Wall clock time and date at job start Sun Mar 7 2021 05:33:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42907 * 1 3 3 Si 1.86298 * 109.47076 * 2 1 4 4 C 1.50697 * 109.46947 * 119.99654 * 2 1 3 5 5 C 1.37828 * 119.94009 * 14.97520 * 4 2 1 6 6 C 1.39668 * 119.87747 * 180.02562 * 5 4 2 7 7 C 1.47723 * 120.11595 * 180.02562 * 6 5 4 8 8 O 1.21568 * 120.00308 * 359.97438 * 7 6 5 9 9 N 1.34781 * 119.99851 * 180.02562 * 7 6 5 10 10 C 1.46498 * 119.99599 * 179.97438 * 9 7 6 11 11 H 1.09002 * 109.47789 * 35.00224 * 10 9 7 12 12 C 1.52999 * 109.46888 * 154.99875 * 10 9 7 13 13 C 1.53005 * 109.47285 * 179.97438 * 12 10 9 14 14 C 1.52996 * 109.47350 * 300.00353 * 13 12 10 15 15 H 1.09002 * 109.47024 * 300.00221 * 14 13 12 16 16 C 1.50700 * 109.47274 * 179.97438 * 14 13 12 17 17 N 1.30513 * 126.34741 * 95.02504 * 16 14 13 18 18 N 1.28598 * 109.67298 * 179.97438 * 17 16 14 19 19 C 1.30519 * 109.67389 * 359.97438 * 18 17 16 20 20 N 1.35496 * 107.30697 * 359.78198 * 19 18 17 21 21 C 1.52999 * 109.47215 * 59.99604 * 14 13 12 22 22 C 1.53005 * 109.47069 * 274.99852 * 10 9 7 23 23 C 1.39626 * 119.76461 * 0.02562 * 6 5 4 24 24 C 1.37856 * 119.88168 * 0.02562 * 23 6 5 25 25 C 1.38635 * 120.11820 * 359.97438 * 24 23 6 26 26 F 1.35097 * 119.87957 * 179.97438 * 25 24 23 27 27 H 0.96692 * 114.00086 * 300.00807 * 1 2 3 28 28 H 1.08990 * 109.47178 * 239.99388 * 2 1 3 29 29 H 1.48500 * 109.99892 * 299.99602 * 3 2 1 30 30 H 1.48495 * 110.00232 * 61.31425 * 3 2 1 31 31 H 1.07996 * 120.05908 * 0.04998 * 5 4 2 32 32 H 0.96995 * 119.99791 * 359.97438 * 9 7 6 33 33 H 1.08992 * 109.47351 * 299.99711 * 12 10 9 34 34 H 1.09000 * 109.47075 * 60.00248 * 12 10 9 35 35 H 1.09000 * 109.46508 * 60.00334 * 13 12 10 36 36 H 1.08996 * 109.47135 * 179.97438 * 13 12 10 37 37 H 1.07998 * 126.34403 * 179.97438 * 19 18 17 38 38 H 0.96993 * 126.98405 * 180.22281 * 20 19 18 39 39 H 1.09000 * 109.47075 * 59.99755 * 21 14 13 40 40 H 1.09005 * 109.47418 * 179.97438 * 21 14 13 41 41 H 1.08994 * 109.46974 * 299.99921 * 22 10 9 42 42 H 1.08992 * 109.47175 * 60.00385 * 22 10 9 43 43 H 1.08003 * 120.06117 * 180.02562 * 23 6 5 44 44 H 1.08004 * 119.93918 * 180.26677 * 24 23 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7103 1.2305 5 6 1.0728 -1.4941 1.9709 6 6 1.5396 -2.1514 3.1114 7 6 0.6241 -2.9933 3.9086 8 8 -0.5379 -3.1145 3.5726 9 7 1.0770 -3.6261 5.0091 10 6 0.1689 -4.4605 5.7999 11 1 -0.5401 -4.9558 5.1365 12 6 0.9767 -5.5138 6.5608 13 6 0.0285 -6.3849 7.3873 14 6 -0.7320 -5.5076 8.3836 15 1 -0.0227 -5.0123 9.0468 16 6 -1.6664 -6.3655 9.1972 17 7 -1.4187 -6.8818 10.3701 18 7 -2.4380 -7.5560 10.7703 19 6 -3.3825 -7.5000 9.8712 20 7 -2.9217 -6.7386 