Wall clock time and date at job start Sun Mar 7 2021 05:34:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86305 * 109.46962 * 2 1 4 4 C 1.50698 * 109.47058 * 120.00006 * 2 1 3 5 5 C 1.34195 * 126.53712 * 254.97261 * 4 2 1 6 6 N 1.36863 * 109.96381 * 180.02562 * 5 4 2 7 7 C 1.37401 * 109.98272 * 0.02562 * 6 5 4 8 8 C 1.39337 * 133.25779 * 180.02562 * 7 6 5 9 9 C 1.36347 * 120.23770 * 179.97438 * 8 7 6 10 10 C 1.40169 * 120.67199 * 0.02562 * 9 8 7 11 11 C 1.47653 * 119.97351 * 179.97438 * 10 9 8 12 12 O 1.21584 * 119.99755 * 180.02562 * 11 10 9 13 13 N 1.34777 * 120.00070 * 359.97438 * 11 10 9 14 14 C 1.46504 * 119.99637 * 180.02562 * 13 11 10 15 15 H 1.08993 * 109.47378 * 324.99749 * 14 13 11 16 16 C 1.52999 * 109.47050 * 85.00741 * 14 13 11 17 17 C 1.52997 * 109.46991 * 179.97438 * 16 14 13 18 18 C 1.52996 * 109.47131 * 299.99311 * 17 16 14 19 19 H 1.08996 * 109.47452 * 300.00000 * 18 17 16 20 20 C 1.50703 * 109.47130 * 180.02562 * 18 17 16 21 21 N 1.30517 * 126.34751 * 144.69146 * 20 18 17 22 22 N 1.28593 * 109.67320 * 179.82164 * 21 20 18 23 23 C 1.30515 * 109.67462 * 0.44842 * 22 21 20 24 24 N 1.35494 * 107.30834 * 359.72959 * 23 22 21 25 25 C 1.53002 * 109.46972 * 60.00459 * 18 17 16 26 26 C 1.52997 * 109.46817 * 299.99733 * 25 18 17 27 27 C 1.39189 * 120.05278 * 0.24986 * 10 9 8 28 28 C 1.39235 * 119.38976 * 359.45905 * 27 10 9 29 29 H 0.96700 * 114.00444 * 59.99832 * 1 2 3 30 30 H 1.08997 * 109.47254 * 240.00490 * 2 1 3 31 31 H 1.48499 * 109.99808 * 298.68031 * 3 2 1 32 32 H 1.48497 * 110.00058 * 59.99784 * 3 2 1 33 33 H 1.07997 * 125.02032 * 0.02562 * 5 4 2 34 34 H 0.96993 * 125.00930 * 180.02562 * 6 5 4 35 35 H 1.08002 * 119.88103 * 359.94367 * 8 7 6 36 36 H 1.08003 * 119.66324 * 179.97438 * 9 8 7 37 37 H 0.96998 * 120.00328 * 0.02562 * 13 11 10 38 38 H 1.09002 * 109.46719 * 299.99449 * 16 14 13 39 39 H 1.08993 * 109.47839 * 59.99291 * 16 14 13 40 40 H 1.09001 * 109.47289 * 179.97438 * 17 16 14 41 41 H 1.09000 * 109.47611 * 59.99933 * 17 16 14 42 42 H 1.08005 * 126.34955 * 179.72558 * 23 22 21 43 43 H 0.97003 * 126.98321 * 179.97438 * 24 23 22 44 44 H 1.09002 * 109.47070 * 179.97438 * 25 18 17 45 45 H 1.08996 * 109.47407 * 59.99513 * 25 18 17 46 46 H 1.09001 * 109.47502 * 300.00518 * 26 25 18 47 47 H 1.09001 * 109.47289 * 180.02562 * 26 25 18 48 48 H 1.07997 * 120.30286 * 179.70573 * 27 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 2.4612 -0.1386 2.3227 6 7 2.8035 -1.1004 3.2343 7 6 2.4963 -2.3455 2.7409 8 6 2.6350 -3.6351 3.2499 9 6 2.2310 -4.7103 2.5152 10 6 1.6724 -4.5368 1.2414 11 6 1.2406 -5.7122 0.4590 12 8 0.7564 -5.5622 -0.6462 13 7 1.3840 -6.9513 0.9694 14 6 0.9560 -8.1174 0.1927 15 1 0.0676 -7.8630 -0.3851 16 6 2.0794 -8.5378 -0.7572 17 6 1.6327 -9.7560 -1.5678 18 6 1.3099 -10.9106 -0.6173 19 1 2.1985 -11.1647 -0.0394 20 6 0.8705 -12.1108 -1.4158 21 7 1.1180 -13.3607 -1.1332 22 7 0.5896 -14.1195 -2.0270 23 6 -0.0109 -13.3876 -2.9255 24 7 0.1502 -12.0920 -2.5633 25 6 0.1866 -10.4904 0.3327 26 6 0.6333 -9.2721 1.1433 27 6 1.5298 -3.2578 0.7111 28 6 1.9359 -2.1577 1.4618 29 1 -0.3934 0.4417 -0.7650 30 1 1.7923 -0.5137 -0.8900 31 1 1.5878 2.4585 -1.2242 32 1 1.5614 2.4679 1.2084 33 1 2.5974 0.9237 2.4620 34 1 3.2039 -0.9285 4.1008 35 1 3.0646 -3.7836 4.2296 36 1 2.3432 -5.7059 2.9186 37 1 1.7706 -7.0710 1.8509 38 1 2.3096 -7.7150 -1.4341 39 1 2.9678 -8.7922 -0.1793 40 1 2.4328 -10.0552 -2.2449 41 1 0.7441 -9.5020 -2.1458 42 1 -0.5384 -13.7480 -3.7963 43 1 -0.1823 -11.3097 -3.0308 44 1 -0.0437 -11.3131 1.0095 45 1 -0.7020 -10.2363 -0.2452 46 1 1.5219 -9.5261 1.7212 47 1 -0.1668 -8.9730 1.8204 48 1 1.1043 -3.1198 -0.2719 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16624780_13287722.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:34:25 Heat of formation + Delta-G solvation = 65.429238 kcal Electronic energy + Delta-G solvation = -31974.695770 eV Core-core repulsion = 27611.430980 eV Total energy + Delta-G solvation = -4363.264790 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 368.164 amu Computer time = 1.34 seconds Orbital eigenvalues (eV) -44.08439 -42.47522 -41.07433 -39.40792 -37.91434 -37.44202 -35.69645 -34.53128 -33.38758 -32.52415 -32.01479 -30.91237 -30.58058 -29.28248 -26.46215 -25.37390 -24.31846 -23.93840 -23.46542 -23.20197 -22.12409 -21.42592 -21.08310 -20.47998 -19.33278 -19.09167 -18.47190 -18.42515 -17.64425 -17.02139 -16.79216 -16.42282 -16.30239 -16.01890 -15.80358 -15.60635 -15.42045 -15.19608 -15.04124 -14.97777 -14.78762 -14.66322 -14.24056 -14.09491 -13.83970 -13.74413 -13.41388 -13.39996 -12.80211 -12.74570 -12.59415 -12.43435 -12.36643 -12.27987 -12.13640 -11.80375 -11.78806 -11.75884 -11.53690 -11.26213 -10.81711 -10.77361 -10.37678 -10.14728 -10.06436 -9.31905 -8.82760 -4.99693 -0.05444 0.19174 0.85351 1.26373 1.45691 1.55391 1.80875 1.90912 1.96254 1.98506 1.98848 2.12820 2.95350 3.12238 3.41818 3.47333 3.53513 3.58952 3.69617 3.74809 3.79883 3.85253 3.92800 4.00698 4.06939 4.10975 4.20638 4.23593 4.25320 4.27029 4.37147 4.39249 4.48787 4.50630 4.55889 4.59053 4.67823 4.77025 4.86773 4.89728 4.94927 4.96262 5.01303 5.12152 5.16251 5.20846 5.26393 5.36803 5.46162 5.54866 5.59831 5.97929 6.07477 6.36736 6.52598 6.53631 7.30255 7.79728 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.536 6.536 2 C -0.042 4.042 3 Si 0.683 3.317 4 C -0.145 4.145 5 C 0.064 3.936 6 N -0.584 5.584 7 C 0.119 3.881 8 C -0.133 4.133 9 C -0.067 4.067 10 C -0.170 4.170 11 C 0.567 3.433 12 O -0.539 6.539 13 N -0.726 5.726 14 C 0.145 3.855 15 H 0.090 0.910 16 C -0.127 4.127 17 C -0.114 4.114 18 C -0.003 4.003 19 H 0.110 0.890 20 C 0.186 3.814 21 N -0.291 5.291 22 N -0.296 5.296 23 C 0.154 3.846 24 N -0.581 5.581 25 C -0.106 4.106 26 C -0.126 4.126 27 C 0.008 3.992 28 C -0.102 4.102 29 H 0.378 0.622 30 H 0.074 0.926 31 H -0.259 1.259 32 H -0.255 1.255 33 H 0.177 0.823 34 H 0.422 0.578 35 H 0.128 0.872 36 H 0.128 0.872 37 H 0.400 0.600 38 H 0.076 0.924 39 H 0.071 0.929 40 H 0.074 0.926 41 H 0.064 0.936 42 H 0.222 0.778 43 H 0.429 0.571 44 H 0.080 0.920 45 H 0.067 0.933 46 H 0.075 0.925 47 H 0.077 0.923 48 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.915 5.372 1.707 6.346 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.343 6.343 2 C -0.152 4.152 3 Si 0.583 3.417 4 C -0.152 4.152 5 C -0.062 4.062 6 N -0.187 5.187 7 C 0.010 3.990 8 C -0.153 4.153 9 C -0.087 4.087 10 C -0.175 4.175 11 C 0.356 3.644 12 O -0.417 6.417 13 N -0.377 5.377 14 C 0.040 3.960 15 H 0.108 0.892 16 C -0.166 4.166 17 C -0.153 4.153 18 C -0.024 4.024 19 H 0.128 0.872 20 C -0.083 4.083 21 N -0.132 5.132 22 N -0.136 5.136 23 C -0.136 4.136 24 N -0.194 5.194 25 C -0.145 4.145 26 C -0.164 4.164 27 C -0.011 4.011 28 C -0.107 4.107 29 H 0.225 0.775 30 H 0.092 0.908 31 H -0.184 1.184 32 H -0.179 1.179 33 H 0.194 0.806 34 H 0.260 0.740 35 H 0.146 0.854 36 H 0.146 0.854 37 H 0.235 0.765 38 H 0.094 0.906 39 H 0.090 0.910 40 H 0.093 0.907 41 H 0.083 0.917 42 H 0.239 0.761 43 H 0.269 0.731 44 H 0.098 0.902 45 H 0.085 0.915 46 H 0.094 0.906 47 H 0.096 0.904 48 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 3.070 4.668 2.368 6.069 hybrid contribution -1.484 1.331 -0.715 2.118 sum 1.586 5.999 1.653 6.421 Atomic orbital electron populations 1.86634 1.18096 1.80019 1.49526 1.24071 0.84058 1.09996 0.97107 0.95259 0.91427 0.74342 0.80648 1.19517 1.07901 0.91213 0.96602 1.21682 1.01109 0.94376 0.89073 1.41710 1.54735 1.04127 1.18084 1.18428 0.99902 0.86542 0.94079 1.19669 1.05712 0.88816 1.01123 1.20576 0.96773 0.98340 0.93015 1.19526 1.08388 0.93228 0.96310 1.18178 0.77704 0.82876 0.85673 1.90783 1.44540 1.86105 1.20255 1.45942 1.65000 1.05547 1.21245 1.21014 0.97950 0.84406 0.92610 0.89177 1.21898 0.98574 0.97535 0.98598 1.21600 1.02013 0.94003 0.97720 1.19788 1.00123 0.87784 0.94713 0.87179 1.24878 0.97465 0.97352 0.88577 1.74300 1.19755 0.98442 1.20689 1.74299 1.11289 1.26734 1.01237 1.26579 1.03878 0.80171 1.02931 1.44140 1.43031 1.10434 1.21761 1.21524 0.97143 0.97908 0.97967 1.21811 1.02681 0.93931 0.97978 1.20655 0.92458 0.89229 0.98806 1.18915 1.04514 0.92889 0.94347 0.77469 0.90800 1.18410 1.17916 0.80650 0.74029 0.85392 0.85386 0.76461 0.90580 0.90997 0.90746 0.91700 0.76131 0.73110 0.90182 0.91470 0.90586 0.90445 0.84562 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -1.02 12.86 -35.23 -0.45 -1.47 16 2 C -0.04 -0.01 3.05 36.00 0.11 0.10 16 3 Si 0.68 -1.07 30.80 -169.99 -5.23 -6.30 16 4 C -0.15 -0.20 5.61 -102.69 -0.58 -0.77 16 5 C 0.06 -0.05 10.43 -16.73 -0.17 -0.23 16 6 N -0.58 0.88 6.05 -10.61 -0.06 0.82 16 7 C 0.12 0.08 7.27 -83.95 -0.61 -0.53 16 8 C -0.13 0.11 10.00 -39.85 -0.40 -0.29 16 9 C -0.07 0.05 9.46 -39.54 -0.37 -0.32 16 10 C -0.17 -0.30 5.87 -104.98 -0.62 -0.92 16 11 C 0.57 1.36 7.73 -12.42 -0.10 1.26 16 12 O -0.54 -3.21 15.99 5.29 0.08 -3.13 16 13 N -0.73 0.72 5.03 -54.81 -0.28 0.44 16 14 C 0.14 -0.21 2.46 -67.93 -0.17 -0.38 16 15 H 0.09 0.04 7.58 -51.93 -0.39 -0.36 16 16 C -0.13 0.21 5.49 -26.73 -0.15 0.06 16 17 C -0.11 0.28 4.97 -26.73 -0.13 0.15 16 18 C 0.00 0.01 2.66 -91.77 -0.24 -0.24 16 19 H 0.11 -0.16 8.14 -51.93 -0.42 -0.58 16 20 C 0.19 0.19 6.99 -154.98 -1.08 -0.90 16 21 N -0.29 -1.46 12.21 32.80 0.40 -1.06 16 22 N -0.30 -1.46 12.21 29.69 0.36 -1.09 16 23 C 0.15 0.03 13.19 -89.95 -1.19 -1.15 16 24 N -0.58 0.77 5.96 -11.36 -0.07 0.71 16 25 C -0.11 0.25 5.19 -26.73 -0.14 0.11 16 26 C -0.13 0.39 5.39 -26.73 -0.14 0.24 16 27 C 0.01 0.02 9.64 -38.86 -0.37 -0.35 16 28 C -0.10 -0.26 6.34 -105.16 -0.67 -0.92 16 29 H 0.38 -0.80 8.74 45.56 0.40 -0.40 16 30 H 0.07 -0.05 7.96 -51.93 -0.41 -0.46 16 31 H -0.26 -0.20 7.11 56.52 0.40 0.20 16 32 H -0.25 -0.20 7.04 56.52 0.40 0.20 16 33 H 0.18 -0.61 6.30 -52.49 -0.33 -0.94 16 34 H 0.42 -1.99 8.96 -40.82 -0.37 -2.35 16 35 H 0.13 -0.42 8.06 -52.49 -0.42 -0.84 16 36 H 0.13 -0.50 6.36 -52.48 -0.33 -0.83 16 37 H 0.40 -1.40 6.60 -40.82 -0.27 -1.67 16 38 H 0.08 0.03 8.14 -51.93 -0.42 -0.40 16 39 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 40 H 0.07 -0.15 8.14 -51.93 -0.42 -0.58 16 41 H 0.06 -0.20 7.52 -51.93 -0.39 -0.59 16 42 H 0.22 -0.91 8.06 -52.48 -0.42 -1.34 16 43 H 0.43 -1.97 8.29 -40.82 -0.34 -2.31 16 44 H 0.08 -0.11 8.14 -51.93 -0.42 -0.54 16 45 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 46 H 0.08 -0.30 8.14 -51.93 -0.42 -0.72 16 47 H 0.08 -0.23 8.14 -51.93 -0.42 -0.66 16 48 H 0.14 0.52 7.64 -52.49 -0.40 0.12 16 LS Contribution 394.21 15.07 5.94 5.94 Total: 0.00 -13.85 394.21 -12.59 -26.44 By element: Atomic # 1 Polarization: -9.95 SS G_CDS: -6.27 Total: -16.21 kcal Atomic # 6 Polarization: 1.94 SS G_CDS: -7.02 Total: -5.08 kcal Atomic # 7 Polarization: -0.54 SS G_CDS: 0.36 Total: -0.19 kcal Atomic # 8 Polarization: -4.23 SS G_CDS: -0.37 Total: -4.60 kcal Atomic # 14 Polarization: -1.07 SS G_CDS: -5.23 Total: -6.30 kcal Total LS contribution 5.94 Total: 5.94 kcal Total: -13.85 -12.59 -26.44 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16624780_13287722.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 91.872 kcal (2) G-P(sol) polarization free energy of solvation -13.848 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 78.024 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.594 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.443 kcal (6) G-S(sol) free energy of system = (1) + (5) 65.429 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.34 seconds