Wall clock time and date at job start Sun Mar 7 2021 05:34:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86293 * 109.47041 * 2 1 4 4 C 1.50707 * 109.46442 * 119.99698 * 2 1 3 5 5 C 1.38584 * 120.32521 * 64.72316 * 4 2 1 6 6 C 1.38628 * 118.48715 * 179.75779 * 5 4 2 7 7 C 1.39270 * 119.05898 * 0.53180 * 6 5 4 8 8 C 1.48168 * 119.72113 * 179.72515 * 7 6 5 9 9 O 1.21517 * 120.00120 * 359.97438 * 8 7 6 10 10 N 1.34772 * 120.00013 * 179.97438 * 8 7 6 11 11 C 1.46504 * 120.00210 * 180.02562 * 10 8 7 12 12 H 1.08999 * 109.47164 * 35.00146 * 11 10 8 13 13 C 1.53002 * 109.47169 * 155.00016 * 11 10 8 14 14 C 1.52998 * 109.47054 * 180.02562 * 13 11 10 15 15 C 1.53007 * 109.47159 * 300.00545 * 14 13 11 16 16 H 1.09006 * 109.46822 * 299.99265 * 15 14 13 17 17 C 1.50698 * 109.47000 * 180.02562 * 15 14 13 18 18 N 1.30518 * 126.35384 * 95.02292 * 17 15 14 19 19 N 1.28589 * 109.67593 * 179.97438 * 18 17 15 20 20 C 1.30519 * 109.67442 * 0.02562 * 19 18 17 21 21 N 1.35491 * 107.30744 * 359.76672 * 20 19 18 22 22 C 1.52990 * 109.47439 * 59.99535 * 15 14 13 23 23 C 1.52998 * 109.47325 * 300.00364 * 22 15 14 24 24 N 1.32742 * 120.55619 * 359.71139 * 7 6 5 25 25 C 1.31497 * 121.64360 * 0.02562 * 24 7 6 26 26 H 0.96700 * 114.00311 * 300.00531 * 1 2 3 27 27 H 1.08999 * 109.47293 * 239.99660 * 2 1 3 28 28 H 1.48501 * 109.99918 * 178.67685 * 3 2 1 29 29 H 1.48506 * 109.99973 * 299.99283 * 3 2 1 30 30 H 1.08003 * 120.75280 * 0.02562 * 5 4 2 31 31 H 1.08001 * 120.47247 * 180.24167 * 6 5 4 32 32 H 0.96999 * 120.00312 * 0.02562 * 10 8 7 33 33 H 1.08994 * 109.47165 * 299.99867 * 13 11 10 34 34 H 1.09006 * 109.46937 * 60.00403 * 13 11 10 35 35 H 1.08999 * 109.46955 * 59.99686 * 14 13 11 36 36 H 1.08998 * 109.47473 * 180.02562 * 14 13 11 37 37 H 1.08003 * 126.34554 * 180.02562 * 20 19 18 38 38 H 0.96994 * 126.98585 * 180.22589 * 21 20 19 39 39 H 1.08999 * 109.47368 * 60.00435 * 22 15 14 40 40 H 1.09002 * 109.47556 * 180.02562 * 22 15 14 41 41 H 1.08999 * 109.47250 * 299.99862 * 23 22 15 42 42 H 1.09001 * 109.46979 * 179.97438 * 23 22 15 43 43 H 1.07998 * 119.54650 * 180.02562 * 25 24 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9312 -0.7104 1.2306 5 6 1.6828 -2.0621 1.4086 6 6 2.1668 -2.6784 2.5521 7 6 2.8723 -1.9194 3.4826 8 6 3.3908 -2.5618 4.7130 9 8 3.1996 -3.7460 4.9070 10 7 4.0747 -1.8327 5.6169 11 6 4.5880 -2.4680 6.8332 12 1 4.8960 -3.4890 6.6076 13 6 5.7891 -1.6763 7.3542 14 6 6.3255 -2.3401 8.6240 15 6 5.2283 -2.3629 9.6901 16 1 4.9202 -1.3420 9.9163 17 6 5.7568 -3.0162 10.9411 18 7 6.2686 -2.4064 11.9754 19 7 6.6157 -3.2722 12.8604 20 6 