10.037 10.556 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.369 6.369 2 C -0.195 4.195 3 Si 0.684 3.316 4 C -0.065 4.065 5 C 0.088 3.912 6 F -0.098 7.098 7 C -0.090 4.090 8 C -0.151 4.151 9 C 0.347 3.653 10 O -0.438 6.438 11 N -0.353 5.353 12 C 0.041 3.959 13 H 0.095 0.905 14 C -0.162 4.162 15 C -0.140 4.140 16 C -0.018 4.018 17 H 0.128 0.872 18 C -0.079 4.079 19 N -0.184 5.184 20 N -0.194 5.194 21 C -0.121 4.121 22 N -0.182 5.182 23 C -0.147 4.147 24 C -0.154 4.154 25 C 0.115 3.885 26 F -0.104 7.104 27 C -0.167 4.167 28 H 0.262 0.738 29 H 0.123 0.877 30 H -0.216 1.216 31 H -0.209 1.209 32 H 0.209 0.791 33 H 0.256 0.744 34 H 0.102 0.898 35 H 0.068 0.932 36 H 0.079 0.921 37 H 0.084 0.916 38 H 0.277 0.723 39 H 0.289 0.711 40 H 0.096 0.904 41 H 0.105 0.895 42 H 0.110 0.890 43 H 0.112 0.888 44 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges 2.864 -0.133 -7.758 8.271 hybrid contribution 1.260 0.497 -0.187 1.367 sum 4.123 0.364 -7.945 8.959 Atomic orbital electron populations 1.86442 1.16111 1.82634 1.51733 1.24821 0.86905 1.11796 0.96012 0.93897 0.77873 0.74841 0.84966 1.19751 0.97964 0.92676 0.96070 1.17276 0.98908 0.88610 0.86393 1.91578 1.84320 1.77854 1.56007 1.21457 0.95250 1.02724 0.89580 1.19873 1.06300 0.91788 0.97136 1.17934 0.78443 0.83305 0.85609 1.90869 1.46464 1.66886 1.39604 1.45804 1.63263 1.04972 1.21220 1.21132 0.96640 0.93747 0.84395 0.90504 1.21855 0.99003 1.00383 0.94998 1.21444 1.01516 0.93371 0.97672 1.19834 1.00178 0.94370 0.87412 0.87206 1.25202 0.82695 1.00160 0.99892 1.74182 1.27460 1.13582 1.03197 1.74193 1.02294 1.23536 1.19373 1.27300 1.00084 0.93649 0.91102 1.44074 1.12465 1.39140 1.22567 1.21579 0.96847 1.02259 0.94004 1.21760 1.03447 0.92104 0.98091 1.17780 0.96509 0.88960 0.85244 1.91591 1.84153 1.77747 1.56885 1.20932 1.02230 1.01256 0.92261 0.73814 0.87738 1.21590 1.20920 0.79098 0.74394 0.89783 0.93168 0.92068 0.91584 0.72276 0.71056 0.90446 0.89512 0.89002 0.88845 0.83343 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 1.68 12.86 -148.98 -1.92 -0.23 16 2 C -0.09 0.30 2.43 71.24 0.17 0.48 16 3 Si 0.78 -3.73 30.19 68.60 2.07 -1.66 16 4 C -0.06 -0.08 5.30 -19.78 -0.10 -0.19 16 5 C 0.11 -0.05 7.23 22.33 0.16 0.11 16 6 F -0.12 0.01 16.73 44.97 0.75 0.76 16 7 C -0.07 0.26 9.52 22.57 0.21 0.48 16 8 C -0.15 -0.35 5.88 -20.06 -0.12 -0.46 16 9 C 0.56 2.19 7.73 86.74 0.67 2.86 16 10 O -0.56 -7.32 15.00 -3.92 -0.06 -7.38 16 11 N -0.70 3.32 5.03 -445.54 -2.24 1.08 16 12 C 0.14 -0.74 2.45 44.99 0.11 -0.63 16 13 H 0.08 -0.07 7.58 -2.39 -0.02 -0.09 16 14 C -0.12 0.35 5.49 30.60 0.17 0.52 16 15 C -0.10 0.26 5.19 30.59 0.16 0.42 16 16 C 0.00 -0.01 2.66 -11.54 -0.03 -0.04 16 17 H 0.11 -0.45 8.14 -2.39 -0.02 -0.47 16 18 C 0.19 0.29 6.99 137.98 0.96 1.26 16 19 N -0.34 -3.82 12.21 -50.15 -0.61 -4.44 16 20 N -0.36 -3.76 12.21 -59.99 -0.73 -4.49 16 21 C 0.17 -0.10 13.19 180.11 2.38 2.27 16 22 N -0.57 2.44 5.96 -189.86 -1.13 1.31 16 23 C -0.11 1.09 4.98 30.61 0.15 1.24 16 24 C -0.12 1.29 5.39 30.61 0.17 1.45 16 25 C 0.14 0.93 7.28 22.66 0.17 1.09 16 26 F -0.13 -1.57 15.55 44.97 0.70 -0.87 16 27 C -0.15 -0.60 8.62 22.28 0.19 -0.41 16 28 H 0.41 -5.55 8.74 -74.06 -0.65 -6.20 16 29 H 0.10 -0.78 7.89 -2.39 -0.02 -0.80 16 30 H -0.29 -0.66 6.74 99.48 0.67 0.01 16 31 H -0.28 -0.20 7.11 99.48 0.71 0.50 16 32 H 0.19 -2.34 6.40 -2.91 -0.02 -2.36 16 33 H 0.42 -4.89 6.63 -92.71 -0.62 -5.51 16 34 H 0.08 -0.42 8.14 -2.39 -0.02 -0.44 16 35 H 0.05 0.15 8.14 -2.39 -0.02 0.13 16 36 H 0.06 0.07 8.14 -2.39 -0.02 0.05 16 37 H 0.07 -0.16 8.14 -2.39 -0.02 -0.18 16 38 H 0.26 -2.75 8.06 -2.91 -0.02 -2.77 16 39 H 0.45 -5.38 8.29 -92.71 -0.77 -6.15 16 40 H 0.08 -0.92 7.52 -2.39 -0.02 -0.93 16 41 H 0.09 -0.92 8.14 -2.38 -0.02 -0.94 16 42 H 0.09 -1.16 8.14 -2.39 -0.02 -1.17 16 43 H 0.09 -1.25 8.14 -2.39 -0.02 -1.27 16 44 H 0.15 0.53 4.87 -2.91 -0.01 0.51 16 Total: 0.00 -34.89 371.03 1.33 -33.56 By element: Atomic # 1 Polarization: -27.15 SS G_CDS: -0.92 Total: -28.07 kcal Atomic # 6 Polarization: 5.02 SS G_CDS: 5.42 Total: 10.44 kcal Atomic # 7 Polarization: -1.83 SS G_CDS: -4.72 Total: -6.54 kcal Atomic # 8 Polarization: -5.64 SS G_CDS: -1.97 Total: -7.61 kcal Atomic # 9 Polarization: -1.56 SS G_CDS: 1.45 Total: -0.11 kcal Atomic # 14 Polarization: -3.73 SS G_CDS: 2.07 Total: -1.66 kcal Total: -34.89 1.33 -33.56 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16624780_12360598.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -19.485 kcal (2) G-P(sol) polarization free energy of solvation -34.887 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -54.372 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.329 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.558 kcal (6) G-S(sol) free energy of system = (1) + (5) -53.043 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.22 seconds