Wall clock time and date at job start Sun Mar 7 2021 05:33:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42906 * 1 3 3 C 1.35646 * 116.99788 * 2 1 4 4 C 1.40140 * 120.14689 * 179.97438 * 3 2 1 5 5 C 1.47537 * 120.19276 * 359.97438 * 4 3 2 6 6 O 1.21593 * 119.99856 * 0.02562 * 5 4 3 7 7 N 1.34777 * 120.00133 * 179.72978 * 5 4 3 8 8 C 1.46504 * 119.99854 * 180.27865 * 7 5 4 9 9 H 1.08993 * 109.47334 * 34.99803 * 8 7 5 10 10 C 1.53001 * 109.47114 * 154.99905 * 8 7 5 11 11 C 1.53000 * 109.47146 * 179.97438 * 10 8 7 12 12 C 1.52997 * 109.46977 * 299.99756 * 11 10 8 13 13 H 1.09001 * 109.46979 * 300.00130 * 12 11 10 14 14 C 1.50694 * 109.47138 * 180.02562 * 12 11 10 15 15 N 1.30523 * 126.34966 * 94.68977 * 14 12 11 16 16 N 1.28593 * 109.67419 * 179.82212 * 15 14 12 17 17 C 1.30522 * 109.67288 * 0.44770 * 16 15 14 18 18 N 1.35494 * 107.30743 * 359.73042 * 17 16 15 19 19 C 1.52999 * 109.47284 * 59.99687 * 12 11 10 20 20 C 1.52995 * 109.47507 * 300.00577 * 19 12 11 21 21 C 1.39717 * 119.61689 * 180.27424 * 4 3 2 22 22 C 1.37785 * 119.90690 * 359.48386 * 21 4 3 23 23 C 1.50702 * 119.84791 * 180.25303 * 22 21 4 24 24 O 1.42899 * 109.46598 * 65.26246 * 23 22 21 25 25 Si 1.86303 * 109.46700 * 185.25976 * 23 22 21 26 26 C 1.38551 * 120.30189 * 0.51745 * 22 21 4 27 27 C 1.38055 * 120.38488 * 359.73989 * 26 22 21 28 28 H 1.09010 * 109.46850 * 60.00320 * 1 2 3 29 29 H 1.08993 * 109.47367 * 180.02562 * 1 2 3 30 30 H 1.09003 * 109.47204 * 300.00655 * 1 2 3 31 31 H 0.97000 * 119.99736 * 0.27139 * 7 5 4 32 32 H 1.09003 * 109.46814 * 300.00188 * 10 8 7 33 33 H 1.09001 * 109.47274 * 59.99509 * 10 8 7 34 34 H 1.08994 * 109.46751 * 59.99776 * 11 10 8 35 35 H 1.09002 * 109.46769 * 180.02562 * 11 10 8 36 36 H 1.07998 * 126.34733 * 179.72650 * 17 16 15 37 37 H 0.96994 * 126.97925 * 180.02562 * 18 17 16 38 38 H 1.09001 * 109.46751 * 60.00303 * 19 12 11 39 39 H 1.09000 * 109.47556 * 179.97438 * 19 12 11 40 40 H 1.09001 * 109.46891 * 299.99640 * 20 19 12 41 41 H 1.09000 * 109.47220 * 180.02562 * 20 19 12 42 42 H 1.07997 * 120.04332 * 179.72615 * 21 4 3 43 43 H 1.08993 * 109.47587 * 305.26078 * 23 22 21 44 44 H 0.96702 * 114.00238 * 60.00343 * 24 23 22 45 45 H 1.48497 * 109.99937 * 58.68559 * 25 23 22 46 46 H 1.48500 * 109.99552 * 180.02562 * 25 23 22 47 47 H 1.07993 * 119.80527 * 179.71579 * 26 22 21 48 48 H 1.08003 * 119.95575 * 179.97438 * 27 26 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0448 1.2086 0.0000 4 6 3.4441 1.2856 0.0005 5 6 4.2550 0.0531 0.0017 6 8 3.7094 -1.0336 0.0017 7 7 5.6005 0.1316 -0.0033 8 6 6.4056 -1.0923 -0.0083 9 1 5.8998 -1.8576 -0.5970 10 6 7.7758 -0.7989 -0.6227 11 6 8.6169 -2.0770 -0.6274 12 6 8.7976 -2.5738 0.8083 13 1 9.3033 -1.8082 1.3968 14 6 9.6266 -3.8322 0.8038 15 7 10.9181 -3.9085 0.9760 16 7 11.2913 -5.1376 0.9148 17 