6.3418 -4.4738 12.4308 21 7 5.7844 -4.3454 11.2026 22 6 4.0272 -3.1545 9.1691 23 6 3.4908 -2.4907 7.8993 24 7 3.0842 -0.6253 3.2764 25 6 2.6409 -0.0169 2.1982 26 1 -0.3934 0.4418 0.7650 27 1 1.7924 -0.5139 -0.8899 28 1 3.5346 1.7702 0.0322 29 1 1.5616 2.4678 -1.2086 30 1 1.1285 -2.6236 0.6710 31 1 1.9951 -3.7312 2.7214 32 1 4.2271 -0.8874 5.4623 33 1 6.5709 -1.6606 6.5949 34 1 5.4811 -0.6553 7.5798 35 1 6.6335 -3.3610 8.3980 36 1 7.1809 -1.7759 8.9955 37 1 6.5218 -5.3988 12.9586 38 1 5.4706 -5.0600 10.6266 39 1 4.3352 -4.1753 8.9431 40 1 3.2453 -3.1703 9.9285 41 1 3.1827 -1.4698 8.1253 42 1 2.6354 -3.0549 7.5279 43 1 2.8332 1.0374 2.0646 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16624780_13287726.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:34:30 Heat of formation + Delta-G solvation = 41.531799 kcal Electronic energy + Delta-G solvation = -27160.813891 eV Core-core repulsion = 23208.502730 eV Total energy + Delta-G solvation = -3952.311161 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 330.148 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -44.10763 -41.96324 -40.76507 -39.27808 -37.99937 -35.81811 -34.59276 -33.94163 -33.07666 -32.27293 -32.05976 -29.75380 -27.77619 -25.18189 -24.92164 -24.24818 -23.74260 -23.20354 -22.21630 -21.65557 -21.16165 -19.37852 -19.24166 -18.70780 -17.93625 -17.09952 -16.86228 -16.77074 -16.60626 -16.37276 -16.21404 -16.13001 -15.85014 -15.38420 -15.28115 -14.94406 -14.56905 -14.45203 -14.38431 -14.13928 -13.78648 -13.65419 -13.44550 -12.83294 -12.69870 -12.50789 -12.41558 -12.32887 -12.21212 -11.83240 -11.79579 -11.59003 -11.40944 -11.24693 -11.13820 -10.73984 -10.69080 -10.39090 -10.17051 -10.11236 -5.22133 -0.63900 -0.01349 0.83021 1.05333 1.45204 1.57372 1.77995 1.81540 1.91251 1.94278 2.63431 2.85868 3.09476 3.20659 3.36866 3.38367 3.48912 3.57829 3.65932 3.70692 3.81023 3.85403 3.95607 4.03545 4.06523 4.15631 4.18934 4.22329 4.24475 4.35676 4.45801 4.47562 4.51693 4.62475 4.76203 4.83093 4.86026 4.89288 4.90328 4.92711 5.08133 5.12793 5.15738 5.28047 5.37802 6.05148 6.25572 6.33269 6.56094 7.06952 7.77699 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.536 6.536 2 C -0.067 4.067 3 Si 0.686 3.314 4 C -0.150 4.150 5 C -0.053 4.053 6 C -0.108 4.108 7 C 0.080 3.920 8 C 0.574 3.426 9 O -0.529 6.529 10 N -0.707 5.707 11 C 0.142 3.858 12 H 0.091 0.909 13 C -0.126 4.126 14 C -0.106 4.106 15 C -0.004 4.004 16 H 0.111 0.889 17 C 0.186 3.814 18 N -0.291 5.291 19 N -0.296 5.296 20 C 0.154 3.846 21 N -0.581 5.581 22 C -0.114 4.114 23 C -0.128 4.128 24 N -0.452 5.452 25 