8.8495 21 6 -1.5398 -4.4543 7.6228 22 6 -0.5920 -3.5834 6.7963 23 6 2.8746 -2.0100 3.4954 24 6 3.7245 -1.2228 2.7482 25 6 3.2559 -0.5725 1.6170 26 9 4.0929 0.1982 0.8886 27 1 -0.3933 0.4418 0.7649 28 1 1.7924 -0.5139 -0.8898 29 1 1.5616 2.4678 -1.2085 30 1 1.5879 2.4586 1.2241 31 1 0.0412 -1.6001 1.6695 32 1 2.0040 -3.5291 5.2774 33 1 1.5187 -6.1386 5.8510 34 1 1.6857 -5.0186 7.2243 35 1 -0.6807 -6.8801 6.7240 36 1 0.6039 -7.1356 7.9289 37 1 -4.3527 -7.9705 9.9319 38 1 -3.3937 -6.5091 8.0338 39 1 -2.2490 -4.9495 6.9596 40 1 -2.0820 -3.8295 8.3327 41 1 0.1170 -3.0883 7.4598 42 1 -1.1674 -2.8331 6.2543 43 1 3.2407 -2.5165 4.3763 44 1 4.7583 -1.1162 3.0419 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16624780_12496548.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:33:39 Heat of formation + Delta-G solvation = -13.493900 kcal Electronic energy + Delta-G solvation = -29630.479690 eV Core-core repulsion = 25271.754371 eV Total energy + Delta-G solvation = -4358.725319 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 347.143 amu Computer time = 0.98 seconds Orbital eigenvalues (eV) -50.42200 -44.13958 -41.64004 -40.32588 -39.17536 -37.82899 -35.88601 -34.61834 -33.23234 -32.44801 -32.12080 -31.81439 -29.61966 -27.21137 -25.59102 -24.44753 -24.06615 -23.37558 -23.30449 -22.20042 -21.56291 -21.08135 -19.45979 -19.38395 -18.69555 -18.22814 -17.87529 -17.15996 -17.13202 -16.85467 -16.47979 -16.39890 -16.18095 -15.97005 -15.81362 -15.37068 -15.35576 -15.27761 -14.95777 -14.48870 -14.34600 -14.18512 -13.95611 -13.89585 -13.53148 -13.40527 -12.90649 -12.85075 -12.55770 -12.47493 -12.46266 -12.36426 -11.94712 -11.89155 -11.82913 -11.64370 -11.34417 -11.19548 -10.99802 -10.31740 -10.19852 -10.15180 -9.85381 -4.81715 -0.60774 -0.12266 0.79770 1.15414 1.53981 1.58691 1.74627 1.85649 1.91030 1.94040 2.49130 2.82110 3.03443 3.07446 3.22466 3.30652 3.42605 3.45832 3.53769 3.63828 3.76910 3.78267 3.89731 3.96811 3.99304 4.09379 4.12810 4.16534 4.31321 4.32152 4.40997 4.43017 4.47186 4.57568 4.64459 4.72067 4.76397 4.79607 4.84548 4.85304 4.90450 4.94312 5.03039 5.08099 5.10731 5.27776 5.46438 6.01961 6.24532 6.27297 7.01774 7.74424 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.527 6.527 2 C -0.074 4.074 3 Si 0.676 3.324 4 C -0.154 4.154 5 C -0.024 4.024 6 C -0.142 4.142 7 C 0.562 3.438 8 O -0.529 6.529 9 N -0.723 5.723 10 C 0.144 3.856 11 H 0.092 0.908 12 C -0.126 4.126 13 C -0.107 4.107 14 C -0.003 4.003 15 H 0.110 0.890 16 C 0.186 3.814 17 N -0.291 5.291 18 N -0.296 5.296 19 C 0.154 3.846 20 N -0.581 5.581 21 C -0.115 4.115 22 C -0.128 4.128 23 C -0.060 4.060 24 C -0.149 4.149 25 C 0.123 3.877 