Wall clock time and date at job start Sun Mar 7 2021 05:34:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46503 * 1 3 3 C 1.34648 * 124.85123 * 2 1 4 4 C 1.36763 * 108.39728 * 180.02562 * 3 2 1 5 5 C 1.47269 * 126.94259 * 179.97438 * 4 3 2 6 6 O 1.21633 * 120.00004 * 180.02562 * 5 4 3 7 7 N 1.34777 * 120.00021 * 0.02855 * 5 4 3 8 8 C 1.46498 * 119.99828 * 180.27620 * 7 5 4 9 9 H 1.08995 * 109.47013 * 324.72129 * 8 7 5 10 10 C 1.52999 * 109.47257 * 84.72116 * 8 7 5 11 11 C 1.53003 * 109.47010 * 179.97438 * 10 8 7 12 12 C 1.52997 * 109.47127 * 300.00125 * 11 10 8 13 13 H 1.08995 * 109.47275 * 299.99879 * 12 11 10 14 14 C 1.50702 * 109.46928 * 180.02562 * 12 11 10 15 15 N 1.30517 * 126.34624 * 144.69019 * 14 12 11 16 16 N 1.28597 * 109.67410 * 179.81914 * 15 14 12 17 17 C 1.30523 * 109.67235 * 0.45012 * 16 15 14 18 18 N 1.35489 * 126.34576 * 324.99611 * 14 12 11 19 19 C 1.52999 * 109.47278 * 60.00039 * 12 11 10 20 20 C 1.52994 * 109.47024 * 299.99839 * 19 12 11 21 21 C 1.46686 * 106.11707 * 0.22694 * 4 3 2 22 22 C 1.34492 * 106.32888 * 359.62619 * 21 4 3 23 23 C 1.50703 * 125.56836 * 180.08924 * 22 21 4 24 24 O 1.42905 * 109.46617 * 150.33523 * 23 22 21 25 25 Si 1.86295 * 109.47203 * 30.33575 * 23 22 21 26 26 H 1.09005 * 109.47322 * 89.97380 * 1 2 3 27 27 H 1.09003 * 109.47278 * 209.97450 * 1 2 3 28 28 H 1.08999 * 109.47428 * 329.97708 * 1 2 3 29 29 H 1.08005 * 125.79963 * 0.04161 * 3 2 1 30 30 H 0.97001 * 119.99727 * 359.97438 * 7 5 4 31 31 H 1.08996 * 109.47245 * 299.99926 * 10 8 7 32 32 H 1.08995 * 109.47098 * 60.00065 * 10 8 7 33 33 H 1.08996 * 109.47077 * 179.97438 * 11 10 8 34 34 H 1.09003 * 109.47062 * 60.00488 * 11 10 8 35 35 H 1.07997 * 126.34921 * 179.72430 * 17 16 15 36 36 H 0.97001 * 126.98140 * 0.02562 * 18 14 12 37 37 H 1.08996 * 109.47245 * 179.97438 * 19 12 11 38 38 H 1.09003 * 109.46809 * 59.99699 * 19 12 11 39 39 H 1.08994 * 109.47599 * 300.00048 * 20 19 12 40 40 H 1.08998 * 109.47530 * 179.97438 * 20 19 12 41 41 H 1.07997 * 126.83889 * 179.74679 * 21 4 3 42 42 H 1.08997 * 109.47074 * 270.33481 * 23 22 21 43 43 H 0.96698 * 114.00087 * 299.99787 * 24 23 22 44 44 H 1.48500 * 110.00114 * 179.97438 * 25 23 22 45 45 H 1.48500 * 110.00308 * 301.31769 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2345 1.1050 0.0000 4 6 3.5461 0.7176 -0.0006 5 6 4.7283 1.5957 -0.0013 6 8 5.8447 1.1127 -0.0023 7 7 4.5734 2.9346 -0.0009 8 6 5.7494 3.8080 -0.0077 9 1 6.5446 3.3514 0.5815 10 6 6.2300 4.0051 -1.4469 11 6 7.4579 4.9179 -1.4540 12 6 7.0888 6.2740 -0.8493 13 1 6.2935 6.7303 -1.4386 14 6 8.2981 7.1732 -0.8569 15 7 8.3011 8.4639 -1.0508 16 7 9.5060 8.9086 -0.9866 17 6 10.3275 