C 0.105 3.895 26 H 0.381 0.619 27 H 0.120 0.880 28 H -0.252 1.252 29 H -0.249 1.249 30 H 0.147 0.853 31 H 0.152 0.848 32 H 0.413 0.587 33 H 0.078 0.922 34 H 0.078 0.922 35 H 0.067 0.933 36 H 0.081 0.919 37 H 0.222 0.778 38 H 0.429 0.571 39 H 0.065 0.935 40 H 0.075 0.925 41 H 0.073 0.927 42 H 0.075 0.925 43 H 0.165 0.835 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.030 0.253 -2.841 3.501 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.341 6.341 2 C -0.178 4.178 3 Si 0.587 3.413 4 C -0.152 4.152 5 C -0.079 4.079 6 C -0.129 4.129 7 C -0.058 4.058 8 C 0.359 3.641 9 O -0.405 6.405 10 N -0.358 5.358 11 C 0.038 3.962 12 H 0.109 0.891 13 C -0.164 4.164 14 C -0.145 4.145 15 C -0.025 4.025 16 H 0.129 0.871 17 C -0.083 4.083 18 N -0.131 5.131 19 N -0.135 5.135 20 C -0.135 4.135 21 N -0.194 5.194 22 C -0.153 4.153 23 C -0.166 4.166 24 N -0.163 5.163 25 C -0.055 4.055 26 H 0.229 0.771 27 H 0.138 0.862 28 H -0.177 1.177 29 H -0.173 1.173 30 H 0.165 0.835 31 H 0.170 0.830 32 H 0.249 0.751 33 H 0.096 0.904 34 H 0.096 0.904 35 H 0.085 0.915 36 H 0.099 0.901 37 H 0.239 0.761 38 H 0.269 0.731 39 H 0.083 0.917 40 H 0.093 0.907 41 H 0.092 0.908 42 H 0.094 0.906 43 H 0.181 0.819 Dipole moment (debyes) X Y Z Total from point charges -0.552 1.362 -1.967 2.455 hybrid contribution -0.903 -2.240 -1.924 3.088 sum -1.455 -0.878 -3.891 4.246 Atomic orbital electron populations 1.86545 1.16557 1.81658 1.49345 1.25055 0.85609 1.10458 0.96725 0.94823 0.81264 0.77205 0.88011 1.21666 0.99437 0.95869 0.98260 1.21567 0.95797 0.93765 0.96752 1.22228 0.95369 1.02273 0.93009 1.21161 0.98606 0.90289 0.95788 1.17850 0.78178 0.85920 0.82161 1.90813 1.57693 1.14841 1.77133 1.45884 1.55334 1.14069 1.20473 1.21103 0.93351 0.98296 0.83479 0.89091 1.21806 0.97128 0.99995 0.97448 1.21530 0.97635 1.01924 0.93440 1.19792 0.95125 1.00333 0.87207 0.87105 1.24867 1.02835 0.81091 0.99491 1.74302 1.14700 1.25395 0.98743 1.74304 1.19215 0.97233 1.22774 1.26584 1.00180 1.01289 0.85494 1.44138 1.48289 1.09440 1.17525 1.21597 0.96952 0.99034 0.97725 1.21900 0.98609 1.02074 0.94037 1.67506 1.18072 1.09469 1.21298 1.22605 0.94227 0.99736 0.88891 0.77120 0.86236 1.17695 1.17323 0.83483 0.82997 0.75102 0.90383 0.90377 0.91466 0.90084 0.76122 0.73131 0.91671 0.90658 0.90810 0.90626 0.81868 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.96 12.84 -35.23 -0.45 0.50 16 2 C -0.07 0.16 2.82 36.01 0.10 0.26 16 3 Si 0.69 -2.10 29.83 -169.99 -5.07 -7.17 16 4 C -0.15 0.26 5.37 -104.36 -0.56 -0.30 16 5 C -0.05 0.06 9.83 -39.31 -0.39 -0.33 16 6 C -0.11 -0.01 9.63 -39.05 -0.38 -0.38 