26 F -0.104 7.104 27 H 0.378 0.622 28 H 0.128 0.872 29 H -0.248 1.248 30 H -0.256 1.256 31 H 0.153 0.847 32 H 0.401 0.599 33 H 0.078 0.922 34 H 0.076 0.924 35 H 0.067 0.933 36 H 0.081 0.919 37 H 0.223 0.777 38 H 0.429 0.571 39 H 0.065 0.935 40 H 0.075 0.925 41 H 0.072 0.928 42 H 0.075 0.925 43 H 0.139 0.861 44 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.103 0.661 -1.273 3.418 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.333 6.333 2 C -0.183 4.183 3 Si 0.575 3.425 4 C -0.156 4.156 5 C -0.043 4.043 6 C -0.146 4.146 7 C 0.350 3.650 8 O -0.406 6.406 9 N -0.374 5.374 10 C 0.040 3.960 11 H 0.110 0.890 12 C -0.164 4.164 13 C -0.146 4.146 14 C -0.024 4.024 15 H 0.129 0.871 16 C -0.084 4.084 17 N -0.131 5.131 18 N -0.135 5.135 19 C -0.135 4.135 20 N -0.194 5.194 21 C -0.154 4.154 22 C -0.166 4.166 23 C -0.079 4.079 24 C -0.168 4.168 25 C 0.104 3.896 26 F -0.082 7.082 27 H 0.226 0.774 28 H 0.146 0.854 29 H -0.173 1.173 30 H -0.180 1.180 31 H 0.171 0.829 32 H 0.236 0.764 33 H 0.096 0.904 34 H 0.095 0.905 35 H 0.086 0.914 36 H 0.099 0.901 37 H 0.239 0.761 38 H 0.269 0.731 39 H 0.083 0.917 40 H 0.093 0.907 41 H 0.091 0.909 42 H 0.094 0.906 43 H 0.156 0.844 44 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges 2.954 0.705 -0.637 3.103 hybrid contribution -1.526 0.247 -0.972 1.826 sum 1.428 0.952 -1.609 2.353 Atomic orbital electron populations 1.86612 1.17049 1.80098 1.49524 1.24943 0.84556 1.11203 0.97577 0.94742 0.92761 0.73530 0.81462 1.20392 0.92950 1.02074 1.00156 1.20975 1.00924 0.91187 0.91196 1.19976 0.94309 1.02148 0.98141 1.18128 0.87341 0.79335 0.80217 1.90817 1.17682 1.62408 1.69726 1.45956 1.14353 1.49985 1.27125 1.21069 0.91951 0.90669 0.92352 0.89008 1.21813 0.98263 0.97154 0.99178 1.21527 0.98435 0.97710 0.96899 1.19782 0.94306 0.93191 0.95125 0.87149 1.24851 0.85919 1.01993 0.95600 1.74303 1.19887 1.10663 1.08274 1.74309 0.97731 1.17259 1.24212 1.26592 1.02610 0.98281 0.85995 1.44140 1.14469 1.40459 1.20324 1.21596 0.98027 0.97038 0.98707 1.21890 0.98736 0.98357 0.97641 1.21182 0.91857 0.96158 0.98714 1.21100 1.01885 0.99043 0.94734 1.17655 0.87266 0.93210 0.91509 1.91197 1.69780 1.71234 1.76020 0.77412 0.85445 1.17307 1.18000 0.82900 0.76360 0.90360 0.90512 0.91423 0.90066 0.76101 0.73121 0.91653 0.90663 0.90925 0.90613 0.84359 0.83237 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.49 11.64 -35.23 -0.41 -0.90 16 2 C -0.07 0.02 2.97 36.00 0.11 0.13 16 3 Si 0.68 -0.16 29.57 -169.99 -5.03 -5.19 16 4 C -0.15 0.07 5.13 -104.61 -0.54 -0.47 16 5 C -0.02 0.00 8.78 -39.20 -0.34 -0.35 16 6 C -0.14 0.11 5.87 -104.97 -0.62 -0.50 16 7 C 0.56 0.17 7.73 -12.38 -0.10 0.08 16 8 O -0.53 -2.14 16.01 5.31 0.08 -2.05 16 9 N -0.72 2.01 5.03 -54.79 -0.28 1.73 16 10 C 0.14 -0.40 2.45 -67.93 -0.17 -0.57 16 11 H 0.09 -0.09 7.58 -51.93 -0.39 -0.49 16 12 C -0.13 0.54 5.39 -26.73 -0.14 0.39 16 13 C -0.11 0.34 5.19 -26.73 -0.14 0.20 16 14 C 0.00 0.01 2.66 -91.77 -0.24 -0.24 16 15 H 0.11 -0.25 8.14 -51.93 -0.42 -0.67 16 16 C 0.19 0.07 6.99 -154.99 -1.08 -1.01 16 17 N -0.29 -1.31 12.21 32.80 0.40 -0.91 16 18 N -0.30 -1.32 12.21 29.69 0.36 -0.96 16 19 C 0.15 -0.04 13.19 -89.94 -1.19 -1.22 16 20 N -0.58 1.09 5.96 -11.36 -0.07 1.02 16 21 C -0.11 0.38 4.96 -26.75 -0.13 0.25 16 22 C -0.13 0.36 5.49 -26.75 -0.15 0.21 16 23 C -0.06 0.20 9.54 -39.20 -0.37 -0.18 16 24 C -0.15 0.44 10.01 -39.57 -0.40 0.05 16 25 C 0.12 -0.17 6.67 -39.28 -0.26 -0.43 16 26 F -0.10 0.18 13.70 2.25 0.03 0.21 16 27 H 0.38 -0.71 8.43 45.56 0.38 -0.33 16 28 H 0.13 -0.12 7.96 -51.93 -0.41 -0.54 16 29 H -0.25 -0.65 7.11 56.52 0.40 -0.25 16 30 H -0.26 -0.48 7.11 56.52 0.40 -0.08 16 31 H 0.15 0.16 6.66 -52.49 -0.35 -0.19 16 32 H 0.40 -2.18 6.63 -40.82 -0.27 -2.46 16 33 H 0.08 -0.34 8.14 -51.93 -0.42 -0.76 16 34 H 0.08 -0.39 8.14 -51.93 -0.42 -0.81 16 35 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 36 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 37 H 0.22 -1.00 8.06 -52.49 -0.42 -1.43 16 38 H 0.43 -2.21 8.27 -40.82 -0.34 -2.55 16 39 H 0.06 -0.26 7.51 -51.93 -0.39 -0.65 16 40 H 0.07 -0.21 8.14 -51.93 -0.42 -0.63 16 41 H 0.07 -0.24 8.14 -51.93 -0.42 -0.67 16 42 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 43 H 0.14 -0.89 6.40 -52.48 -0.34 -1.22 16 44 H 0.15 -0.77 8.06 -52.48 -0.42 -1.19 16 LS Contribution 364.25 15.07 5.49 5.49 Total: 0.00 -11.17 364.25 -10.70 -21.87 By element: Atomic # 1 Polarization: -11.11 SS G_CDS: -5.53 Total: -16.64 kcal Atomic # 6 Polarization: 2.09 SS G_CDS: -5.76 Total: -3.67 kcal Atomic # 7 Polarization: 0.46 SS G_CDS: 0.42 Total: 0.88 kcal Atomic # 8 Polarization: -2.62 SS G_CDS: -0.33 Total: -2.95 kcal Atomic # 9 Polarization: 0.18 SS G_CDS: 0.03 Total: 0.21 kcal Atomic # 14 Polarization: -0.16 SS G_CDS: -5.03 Total: -5.19 kcal Total LS contribution 5.49 Total: 5.49 kcal Total: -11.17 -10.70 -21.87 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16624780_12496548.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 8.377 kcal (2) G-P(sol) polarization free energy of solvation -11.167 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -2.790 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.704 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.871 kcal (6) G-S(sol) free energy of system = (1) + (5) -13.494 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.98 seconds