7.9203 -0.7584 18 7 9.5843 6.7908 -0.6695 19 6 6.6083 6.0769 0.5898 20 6 5.3804 5.1642 0.5970 21 6 3.5375 -0.7492 -0.0065 22 6 2.2446 -1.1198 -0.0006 23 6 1.7397 -2.5397 -0.0016 24 8 0.4806 -2.5979 0.6718 25 14 2.9646 -3.6350 0.8761 26 1 -0.3634 0.0005 -1.0277 27 1 -0.3634 -0.8902 0.5134 28 1 -0.3634 0.8897 0.5142 29 1 1.8766 2.1240 0.0006 30 1 3.6831 3.3197 -0.0005 31 1 6.4925 3.0390 -1.8778 32 1 5.4348 4.4618 -2.0361 33 1 7.8005 5.0580 -2.4792 34 1 8.2533 4.4616 -0.8647 35 1 11.4006 7.9899 -0.6588 36 1 9.9076 5.8911 -0.5054 37 1 6.3458 7.0430 1.0208 38 1 7.4036 5.6206 1.1791 39 1 4.5851 5.6204 0.0076 40 1 5.0382 5.0234 1.6222 41 1 4.3980 -1.4018 -0.0123 42 1 1.6181 -2.8814 -1.0295 43 1 0.5138 -2.3075 1.5936 44 1 2.4780 -5.0380 0.8826 45 1 4.2868 -3.5587 0.2044 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16624780_13287730.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:34:33 Heat of formation + Delta-G solvation = 53.457141 kcal Electronic energy + Delta-G solvation = -27965.705609 eV Core-core repulsion = 23986.600091 eV Total energy + Delta-G solvation = -3979.105518 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 332.164 amu Computer time = 1.07 seconds Orbital eigenvalues (eV) -44.14496 -42.45568 -40.76982 -39.08536 -37.79422 -35.65226 -34.56820 -33.74940 -32.54491 -31.85740 -31.31194 -29.54267 -27.45069 -26.31412 -24.81947 -24.13491 -23.49882 -23.02929 -22.02002 -21.25515 -20.82512 -20.38112 -19.29831 -18.96606 -17.47113 -17.10105 -17.00781 -16.80978 -16.71983 -16.35470 -16.05524 -15.72524 -15.51387 -15.41183 -15.07131 -15.03974 -14.85088 -14.64283 -14.08830 -14.02408 -13.68633 -13.43393 -13.26980 -13.23769 -12.97765 -12.81986 -12.39143 -12.28288 -12.18180 -12.13289 -12.08142 -11.83615 -11.63824 -11.49720 -11.29157 -10.93960 -10.69105 -10.24774 -10.07383 -9.55686 -9.20520 -4.99738 0.76518 0.86069 1.03229 1.38916 1.63433 1.84883 1.89026 1.89997 2.07005 2.29098 2.57664 3.17969 3.29729 3.53968 3.57603 3.68708 3.88451 3.90629 3.97758 4.00559 4.14519 4.23192 4.31108 4.35766 4.39602 4.40578 4.41458 4.44525 4.45379 4.52282 4.53953 4.68766 4.80496 4.84653 4.95157 4.99448 5.02025 5.05748 5.06417 5.10085 5.18088 5.29680 5.35010 5.56643 5.65785 5.97727 6.23216 6.25908 6.59269 6.69012 7.38153 7.70542 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.045 3.955 2 N -0.421 5.421 3 C 0.075 3.925 4 C -0.261 4.261 5 C 0.589 3.411 6 O -0.596 6.596 7 N -0.712 5.712 8 C 0.147 3.853 9 H 0.069 0.931 10 C -0.122 4.122 11 C -0.107 4.107 12 C 0.004 3.996 13 H 0.109 0.891 14 C 0.192 3.808 15 N -0.342 5.342 16 N -0.354 5.354 17 C 0.168 3.832 18 N -0.570 5.570 19 C -0.102 4.102 20 C -0.114 4.114 21 C -0.168 4.168 22 C -0.016 4.016 23 C -0.034 4.034 24 O -0.544 6.544 25 Si 0.787 3.213 26 H 0.073 0.927 27 H 0.118 0.882 28 H 0.108 0.892 29 H 0.211 0.789 30 H 0.413 0.587 31 H 0.050 0.950 32 H 0.080 0.920 33 H 0.071 0.929 34 H 0.072 0.928 35 H 0.261 0.739 36 H 0.445 0.555 37 H 0.074 0.926 38 H 0.068 0.932 39 H 0.091 0.909 40 H 0.084 0.916 41 H 0.130 0.870 42 H 0.114 0.886 43 H 0.398 0.602 44 H -0.285 1.285 45 H -0.299 1.299 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.842 -1.859 4.089 7.369 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.095 4.095 2 N -0.095 5.095 3 C -0.062 4.062 4 C -0.271 4.271 5 C 0.379 3.621 6 O -0.478 6.478 7 N -0.363 5.363 8 C 0.043 3.957 9 H 0.087 0.913 10 C -0.161 4.161 11 C -0.146 4.146 12 C -0.017 4.017 13 H 0.127 0.873 14 C -0.079 4.079 15 N -0.182 5.182 16 N -0.192 5.192 17 C -0.122 4.122 18 N -0.184 5.184 19 C -0.141 4.141 20 C -0.152 4.152 21 C -0.192 4.192 22 C -0.126 4.126 23 C -0.145 4.145 24 O -0.353 6.353 25 Si 0.692 3.308 26 H 0.091 0.909 27 H 0.136 0.864 28 H 0.126 0.874 29 H 0.227 0.773 30 H 0.250 0.750 31 H 0.069 0.931 32 H 0.099 0.901 33 H 0.090 0.910 34 H 0.090 0.910 35 H 0.277 0.723 36 H 0.288 0.712 37 H 0.092 0.908 38 H 0.087 0.913 39 H 0.109 0.891 40 H 0.103 0.897 41 H 0.148 0.852 42 H 0.131 0.869 43 H 0.249 0.751 44 H -0.212 1.212 45 H -0.226 1.226 Dipole moment (debyes) X Y Z Total from point charges -5.656 -1.539 3.180 6.668 hybrid contribution 0.711 -1.265 -0.580 1.563 sum -4.945 -2.804 2.599 6.251 Atomic orbital electron populations 1.22793 0.74287 1.07629 1.04750 1.43724 1.08124 1.04362 1.53280 1.22442 0.88867 0.93333 1.01578 1.20314 0.92519 0.93544 1.20707 1.17664 0.87687 0.82308 0.74449 1.90746 1.27768 1.76250 1.52990 1.45723 1.10569 1.04657 1.75315 1.20968 0.88063 0.90412 0.96273 0.91261 1.21820 0.98079 0.99164 0.96998 1.21527 0.98492 0.93017 1.01551 1.19818 0.90481 0.92110 0.99315 0.87257 1.25208 0.87682 0.93293 1.01707 1.74182 1.14896 1.08256 1.20835 1.74189 0.96821 1.28019 1.20220 1.27290 1.02047 0.81313 1.01545 1.44109 1.06890 1.12983 1.54433 1.21477 0.98208 1.00482 0.93919 1.21724 0.98326 0.92472 1.02650 1.21724 0.95389 0.93978 1.08157 1.20736 0.90105 0.89986 1.11739 1.24677 0.93654 0.94189 1.02007 1.86429 1.29033 1.89172 1.30639 0.93227 0.73499 0.75276 0.88762 0.90860 0.86406 0.87354 0.77265 0.74958 0.93090 0.90118 0.91041 0.90961 0.72327 0.71193 0.90750 0.91314 0.89061 0.89693 0.85172 0.86908 0.75114 1.21245 1.22631 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 -0.46 10.71 127.77 1.37 0.91 16 2 N -0.42 1.85 3.09 -533.23 -1.65 0.20 16 3 C 0.08 -0.36 10.83 83.92 0.91 0.55 16 4 C -0.26 -0.84 6.29 -19.04 -0.12 -0.96 16 5 C 0.59 3.57 7.77 86.62 0.67 4.25 16 6 O -0.60 -9.32 16.64 -4.14 -0.07 -9.39 16 7 N -0.71 1.89 5.07 -445.94 -2.26 -0.37 16 8 C 0.15 -0.44 2.45 44.99 0.11 -0.33 16 9 H 0.07 0.12 7.58 -2.39 -0.02 0.11 16 10 C -0.12 0.32 5.49 30.60 0.17 0.49 16 11 C -0.11 0.49 4.97 30.59 0.15 0.64 16 12 C 0.00 -0.01 2.66 -11.54 -0.03 -0.04 16 13 H 0.11 -0.33 8.14 -2.39 -0.02 -0.35 16 14 C 0.19 0.44 6.99 137.98 0.96 1.40 16 15 N -0.34 -3.81 12.21 -50.16 -0.61 -4.42 16 16 N -0.35 -3.80 12.21 -59.99 -0.73 -4.54 16 17 C 0.17 0.01 13.19 180.11 2.38 2.38 16 18 N -0.57 1.72 5.96 -189.86 -1.13 0.59 16 19 C -0.10 0.55 5.19 30.59 0.16 0.71 16 20 C -0.11 0.88 5.39 30.59 0.16 1.05 16 21 C -0.17 -0.89 9.50 23.62 0.22 -0.67 16 22 C -0.02 0.00 6.13 40.99 0.25 0.25 16 23 C -0.03 0.09 2.98 71.24 0.21 0.30 16 24 O -0.54 3.21 9.95 -148.98 -1.48 1.72 16 25 Si 0.79 -1.22 31.31 68.60 2.15 0.93 16 26 H 0.07 -0.69 8.14 -2.38 -0.02 -0.71 16 27 H 0.12 -1.27 4.93 -2.39 -0.01 -1.28 16 28 H 0.11 -1.63 8.13 -2.39 -0.02 -1.65 16 29 H 0.21 -2.88 7.45 -2.91 -0.02 -2.90 16 30 H 0.41 -4.00 7.54 -92.71 -0.70 -4.70 16 31 H 0.05 0.16 8.14 -2.39 -0.02 0.14 16 32 H 0.08 -0.37 8.14 -2.39 -0.02 -0.39 16 33 H 0.07 -0.26 8.14 -2.39 -0.02 -0.28 16 34 H 0.07 -0.43 7.52 -2.39 -0.02 -0.45 16 35 H 0.26 -2.56 8.06 -2.91 -0.02 -2.58 16 36 H 0.44 -4.45 8.29 -92.71 -0.77 -5.22 16 37 H 0.07 -0.26 8.14 -2.39 -0.02 -0.28 16 38 H 0.07 -0.37 8.14 -2.39 -0.02 -0.39 16 39 H 0.09 -0.95 8.14 -2.39 -0.02 -0.97 16 40 H 0.08 -0.72 8.14 -2.39 -0.02 -0.74 16 41 H 0.13 1.11 6.68 -2.91 -0.02 1.09 16 42 H 0.11 -0.16 7.96 -2.39 -0.02 -0.18 16 43 H 0.40 -5.35 8.38 -74.06 -0.62 -5.97 16 44 H -0.29 -1.13 7.11 99.48 0.71 -0.43 16 45 H -0.30 -1.88 6.77 99.48 0.67 -1.21 16 Total: 0.00 -34.44 366.65 0.76 -33.68 By element: Atomic # 1 Polarization: -28.30 SS G_CDS: -1.03 Total: -29.33 kcal Atomic # 6 Polarization: 3.34 SS G_CDS: 7.58 Total: 10.93 kcal Atomic # 7 Polarization: -2.15 SS G_CDS: -6.38 Total: -8.54 kcal Atomic # 8 Polarization: -6.11 SS G_CDS: -1.55 Total: -7.66 kcal Atomic # 14 Polarization: -1.22 SS G_CDS: 2.15 Total: 0.93 kcal Total: -34.44 0.76 -33.68 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16624780_13287730.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 87.136 kcal (2) G-P(sol) polarization free energy of solvation -34.441 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 52.695 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.762 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.679 kcal (6) G-S(sol) free energy of system = (1) + (5) 53.457 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.07 seconds