16 7 C 0.08 0.07 6.75 -83.01 -0.56 -0.49 16 8 C 0.57 0.91 7.78 -12.18 -0.09 0.81 16 9 O -0.53 -2.27 15.99 5.35 0.09 -2.19 16 10 N -0.71 0.64 5.07 -54.65 -0.28 0.36 16 11 C 0.14 -0.26 2.45 -67.93 -0.17 -0.43 16 12 H 0.09 -0.04 7.58 -51.93 -0.39 -0.43 16 13 C -0.13 0.41 5.39 -26.73 -0.14 0.26 16 14 C -0.11 0.28 5.19 -26.73 -0.14 0.14 16 15 C 0.00 0.01 2.66 -91.77 -0.24 -0.24 16 16 H 0.11 -0.19 8.14 -51.93 -0.42 -0.61 16 17 C 0.19 0.13 6.99 -154.98 -1.08 -0.95 16 18 N -0.29 -1.39 12.21 32.80 0.40 -0.99 16 19 N -0.30 -1.39 12.21 29.69 0.36 -1.03 16 20 C 0.15 -0.01 13.19 -89.95 -1.19 -1.19 16 21 N -0.58 0.96 5.96 -11.36 -0.07 0.90 16 22 C -0.11 0.33 4.97 -26.74 -0.13 0.20 16 23 C -0.13 0.27 5.50 -26.73 -0.15 0.13 16 24 N -0.45 0.03 9.54 -9.80 -0.09 -0.07 16 25 C 0.10 -0.17 9.84 -17.56 -0.17 -0.34 16 26 H 0.38 -2.12 8.70 45.56 0.40 -1.73 16 27 H 0.12 -0.26 7.96 -51.93 -0.41 -0.67 16 28 H -0.25 0.18 7.11 56.52 0.40 0.59 16 29 H -0.25 -0.11 7.11 56.52 0.40 0.29 16 30 H 0.15 -0.36 8.06 -52.48 -0.42 -0.78 16 31 H 0.15 -0.04 7.64 -52.49 -0.40 -0.44 16 32 H 0.41 -0.88 7.93 -40.82 -0.32 -1.21 16 33 H 0.08 -0.24 8.14 -51.93 -0.42 -0.67 16 34 H 0.08 -0.30 8.14 -51.93 -0.42 -0.72 16 35 H 0.07 -0.19 8.14 -51.93 -0.42 -0.61 16 36 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 37 H 0.22 -0.97 8.06 -52.48 -0.42 -1.39 16 38 H 0.43 -2.14 8.28 -40.82 -0.34 -2.48 16 39 H 0.06 -0.24 7.52 -51.93 -0.39 -0.63 16 40 H 0.07 -0.19 8.14 -51.93 -0.42 -0.61 16 41 H 0.07 -0.18 8.14 -51.93 -0.42 -0.61 16 42 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 43 H 0.16 -0.67 4.92 -52.49 -0.26 -0.93 16 LS Contribution 357.98 15.07 5.39 5.39 Total: 0.00 -11.23 357.98 -10.56 -21.79 By element: Atomic # 1 Polarization: -9.10 SS G_CDS: -5.55 Total: -14.65 kcal Atomic # 6 Polarization: 2.44 SS G_CDS: -5.29 Total: -2.86 kcal Atomic # 7 Polarization: -1.15 SS G_CDS: 0.32 Total: -0.83 kcal Atomic # 8 Polarization: -1.32 SS G_CDS: -0.37 Total: -1.68 kcal Atomic # 14 Polarization: -2.10 SS G_CDS: -5.07 Total: -7.17 kcal Total LS contribution 5.39 Total: 5.39 kcal Total: -11.23 -10.56 -21.79 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16624780_13287726.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 63.321 kcal (2) G-P(sol) polarization free energy of solvation -11.233 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 52.088 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.556 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.789 kcal (6) G-S(sol) free energy of system = (1) + (5) 41.532 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds