Wall clock time and date at job start Sun Mar 7 2021 05:33:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42906 * 1 3 3 C 1.35646 * 116.99788 * 2 1 4 4 C 1.40140 * 120.14689 * 179.97438 * 3 2 1 5 5 C 1.47537 * 120.19276 * 359.97438 * 4 3 2 6 6 O 1.21593 * 119.99856 * 0.02562 * 5 4 3 7 7 N 1.34777 * 120.00133 * 179.72978 * 5 4 3 8 8 C 1.46504 * 119.99854 * 180.27865 * 7 5 4 9 9 H 1.08993 * 109.47334 * 34.99803 * 8 7 5 10 10 C 1.53001 * 109.47114 * 154.99905 * 8 7 5 11 11 C 1.53000 * 109.47146 * 179.97438 * 10 8 7 12 12 C 1.52997 * 109.46977 * 299.99756 * 11 10 8 13 13 H 1.09001 * 109.46979 * 300.00130 * 12 11 10 14 14 C 1.50694 * 109.47138 * 180.02562 * 12 11 10 15 15 N 1.30523 * 126.34966 * 94.68977 * 14 12 11 16 16 N 1.28593 * 109.67419 * 179.82212 * 15 14 12 17 17 C 1.30522 * 109.67288 * 0.44770 * 16 15 14 18 18 N 1.35494 * 107.30743 * 359.73042 * 17 16 15 19 19 C 1.52999 * 109.47284 * 59.99687 * 12 11 10 20 20 C 1.52995 * 109.47507 * 300.00577 * 19 12 11 21 21 C 1.39717 * 119.61689 * 180.27424 * 4 3 2 22 22 C 1.37785 * 119.90690 * 359.48386 * 21 4 3 23 23 C 1.50702 * 119.84791 * 180.25303 * 22 21 4 24 24 O 1.42899 * 109.46598 * 65.26246 * 23 22 21 25 25 Si 1.86303 * 109.46700 * 185.25976 * 23 22 21 26 26 C 1.38551 * 120.30189 * 0.51745 * 22 21 4 27 27 C 1.38055 * 120.38488 * 359.73989 * 26 22 21 28 28 H 1.09010 * 109.46850 * 60.00320 * 1 2 3 29 29 H 1.08993 * 109.47367 * 180.02562 * 1 2 3 30 30 H 1.09003 * 109.47204 * 300.00655 * 1 2 3 31 31 H 0.97000 * 119.99736 * 0.27139 * 7 5 4 32 32 H 1.09003 * 109.46814 * 300.00188 * 10 8 7 33 33 H 1.09001 * 109.47274 * 59.99509 * 10 8 7 34 34 H 1.08994 * 109.46751 * 59.99776 * 11 10 8 35 35 H 1.09002 * 109.46769 * 180.02562 * 11 10 8 36 36 H 1.07998 * 126.34733 * 179.72650 * 17 16 15 37 37 H 0.96994 * 126.97925 * 180.02562 * 18 17 16 38 38 H 1.09001 * 109.46751 * 60.00303 * 19 12 11 39 39 H 1.09000 * 109.47556 * 179.97438 * 19 12 11 40 40 H 1.09001 * 109.46891 * 299.99640 * 20 19 12 41 41 H 1.09000 * 109.47220 * 180.02562 * 20 19 12 42 42 H 1.07997 * 120.04332 * 179.72615 * 21 4 3 43 43 H 1.08993 * 109.47587 * 305.26078 * 23 22 21 44 44 H 0.96702 * 114.00238 * 60.00343 * 24 23 22 45 45 H 1.48497 * 109.99937 * 58.68559 * 25 23 22 46 46 H 1.48500 * 109.99552 * 180.02562 * 25 23 22 47 47 H 1.07993 * 119.80527 * 179.71579 * 26 22 21 48 48 H 1.08003 * 119.95575 * 179.97438 * 27 26 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0448 1.2086 0.0000 4 6 3.4441 1.2856 0.0005 5 6 4.2550 0.0531 0.0017 6 8 3.7094 -1.0336 0.0017 7 7 5.6005 0.1316 -0.0033 8 6 6.4056 -1.0923 -0.0083 9 1 5.8998 -1.8576 -0.5970 10 6 7.7758 -0.7989 -0.6227 11 6 8.6169 -2.0770 -0.6274 12 6 8.7976 -2.5738 0.8083 13 1 9.3033 -1.8082 1.3968 14 6 9.6266 -3.8322 0.8038 15 7 10.9181 -3.9085 0.9760 16 7 11.2913 -5.1376 0.9148 17 6 10.2560 -5.9004 0.6913 18 7 9.1700 -5.0939 0.6145 19 6 7.4275 -2.8671 1.4228 20 6 6.5864 -1.5891 1.4274 21 6 4.0668 2.5363 0.0063 22 6 3.3039 3.6836 0.0007 23 6 3.9770 5.0320 0.0012 24 8 4.6996 5.2039 -1.2195 25 14 2.6886 6.3690 0.1539 26 6 1.9207 3.6034 0.0002 27 6 1.2926 2.3740 -0.0002 28 1 -0.3633 0.5138 -0.8901 29 1 -0.3634 -1.0276 0.0005 30 1 -0.3634 0.5139 0.8899 31 1 6.0357 0.9985 -0.0037 32 1 7.6470 -0.4445 -1.6454 33 1 8.2816 -0.0336 -0.0340 34 1 8.1112 -2.8425 -1.2158 35 1 9.5932 -1.8678 -1.0647 36 1 10.2637 -6.9753 0.5868 37 1 8.2522 -5.3647 0.4564 38 1 6.9218 -3.6327 0.8344 39 1 7.5562 -3.2215 2.4455 40 1 7.0920 -0.8235 2.0158 41 1 5.6104 -1.7980 1.8656 42 1 5.1447 2.6037 0.0113 43 1 4.6662 5.0938 0.8433 44 1 4.1480 5.1607 -2.0126 45 1 1.9089 6.1827 1.4039 46 1 3.3396 7.7037 0.1550 47 1 1.3305 4.5078 0.0004 48 1 0.2139 2.3195 -0.0003 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16624780_12496546.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:33:35 Heat of formation + Delta-G solvation = -1.761307 kcal Electronic energy + Delta-G solvation = -31927.238189 eV Core-core repulsion = 27564.255798 eV Total energy + Delta-G solvation = -4362.982391 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 359.168 amu Computer time = 1.23 seconds Orbital eigenvalues (eV) -44.08806 -41.82457 -40.62014 -39.26054 -39.06013 -37.20263 -35.65299 -34.54317 -33.15419 -32.06081 -32.01872 -31.80162 -29.55204 -28.59317 -26.25683 -25.59510 -24.47877 -24.05394 -23.36718 -22.61158 -22.02555 -21.41988 -20.95791 -19.53869 -19.33438 -18.45090 -18.10204 -17.54645 -16.90125 -16.82840 -16.79076 -16.35986 -16.33219 -16.12714 -15.94347 -15.88488 -15.65984 -15.21599 -15.05608 -14.77672 -14.62045 -14.44543 -14.10566 -13.85145 -13.75022 -13.47935 -13.38126 -13.22178 -12.77900 -12.50740 -12.43337 -12.37415 -12.28306 -12.21764 -12.12417 -11.88453 -11.78957 -11.76834 -11.53790 -11.26513 -10.85384 -10.46705 -10.28441 -10.14716 -10.02169 -9.33270 -5.14205 -0.30054 0.14398 0.84916 1.18738 1.53358 1.80327 1.82626 1.88967 1.95931 2.07985 2.16828 2.68535 3.11483 3.33188 3.39478 3.47228 3.53144 3.57425 3.61107 3.74781 3.82443 3.90803 3.98398 4.02141 4.07972 4.14662 4.14889 4.20378 4.23652 4.26382 4.29332 4.38156 4.42481 4.50427 4.51819 4.55132 4.60412 4.67460 4.82608 4.86522 4.89627 4.94502 4.95337 5.01519 5.12137 5.16759 5.18584 5.20999 5.43983 5.49261 6.07055 6.23267 6.46929 6.51744 7.30204 7.79366 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.019 3.981 2 O -0.279 6.279 3 C 0.193 3.807 4 C -0.176 4.176 5 C 0.563 3.437 6 O -0.516 6.516 7 N -0.728 5.728 8 C 0.146 3.854 9 H 0.090 0.910 10 C -0.126 4.126 11 C -0.106 4.106 12 C -0.004 4.004 13 H 0.110 0.890 14 C 0.187 3.813 15 N -0.291 5.291 16 N -0.296 5.296 17 C 0.153 3.847 18 N -0.581 5.581 19 C -0.114 4.114 20 C -0.128 4.128 21 C -0.019 4.019 22 C -0.169 4.169 23 C -0.062 4.062 24 O -0.540 6.540 25 Si 0.683 3.317 26 C -0.046 4.046 27 C -0.214 4.214 28 H 0.059 0.941 29 H 0.105 0.895 30 H 0.058 0.942 31 H 0.399 0.601 32 H 0.077 0.923 33 H 0.075 0.925 34 H 0.067 0.933 35 H 0.080 0.920 36 H 0.222 0.778 37 H 0.429 0.571 38 H 0.064 0.936 39 H 0.074 0.926 40 H 0.071 0.929 41 H 0.075 0.925 42 H 0.135 0.865 43 H 0.114 0.886 44 H 0.380 0.620 45 H -0.257 1.257 46 H -0.253 1.253 47 H 0.134 0.866 48 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.080 2.088 -2.478 7.787 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.190 6.190 3 C 0.144 3.856 4 C -0.179 4.179 5 C 0.351 3.649 6 O -0.392 6.392 7 N -0.380 5.380 8 C 0.042 3.958 9 H 0.108 0.892 10 C -0.164 4.164 11 C -0.145 4.145 12 C -0.024 4.024 13 H 0.128 0.872 14 C -0.082 4.082 15 N -0.132 5.132 16 N -0.135 5.135 17 C -0.136 4.136 18 N -0.194 5.194 19 C -0.153 4.153 20 C -0.166 4.166 21 C -0.038 4.038 22 C -0.169 4.169 23 C -0.173 4.173 24 O -0.345 6.345 25 Si 0.585 3.415 26 C -0.063 4.063 27 C -0.233 4.233 28 H 0.078 0.922 29 H 0.123 0.877 30 H 0.077 0.923 31 H 0.234 0.766 32 H 0.096 0.904 33 H 0.094 0.906 34 H 0.085 0.915 35 H 0.098 0.902 36 H 0.239 0.761 37 H 0.269 0.731 38 H 0.083 0.917 39 H 0.092 0.908 40 H 0.089 0.911 41 H 0.094 0.906 42 H 0.153 0.847 43 H 0.132 0.868 44 H 0.227 0.773 45 H -0.182 1.182 46 H -0.178 1.178 47 H 0.151 0.849 48 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -5.584 2.249 -1.314 6.162 hybrid contribution -1.490 -0.563 0.043 1.594 sum -7.075 1.686 -1.271 7.383 Atomic orbital electron populations 1.23238 0.78184 1.04746 1.01475 1.86377 1.21194 1.25197 1.86192 1.19089 0.90951 0.85055 0.90532 1.19343 0.90890 0.93921 1.13786 1.17944 0.81864 0.88650 0.76486 1.90839 1.71512 1.28569 1.48251 1.45962 1.05869 1.09694 1.76504 1.20996 0.90991 0.87209 0.96594 0.89155 1.21813 0.94222 0.98243 1.02136 1.21525 1.01072 0.97215 0.94704 1.19790 0.93589 0.90380 0.98689 0.87194 1.24870 0.92921 0.87267 1.03170 1.74303 1.07965 1.12290 1.18639 1.74303 1.24984 0.96843 1.17412 1.26581 0.82658 1.00144 1.04190 1.44138 1.12443 1.07551 1.55245 1.21595 0.93690 0.98454 1.01556 1.21899 1.00766 0.97003 0.96959 1.20977 0.99882 0.89865 0.93088 1.20128 0.93548 0.96071 1.07191 1.24955 1.03112 0.98954 0.90262 1.86508 1.37905 1.95096 1.15037 0.94854 0.81170 0.77766 0.87715 1.20979 0.93623 0.97259 0.94484 1.21239 1.00769 0.91577 1.09694 0.92231 0.87688 0.92343 0.76584 0.90393 0.90606 0.91455 0.90151 0.76124 0.73119 0.91683 0.90770 0.91060 0.90627 0.84706 0.86823 0.77288 1.18193 1.17790 0.84869 0.84121 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.03 9.81 101.05 0.99 0.96 16 2 O -0.28 -0.76 8.57 -40.52 -0.35 -1.11 16 3 C 0.19 0.30 6.70 -38.69 -0.26 0.04 16 4 C -0.18 -0.24 5.89 -104.84 -0.62 -0.86 16 5 C 0.56 1.42 7.73 -12.47 -0.10 1.32 16 6 O -0.52 -3.14 14.82 -16.59 -0.25 -3.39 16 7 N -0.73 0.51 5.03 -54.85 -0.28 0.23 16 8 C 0.15 -0.18 2.46 -67.93 -0.17 -0.35 16 9 H 0.09 0.04 7.58 -51.93 -0.39 -0.35 16 10 C -0.13 0.35 5.39 -26.73 -0.14 0.21 16 11 C -0.11 0.23 5.19 -26.73 -0.14 0.09 16 12 C 0.00 0.01 2.66 -91.78 -0.24 -0.24 16 13 H 0.11 -0.13 8.14 -51.93 -0.42 -0.55 16 14 C 0.19 0.21 6.99 -154.98 -1.08 -0.87 16 15 N -0.29 -1.51 12.21 32.80 0.40 -1.11 16 16 N -0.30 -1.49 12.21 29.69 0.36 -1.13 16 17 C 0.15 0.05 13.19 -89.94 -1.19 -1.14 16 18 N -0.58 0.71 5.96 -11.36 -0.07 0.64 16 19 C -0.11 0.25 4.97 -26.73 -0.13 0.12 16 20 C -0.13 0.17 5.49 -26.74 -0.15 0.03 16 21 C -0.02 0.02 9.16 -39.20 -0.36 -0.34 16 22 C -0.17 0.24 5.34 -104.67 -0.56 -0.32 16 23 C -0.06 0.12 2.79 36.01 0.10 0.22 16 24 O -0.54 0.81 12.83 -35.23 -0.45 0.36 16 25 Si 0.68 -1.60 29.78 -169.99 -5.06 -6.66 16 26 C -0.05 0.09 8.65 -39.53 -0.34 -0.26 16 27 C -0.21 0.21 9.03 -39.48 -0.36 -0.15 16 28 H 0.06 -0.18 7.66 -51.92 -0.40 -0.58 16 29 H 0.10 -0.25 8.14 -51.93 -0.42 -0.67 16 30 H 0.06 -0.16 7.66 -51.93 -0.40 -0.56 16 31 H 0.40 -1.16 6.63 -40.82 -0.27 -1.43 16 32 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 33 H 0.08 -0.26 8.14 -51.93 -0.42 -0.69 16 34 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 35 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 36 H 0.22 -0.90 8.06 -52.49 -0.42 -1.32 16 37 H 0.43 -1.94 8.29 -40.82 -0.34 -2.28 16 38 H 0.06 -0.19 7.52 -51.93 -0.39 -0.58 16 39 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 40 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 41 H 0.08 0.05 8.14 -51.93 -0.42 -0.37 16 42 H 0.14 -0.36 6.40 -52.49 -0.34 -0.69 16 43 H 0.11 -0.19 7.96 -51.93 -0.41 -0.60 16 44 H 0.38 -1.94 8.70 45.56 0.40 -1.55 16 45 H -0.26 -0.01 7.11 56.52 0.40 0.39 16 46 H -0.25 -0.30 7.11 56.52 0.40 0.10 16 47 H 0.13 -0.55 4.88 -52.49 -0.26 -0.81 16 48 H 0.14 -0.44 6.30 -52.48 -0.33 -0.78 16 LS Contribution 387.99 15.07 5.85 5.85 Total: 0.00 -12.88 387.99 -11.14 -24.02 By element: Atomic # 1 Polarization: -9.62 SS G_CDS: -6.55 Total: -16.17 kcal Atomic # 6 Polarization: 3.21 SS G_CDS: -4.74 Total: -1.53 kcal Atomic # 7 Polarization: -1.78 SS G_CDS: 0.42 Total: -1.36 kcal Atomic # 8 Polarization: -3.09 SS G_CDS: -1.05 Total: -4.14 kcal Atomic # 14 Polarization: -1.60 SS G_CDS: -5.06 Total: -6.66 kcal Total LS contribution 5.85 Total: 5.85 kcal Total: -12.88 -11.14 -24.02 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16624780_12496546.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 22.255 kcal (2) G-P(sol) polarization free energy of solvation -12.881 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 9.374 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.135 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.016 kcal (6) G-S(sol) free energy of system = (1) + (5) -1.761 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.23 seconds