6 10.2560 -5.9004 0.6913 18 7 9.1700 -5.0939 0.6145 19 6 7.4275 -2.8671 1.4228 20 6 6.5864 -1.5891 1.4274 21 6 4.0668 2.5363 0.0063 22 6 3.3039 3.6836 0.0007 23 6 3.9770 5.0320 0.0012 24 8 4.6996 5.2039 -1.2195 25 14 2.6886 6.3690 0.1539 26 6 1.9207 3.6034 0.0002 27 6 1.2926 2.3740 -0.0002 28 1 -0.3633 0.5138 -0.8901 29 1 -0.3634 -1.0276 0.0005 30 1 -0.3634 0.5139 0.8899 31 1 6.0357 0.9985 -0.0037 32 1 7.6470 -0.4445 -1.6454 33 1 8.2816 -0.0336 -0.0340 34 1 8.1112 -2.8425 -1.2158 35 1 9.5932 -1.8678 -1.0647 36 1 10.2637 -6.9753 0.5868 37 1 8.2522 -5.3647 0.4564 38 1 6.9218 -3.6327 0.8344 39 1 7.5562 -3.2215 2.4455 40 1 7.0920 -0.8235 2.0158 41 1 5.6104 -1.7980 1.8656 42 1 5.1447 2.6037 0.0113 43 1 4.6662 5.0938 0.8433 44 1 4.1480 5.1607 -2.0126 45 1 1.9089 6.1827 1.4039 46 1 3.3396 7.7037 0.1550 47 1 1.3305 4.5078 0.0004 48 1 0.2139 2.3195 -0.0003 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16624780_12496546.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:33:34 Heat of formation + Delta-G solvation = -3.852503 kcal Electronic energy + Delta-G solvation = -31927.328870 eV Core-core repulsion = 27564.255798 eV Total energy + Delta-G solvation = -4363.073072 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 359.168 amu Computer time = 1.31 seconds Orbital eigenvalues (eV) -44.15974 -41.80820 -40.59683 -39.19216 -39.07834 -37.08595 -35.71695 -34.59847 -33.13456 -32.02724 -31.89673 -31.74126 -29.56328 -28.46606 -26.13529 -25.58096 -24.45831 -23.96665 -23.34809 -22.57548 -21.99962 -21.44291 -20.88686 -19.47651 -19.31046 -18.35282 -18.08189 -17.47982 -16.86680 -16.85718 -16.78818 -16.38372 -16.28521 -16.03567 -15.86331 -15.81299 -15.60747 -15.13801 -14.97519 -14.70746 -14.52133 -14.45309 -14.05853 -13.76386 -13.64900 -13.38869 -13.28631 -13.09378 -12.84185 -12.45882 -12.37615 -12.28755 -12.21640 -12.12970 -12.01363 -11.84990 -11.79518 -11.67844 -11.52229 -11.31302 -10.94501 -10.37105 -10.28260 -10.24120 -10.00884 -9.28057 -4.97574 -0.25014 0.22729 0.84566 1.34703 1.66144 1.79594 1.83493 1.88095 2.00945 2.09704 2.27728 2.69907 3.15110 3.48376 3.52188 3.60711 3.65030 3.70218 3.77234 3.85196 3.96154 4.00867 4.11179 4.16507 4.20638 4.30424 4.31574 4.31967 4.36552 4.38729 4.41097 4.42414 4.49802 4.56927 4.64880 4.69368 4.74326 4.77889 4.92723 4.99022 5.00100 5.02895 5.06054 5.11915 5.15039 5.25380 5.28833 5.30288 5.50670 5.57675 6.22202 6.30989 6.53783 6.82448 7.23590 7.69311 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.011 3.989 2 O -0.312 6.312 3 C 0.171 3.829 4 C -0.197 4.197 5 C 0.558 3.442 6 O -0.561 6.561 7 N -0.715 5.715 8 C 0.148 3.852 9 H 0.073 0.927 10 C -0.116 4.116 11 C -0.101 4.101 12 C 0.003 3.997 13 H 0.108 0.892 14 C 0.192 3.808 15 N -0.342 5.342 16 N -0.354 5.354 17 C 0.169 3.831 18 N -0.569 5.569 19 C -0.106 4.106 20 C -0.121 4.121 21 C -0.017 4.017 22 C -0.168 4.168 23 C -0.063 4.063 24 O -0.554 6.554 25 Si 0.768 3.232 26 C -0.042 4.042 27 C -0.213 4.213 28 H 0.075 0.925 29 H 0.107 0.893 30 H 0.071 0.929 31 H 0.411 0.589 32 H 0.083 0.917 33 H 0.088 0.912 34 H 0.070 0.930 35 H 0.073 0.927 36 H 0.262 0.738 37 H 0.445 0.555 38 H 0.074 0.926 39 H 0.073 0.927 40 H 0.078 0.922 41 H 0.053 0.947 42 H 0.150 0.850 43 H 0.112 0.888 44 H 0.396 0.604 45 H -0.285 1.285 46 H -0.303 1.303 47 H 0.158 0.842 48 H 0.162 0.838 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.980 2.796 -2.987 8.967 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.083 4.083 2 O -0.224 6.224 3 C 0.122 3.878 4 C -0.201 4.201 5 C 0.347 3.653 6 O -0.441 6.441 7 N -0.367 5.367 8 C 0.044 3.956 9 H 0.091 0.909 10 C -0.154 4.154 11 C -0.140 4.140 12 C -0.018 4.018 13 H 0.126 0.874 14 C -0.079 4.079 15 N -0.182 5.182 16 N -0.193 5.193 17 C -0.121 4.121 18 N -0.184 5.184 19 C -0.145 4.145 20 C -0.160 4.160 21 C -0.036 4.036 22 C -0.169 4.169 23 C -0.173 4.173 24 O -0.362 6.362 25 Si 0.675 3.325 26 C -0.059 4.059 27 C -0.231 4.231 28 H 0.093 0.907 29 H 0.125 0.875 30 H 0.089 0.911 31 H 0.248 0.752 32 H 0.101 0.899 33 H 0.106 0.894 34 H 0.089 0.911 35 H 0.092 0.908 36 H 0.277 0.723 37 H 0.288 0.712 38 H 0.092 0.908 39 H 0.091 0.909 40 H 0.097 0.903 41 H 0.072 0.928 42 H 0.168 0.832 43 H 0.129 0.871 44 H 0.246 0.754 45 H -0.212 1.212 46 H -0.231 1.231 47 H 0.175 0.825 48 H 0.180 0.820 Dipole moment (debyes) X Y Z Total from point charges -6.474 2.959 -1.847 7.354 hybrid contribution -1.239 -0.746 0.205 1.460 sum -7.713 2.213 -1.642 8.190 Atomic orbital electron populations 1.23442 0.76591 1.05439 1.02821 1.86330 1.23118 1.26350 1.86567 1.19415 0.91376 0.85541 0.91458 1.19443 0.91168 0.94108 1.15397 1.18249 0.82668 0.88552 0.75839 1.90804 1.72459 1.30136 1.50677 1.45889 1.05094 1.10548 1.75188 1.20995 0.91457 0.86662 0.96519 0.90915 1.21740 0.92959 0.98218 1.02504 1.21468 1.00804 0.97602 0.94107 1.19811 0.93385 0.89398 0.99194 0.87401 1.25170 0.92256 0.88587 1.01859 1.74186 1.10076 1.13024 1.20922 1.74189 1.27410 0.97452 1.20206 1.27300 0.81893 1.01458 1.01471 1.44100 1.13149 1.06655 1.54462 1.21521 0.93068 0.98265 1.01623 1.21814 0.99774 0.97659 0.96766 1.21122 1.00727 0.89243 0.92492 1.20246 0.93874 0.96000 1.06792 1.25023 1.03202 0.98759 0.90345 1.86478 1.38865 1.95036 1.15793 0.93896 0.78996 0.74075 0.85536 1.21270 0.93664 0.97855 0.93144 1.21479 1.01785 0.90951 1.08931 0.90682 0.87471 0.91087 0.75175 0.89876 0.89353 0.91129 0.90807 0.72254 0.71164 0.90764 0.90868 0.90309 0.92779 0.83228 0.87052 0.75440 1.21207 1.23131 0.82481 0.82043 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.03 9.81 113.37 1.11 1.08 16 2 O -0.31 -2.14 8.57 -68.69 -0.59 -2.73 16 3 C 0.17 0.65 6.70 22.84 0.15 0.80 16 4 C -0.20 -0.69 5.89 -20.01 -0.12 -0.81 16 5 C 0.56 3.61 7.73 86.70 0.67 4.28 16 6 O -0.56 -8.16 14.82 16.91 0.25 -7.91 16 7 N -0.71 0.59 5.03 -445.70 -2.24 -1.65 16 8 C 0.15 -0.29 2.46 44.99 0.11 -0.18 16 9 H 0.07 0.16 7.58 -2.39 -0.02 0.14 16 10 C -0.12 0.69 5.39 30.59 0.16 0.86 16 11 C -0.10 0.43 5.19 30.59 0.16 0.59 16 12 C 0.00 -0.01 2.66 -11.54 -0.03 -0.04 16 13 H 0.11 -0.22 8.14 -2.39 -0.02 -0.24 16 14 C 0.19 0.52 6.99 137.97 0.96 1.49 16 15 N -0.34 -3.99 12.21 -50.16 -0.61 -4.61 16 16 N -0.35 -3.93 12.21 -59.99 -0.73 -4.66 16 17 C 0.17 0.04 13.19 180.11 2.37 2.41 16 18 N -0.57 1.62 5.96 -189.86 -1.13 0.49 16 19 C -0.11 0.45 4.97 30.59 0.15 0.61 16 20 C -0.12 0.26 5.49 30.59 0.17 0.42 16 21 C -0.02 0.03 9.16 22.52 0.21 0.24 16 22 C -0.17 0.65 5.34 -19.90 -0.11 0.55 16 23 C -0.06 0.31 2.79 71.24 0.20 0.51 16 24 O -0.55 2.37 12.83 -148.98 -1.91 0.46 16 25 Si 0.77 -4.29 29.78 68.60 2.04 -2.25 16 26 C -0.04 0.22 8.65 22.30 0.19 0.41 16 27 C -0.21 0.57 9.03 22.34 0.20 0.77 16 28 H 0.07 -0.48 7.66 -2.38 -0.02 -0.49 16 29 H 0.11 -0.42 8.14 -2.39 -0.02 -0.44 16 30 H 0.07 -0.41 7.66 -2.39 -0.02 -0.43 16 31 H 0.41 -2.48 6.63 -92.71 -0.61 -3.10 16 32 H 0.08 -0.52 8.14 -2.39 -0.02 -0.54 16 33 H 0.09 -0.71 8.14 -2.39 -0.02 -0.73 16 34 H 0.07 -0.33 8.14 -2.39 -0.02 -0.35 16 35 H 0.07 -0.17 8.14 -2.39 -0.02 -0.19 16 36 H 0.26 -2.55 8.06 -2.91 -0.02 -2.58 16 37 H 0.45 -4.45 8.29 -92.71 -0.77 -5.22 16 38 H 0.07 -0.44 7.52 -2.39 -0.02 -0.46 16 39 H 0.07 -0.26 8.14 -2.39 -0.02 -0.28 16 40 H 0.08 -0.28 8.14 -2.39 -0.02 -0.30 16 41 H 0.05 0.16 8.14 -2.39 -0.02 0.14 16 42 H 0.15 -0.91 6.40 -2.91 -0.02 -0.92 16 43 H 0.11 -0.48 7.96 -2.39 -0.02 -0.50 16 44 H 0.40 -4.68 8.70 -74.06 -0.64 -5.32 16 45 H -0.29 0.22 7.11 99.48 0.71 0.93 16 46 H -0.30 -0.88 7.11 99.48 0.71 -0.18 16 47 H 0.16 -1.66 4.88 -2.91 -0.01 -1.67 16 48 H 0.16 -1.25 6.30 -2.91 -0.02 -1.26 16 Total: 0.00 -33.53 387.99 0.70 -32.84 By element: Atomic # 1 Polarization: -23.03 SS G_CDS: -0.95 Total: -23.99 kcal Atomic # 6 Polarization: 7.42 SS G_CDS: 6.57 Total: 14.00 kcal Atomic # 7 Polarization: -5.70 SS G_CDS: -4.72 Total: -10.42 kcal Atomic # 8 Polarization: -7.93 SS G_CDS: -2.25 Total: -10.18 kcal Atomic # 14 Polarization: -4.29 SS G_CDS: 2.04 Total: -2.25 kcal Total: -33.53 0.70 -32.84 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16624780_12496546.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 28.985 kcal (2) G-P(sol) polarization free energy of solvation -33.533 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -4.548 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.696 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.838 kcal (6) G-S(sol) free energy of system = (1) + (5) -3.853 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.31 seconds