Wall clock time and date at job start Sun Mar 7 2021 05:33:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42907 * 1 3 3 Si 1.86298 * 109.47076 * 2 1 4 4 C 1.50697 * 109.46947 * 119.99654 * 2 1 3 5 5 C 1.37828 * 119.94009 * 14.97520 * 4 2 1 6 6 C 1.39668 * 119.87747 * 180.02562 * 5 4 2 7 7 C 1.47723 * 120.11595 * 180.02562 * 6 5 4 8 8 O 1.21568 * 120.00308 * 359.97438 * 7 6 5 9 9 N 1.34781 * 119.99851 * 180.02562 * 7 6 5 10 10 C 1.46498 * 119.99599 * 179.97438 * 9 7 6 11 11 H 1.09002 * 109.47789 * 35.00224 * 10 9 7 12 12 C 1.52999 * 109.46888 * 154.99875 * 10 9 7 13 13 C 1.53005 * 109.47285 * 179.97438 * 12 10 9 14 14 C 1.52996 * 109.47350 * 300.00353 * 13 12 10 15 15 H 1.09002 * 109.47024 * 300.00221 * 14 13 12 16 16 C 1.50700 * 109.47274 * 179.97438 * 14 13 12 17 17 N 1.30513 * 126.34741 * 95.02504 * 16 14 13 18 18 N 1.28598 * 109.67298 * 179.97438 * 17 16 14 19 19 C 1.30519 * 109.67389 * 359.97438 * 18 17 16 20 20 N 1.35496 * 107.30697 * 359.78198 * 19 18 17 21 21 C 1.52999 * 109.47215 * 59.99604 * 14 13 12 22 22 C 1.53005 * 109.47069 * 274.99852 * 10 9 7 23 23 C 1.39626 * 119.76461 * 0.02562 * 6 5 4 24 24 C 1.37856 * 119.88168 * 0.02562 * 23 6 5 25 25 C 1.38635 * 120.11820 * 359.97438 * 24 23 6 26 26 F 1.35097 * 119.87957 * 179.97438 * 25 24 23 27 27 H 0.96692 * 114.00086 * 300.00807 * 1 2 3 28 28 H 1.08990 * 109.47178 * 239.99388 * 2 1 3 29 29 H 1.48500 * 109.99892 * 299.99602 * 3 2 1 30 30 H 1.48495 * 110.00232 * 61.31425 * 3 2 1 31 31 H 1.07996 * 120.05908 * 0.04998 * 5 4 2 32 32 H 0.96995 * 119.99791 * 359.97438 * 9 7 6 33 33 H 1.08992 * 109.47351 * 299.99711 * 12 10 9 34 34 H 1.09000 * 109.47075 * 60.00248 * 12 10 9 35 35 H 1.09000 * 109.46508 * 60.00334 * 13 12 10 36 36 H 1.08996 * 109.47135 * 179.97438 * 13 12 10 37 37 H 1.07998 * 126.34403 * 179.97438 * 19 18 17 38 38 H 0.96993 * 126.98405 * 180.22281 * 20 19 18 39 39 H 1.09000 * 109.47075 * 59.99755 * 21 14 13 40 40 H 1.09005 * 109.47418 * 179.97438 * 21 14 13 41 41 H 1.08994 * 109.46974 * 299.99921 * 22 10 9 42 42 H 1.08992 * 109.47175 * 60.00385 * 22 10 9 43 43 H 1.08003 * 120.06117 * 180.02562 * 23 6 5 44 44 H 1.08004 * 119.93918 * 180.26677 * 24 23 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7103 1.2305 5 6 1.0728 -1.4941 1.9709 6 6 1.5396 -2.1514 3.1114 7 6 0.6241 -2.9933 3.9086 8 8 -0.5379 -3.1145 3.5726 9 7 1.0770 -3.6261 5.0091 10 6 0.1689 -4.4605 5.7999 11 1 -0.5401 -4.9558 5.1365 12 6 0.9767 -5.5138 6.5608 13 6 0.0285 -6.3849 7.3873 14 6 -0.7320 -5.5076 8.3836 15 1 -0.0227 -5.0123 9.0468 16 6 -1.6664 -6.3655 9.1972 17 7 -1.4187 -6.8818 10.3701 18 7 -2.4380 -7.5560 10.7703 19 6 -3.3825 -7.5000 9.8712 20 7 -2.9217 -6.7386 8.8495 21 6 -1.5398 -4.4543 7.6228 22 6 -0.5920 -3.5834 6.7963 23 6 2.8746 -2.0100 3.4954 24 6 3.7245 -1.2228 2.7482 25 6 3.2559 -0.5725 1.6170 26 9 4.0929 0.1982 0.8886 27 1 -0.3933 0.4418 0.7649 28 1 1.7924 -0.5139 -0.8898 29 1 1.5616 2.4678 -1.2085 30 1 1.5879 2.4586 1.2241 31 1 0.0412 -1.6001 1.6695 32 1 2.0040 -3.5291 5.2774 33 1 1.5187 -6.1386 5.8510 34 1 1.6857 -5.0186 7.2243 35 1 -0.6807 -6.8801 6.7240 36 1 0.6039 -7.1356 7.9289 37 1 -4.3527 -7.9705 9.9319 38 1 -3.3937 -6.5091 8.0338 39 1 -2.2490 -4.9495 6.9596 40 1 -2.0820 -3.8295 8.3327 41 1 0.1170 -3.0883 7.4598 42 1 -1.1674 -2.8331 6.2543 43 1 3.2407 -2.5165 4.3763 44 1 4.7583 -1.1162 3.0419 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16624780_12496548.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:33:38 Heat of formation + Delta-G solvation = -14.269377 kcal Electronic energy + Delta-G solvation = -29630.513318 eV Core-core repulsion = 25271.754371 eV Total energy + Delta-G solvation = -4358.758946 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 347.143 amu Computer time = 1.02 seconds Orbital eigenvalues (eV) -50.26925 -44.15327 -41.55309 -40.17978 -39.10624 -37.81008 -35.82655 -34.60866 -33.14362 -32.34109 -31.87867 -31.71877 -29.55402 -27.13573 -25.48597 -24.35646 -23.87214 -23.24418 -23.22839 -22.13353 -21.46365 -20.90941 -19.35488 -19.28923 -18.56749 -18.12630 -17.82014 -17.05890 -17.00262 -16.86517 -16.40549 -16.32894 -16.13263 -15.90332 -15.71534 -15.22172 -15.15843 -15.13611 -14.82842 -14.34372 -14.22621 -14.13364 -13.86560 -13.76207 -13.35411 -13.26626 -12.87080 -12.83291 -12.48008 -12.40626 -12.29070 -12.19512 -11.96847 -11.84427 -11.67312 -11.51858 -11.33706 -11.17756 -10.97590 -10.27347 -10.20312 -10.01400 -9.72755 -4.85056 -0.48176 0.03160 0.85223 1.16400 1.49444 1.62654 1.84206 1.85386 1.88592 2.02169 2.60334 2.96630 3.14354 3.17944 3.32904 3.50948 3.64353 3.66626 3.69418 3.84923 3.97310 4.01464 4.11585 4.13468 4.21113 4.31648 4.32801 4.40157 4.41703 4.43607 4.49690 4.61433 4.64873 4.79579 4.81489 4.91619 4.99350 5.00583 5.03873 5.04718 5.08544 5.10866 5.16612 5.26742 5.29557 5.45863 5.63909 6.22502 6.32147 6.45892 7.12532 7.69882 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.545 6.545 2 C -0.079 4.079 3 Si 0.743 3.257 4 C -0.164 4.164 5 C -0.040 4.040 6 C -0.154 4.154 7 C 0.560 3.440 8 O -0.576 6.576 9 N -0.706 5.706 10 C 0.145 3.855 11 H 0.073 0.927 12 C -0.116 4.116 13 C -0.102 4.102 14 C 0.003 3.997 15 H 0.110 0.890 16 C 0.191 3.809 17 N -0.342 5.342 18 N -0.354 5.354 19 C 0.168 3.832 20 N -0.570 5.570 21 C -0.108 4.108 22 C -0.122 4.122 23 C -0.046 4.046 24 C -0.143 4.143 25 C 0.117 3.883 26 F -0.101 7.101 27 H 0.387 0.613 28 H 0.133 0.867 29 H -0.291 1.291 30 H -0.284 1.284 31 H 0.134 0.866 32 H 0.417 0.583 33 H 0.085 0.915 34 H 0.093 0.907 35 H 0.068 0.932 36 H 0.073 0.927 37 H 0.261 0.739 38 H 0.445 0.555 39 H 0.072 0.928 40 H 0.072 0.928 41 H 0.083 0.917 42 H 0.055 0.945 43 H 0.176 0.824 44 H 0.180 0.820 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.644 0.298 -0.895 4.739 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.353 6.353 2 C -0.187 4.187 3 Si 0.647 3.353 4 C -0.165 4.165 5 C -0.059 4.059 6 C -0.157 4.157 7 C 0.348 3.652 8 O -0.457 6.457 9 N -0.358 5.358 10 C 0.041 3.959 11 H 0.091 0.909 12 C -0.154 4.154 13 C -0.141 4.141 14 C -0.018 4.018 15 H 0.128 0.872 16 C -0.079 4.079 17 N -0.182 5.182 18 N -0.193 5.193 19 C -0.122 4.122 20 N -0.184 5.184 21 C -0.147 4.147 22 C -0.161 4.161 23 C -0.064 4.064 24 C -0.161 4.161 25 C 0.098 3.902 26 F -0.080 7.080 27 H 0.236 0.764 28 H 0.151 0.849 29 H -0.218 1.218 30 H -0.211 1.211 31 H 0.152 0.848 32 H 0.255 0.745 33 H 0.103 0.897 34 H 0.112 0.888 35 H 0.087 0.913 36 H 0.092 0.908 37 H 0.276 0.724 38 H 0.288 0.712 39 H 0.091 0.909 40 H 0.091 0.909 41 H 0.102 0.898 42 H 0.074 0.926 43 H 0.193 0.807 44 H 0.197 0.803 Dipole moment (debyes) X Y Z Total from point charges 4.535 0.328 -0.237 4.553 hybrid contribution -2.059 0.381 -1.107 2.369 sum 2.476 0.708 -1.344 2.905 Atomic orbital electron populations 1.86572 1.17949 1.80435 1.50328 1.25042 0.83954 1.11404 0.98329 0.94107 0.91640 0.72043 0.77504 1.20304 0.93611 1.02564 1.00061 1.20880 1.00369 0.92370 0.92268 1.19991 0.95404 1.02384 0.97951 1.18358 0.86859 0.79290 0.80687 1.90793 1.19669 1.64179 1.71063 1.45834 1.15142 1.48801 1.25982 1.21046 0.91970 0.90887 0.92004 0.90915 1.21745 0.97935 0.96553 0.99147 1.21478 0.98489 0.97554 0.96625 1.19833 0.93942 0.93020 0.94971 0.87168 1.25233 0.86749 1.01164 0.94796 1.74182 1.21069 1.12518 1.10409 1.74192 0.99084 1.19362 1.26630 1.27285 1.02920 0.96974 0.85041 1.44106 1.13856 1.39765 1.20695 1.21529 0.97936 0.96683 0.98521 1.21816 0.98777 0.97942 0.97536 1.21550 0.90342 0.95236 0.99321 1.21471 1.03235 0.97803 0.93578 1.17823 0.86837 0.93433 0.92131 1.91194 1.69498 1.71166 1.76106 0.76373 0.84938 1.21846 1.21052 0.84802 0.74472 0.89673 0.88834 0.91346 0.90826 0.72380 0.71195 0.90950 0.90942 0.89838 0.92639 0.80693 0.80299 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -2.04 11.64 -148.98 -1.73 -3.77 16 2 C -0.08 -0.05 2.97 71.24 0.21 0.16 16 3 Si 0.74 0.44 29.57 68.60 2.03 2.47 16 4 C -0.16 0.06 5.13 -19.86 -0.10 -0.04 16 5 C -0.04 -0.06 8.78 22.52 0.20 0.14 16 6 C -0.15 0.27 5.87 -20.09 -0.12 0.16 16 7 C 0.56 0.51 7.73 86.75 0.67 1.18 16 8 O -0.58 -5.68 16.01 -3.93 -0.06 -5.75 16 9 N -0.71 4.67 5.03 -445.51 -2.24 2.43 16 10 C 0.15 -0.90 2.45 44.99 0.11 -0.79 16 11 H 0.07 -0.12 7.58 -2.39 -0.02 -0.14 16 12 C -0.12 1.16 5.39 30.60 0.16 1.33 16 13 C -0.10 0.72 5.19 30.59 0.16 0.88 16 14 C 0.00 -0.02 2.66 -11.54 -0.03 -0.05 16 15 H 0.11 -0.53 8.14 -2.39 -0.02 -0.55 16 16 C 0.19 0.20 6.99 137.98 0.96 1.16 16 17 N -0.34 -3.48 12.21 -50.15 -0.61 -4.09 16 18 N -0.35 -3.53 12.21 -59.99 -0.73 -4.26 16 19 C 0.17 -0.13 13.19 180.11 2.37 2.25 16 20 N -0.57 2.36 5.96 -189.86 -1.13 1.22 16 21 C -0.11 0.74 4.96 30.58 0.15 0.89 16 22 C -0.12 0.72 5.49 30.58 0.17 0.89 16 23 C -0.05 0.41 9.54 22.51 0.21 0.62 16 24 C -0.14 1.20 10.01 22.27 0.22 1.42 16 25 C 0.12 -0.44 6.67 22.47 0.15 -0.29 16 26 F -0.10 0.45 13.70 44.97 0.62 1.07 16 27 H 0.39 -0.58 8.43 -74.06 -0.62 -1.21 16 28 H 0.13 -0.14 7.96 -2.39 -0.02 -0.15 16 29 H -0.29 -2.15 7.11 99.48 0.71 -1.44 16 30 H -0.28 -1.45 7.11 99.48 0.71 -0.75 16 31 H 0.13 0.65 6.66 -2.91 -0.02 0.63 16 32 H 0.42 -5.60 6.63 -92.71 -0.61 -6.22 16 33 H 0.08 -0.90 8.14 -2.39 -0.02 -0.92 16 34 H 0.09 -1.19 8.14 -2.39 -0.02 -1.21 16 35 H 0.07 -0.48 8.14 -2.39 -0.02 -0.50 16 36 H 0.07 -0.35 8.14 -2.39 -0.02 -0.37 16 37 H 0.26 -2.73 8.06 -2.91 -0.02 -2.75 16 38 H 0.44 -4.99 8.27 -92.71 -0.77 -5.76 16 39 H 0.07 -0.59 7.51 -2.39 -0.02 -0.61 16 40 H 0.07 -0.42 8.14 -2.38 -0.02 -0.44 16 41 H 0.08 -0.66 8.14 -2.39 -0.02 -0.68 16 42 H 0.05 -0.05 8.14 -2.39 -0.02 -0.07 16 43 H 0.18 -2.95 6.40 -2.91 -0.02 -2.97 16 44 H 0.18 -2.55 8.06 -2.91 -0.02 -2.57 16 Total: 0.00 -30.20 364.25 0.75 -29.45 By element: Atomic # 1 Polarization: -27.79 SS G_CDS: -0.89 Total: -28.67 kcal Atomic # 6 Polarization: 4.40 SS G_CDS: 5.51 Total: 9.91 kcal Atomic # 7 Polarization: 0.02 SS G_CDS: -4.72 Total: -4.70 kcal Atomic # 8 Polarization: -7.72 SS G_CDS: -1.80 Total: -9.52 kcal Atomic # 9 Polarization: 0.45 SS G_CDS: 0.62 Total: 1.07 kcal Atomic # 14 Polarization: 0.44 SS G_CDS: 2.03 Total: 2.47 kcal Total: -30.20 0.75 -29.45 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16624780_12496548.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 15.176 kcal (2) G-P(sol) polarization free energy of solvation -30.199 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -15.023 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.754 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.446 kcal (6) G-S(sol) free energy of system = (1) + (5) -14.269 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.02 seconds