Wall clock time and date at job start Sun Mar 7 2021 05:34:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50694 * 1 3 3 C 1.38972 * 119.95791 * 2 1 4 4 O 1.35710 * 119.91351 * 0.02562 * 3 2 1 5 5 C 1.39023 * 120.17935 * 179.97438 * 3 2 1 6 6 C 1.50703 * 119.95531 * 180.02562 * 5 3 2 7 7 O 1.42898 * 109.46956 * 74.98372 * 6 5 3 8 8 Si 1.86301 * 109.46751 * 194.97947 * 6 5 3 9 9 C 1.37683 * 120.08646 * 0.02562 * 5 3 2 10 10 C 1.39752 * 119.91056 * 0.02562 * 9 5 3 11 11 C 1.47598 * 120.08597 * 180.02562 * 10 9 5 12 12 O 1.21582 * 120.00246 * 0.02562 * 11 10 9 13 13 N 1.34777 * 119.99936 * 179.97438 * 11 10 9 14 14 C 1.46505 * 119.99931 * 180.02562 * 13 11 10 15 15 H 1.08998 * 109.47277 * 34.99793 * 14 13 11 16 16 C 1.52998 * 109.46986 * 155.00001 * 14 13 11 17 17 C 1.52999 * 109.47201 * 179.97438 * 16 14 13 18 18 C 1.53008 * 109.46941 * 300.00317 * 17 16 14 19 19 H 1.08998 * 109.46904 * 299.99572 * 18 17 16 20 20 C 1.50704 * 109.46870 * 179.97438 * 18 17 16 21 21 N 1.30523 * 126.34835 * 95.02314 * 20 18 17 22 22 N 1.28592 * 109.67062 * 179.97438 * 21 20 18 23 23 C 1.30524 * 109.67571 * 359.97438 * 22 21 20 24 24 N 1.35485 * 107.30675 * 359.97438 * 23 22 21 25 25 C 1.52993 * 109.47133 * 59.99923 * 18 17 16 26 26 C 1.52999 * 109.46945 * 274.99699 * 14 13 11 27 27 C 1.37728 * 119.95893 * 180.31975 * 2 1 3 28 28 H 1.09000 * 109.47189 * 89.99992 * 1 2 3 29 29 H 1.09000 * 109.47526 * 210.00044 * 1 2 3 30 30 H 1.09005 * 109.47199 * 330.00799 * 1 2 3 31 31 H 0.96699 * 114.00288 * 269.98150 * 4 3 2 32 32 H 1.08994 * 109.47291 * 314.98332 * 6 5 3 33 33 H 0.96705 * 114.00077 * 300.00010 * 7 6 5 34 34 H 1.48499 * 110.00167 * 298.68507 * 8 6 5 35 35 H 1.48495 * 110.00144 * 60.00520 * 8 6 5 36 36 H 1.07993 * 120.04489 * 179.97438 * 9 5 3 37 37 H 0.96994 * 120.00311 * 0.02562 * 13 11 10 38 38 H 1.09010 * 109.47155 * 60.00112 * 16 14 13 39 39 H 1.09000 * 109.47377 * 299.99816 * 16 14 13 40 40 H 1.08995 * 109.47642 * 180.02562 * 17 16 14 41 41 H 1.08998 * 109.46973 * 59.99847 * 17 16 14 42 42 H 1.07998 * 126.34400 * 180.02562 * 23 22 21 43 43 H 0.96997 * 126.98100 * 180.02562 * 24 23 22 44 44 H 1.08998 * 109.47512 * 60.00022 * 25 18 17 45 45 H 1.09000 * 109.47078 * 179.97438 * 25 18 17 46 46 H 1.09002 * 109.47658 * 300.00325 * 26 14 13 47 47 H 1.09008 * 109.46835 * 60.00245 * 26 14 13 48 48 H 1.08006 * 120.04022 * 359.97438 * 27 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.2009 1.2040 0.0000 4 8 1.5197 2.3778 0.0005 5 6 3.5911 1.2094 0.0005 6 6 4.3386 2.5180 0.0011 7 8 4.2712 3.1044 1.3025 8 14 6.1201 2.2157 -0.4523 9 6 4.2859 0.0208 0.0005 10 6 3.5918 -1.1922 -0.0005 11 6 4.3327 -2.4687 0.0000 12 8 5.5486 -2.4659 0.0019 13 7 3.6615 -3.6375 -0.0005 14 6 4.3970 -4.9045 0.0006 15 1 5.3068 -4.7961 0.5911 16 6 3.5216 -6.0017 0.6095 17 6 4.2894 -7.3251 0.6101 18 6 4.6554 -7.7031 -0.8267 19 1 3.7454 -7.8113 -1.4169 20 6 5.4122 -9.0063 -0.8260 21 7 4.9056 -10.1952 -1.0093 22 7 5.8385 -11.0779 -0.9448 23 6 6.9827 -10.4922 -0.7180 24 7 6.7450 -9.1609 -0.6370 25 6 5.5307 -6.6059 -1.4354 26 6 4.7633 -5.2828 -1.4359 27 6 2.1947 -1.1932 -0.0067 28 1 -0.3633 0.0000 -1.0277 29 1 -0.3634 -0.8900 0.5138 30 1 -0.3634 0.8901 0.5137 31 1 1.3222 2.7184 -0.8827 32 1 3.8883 3.1940 -0.7257 33 1 3.3713 3.2897 1.6043 34 1 6.7542 1.3208 0.5489 35 1 6.2039 1.6060 -1.8037 36 1 5.3659 0.0257 0.0005 37 1 2.6916 -3.6397 -0.0016 38 1 2.6118 -6.1102 0.0189 39 1 3.2606 -5.7323 1.6329 40 1 3.6657 -8.1069 1.0434 41 1 5.1994 -7.2170 1.2003 42 1 7.9413 -10.9787 -0.6148 43 1 7.3965 -8.4606 -0.4759 44 1 6.4407 -6.4977 -0.8452 45 1 5.7918 -6.8754 -2.4588 46 1 3.8536 -5.3913 -2.0264 47 1 5.3870 -4.5011 -1.8696 48 1 1.6547 -2.1286 -0.0115 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16624780_13287732.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:34:38 Heat of formation + Delta-G solvation = -19.137867 kcal Electronic energy + Delta-G solvation = -31742.917494 eV Core-core repulsion = 27379.181599 eV Total energy + Delta-G solvation = -4363.735895 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 359.168 amu Computer time = 1.18 seconds Orbital eigenvalues (eV) -44.13853 -41.90648 -40.90649 -39.43579 -37.79860 -37.61809 -35.88819 -34.61630 -34.14004 -32.86320 -32.11880 -31.63536 -29.55812 -28.23684 -26.90889 -25.49737 -24.41025 -23.99981 -23.28734 -22.35052 -22.13152 -21.56176 -21.01093 -19.73086 -19.39519 -18.87502 -18.21624 -17.85924 -17.02376 -16.94941 -16.83895 -16.43731 -16.40286 -16.02763 -15.81678 -15.41438 -15.40468 -15.22163 -15.15804 -14.89016 -14.52205 -14.28142 -13.97278 -13.90752 -13.73831 -13.51606 -13.49679 -13.09599 -12.93705 -12.86535 -12.54975 -12.47183 -12.36346 -12.33125 -12.11900 -11.88671 -11.82771 -11.63991 -11.34598 -11.24378 -11.15181 -10.97325 -10.29521 -10.19360 -10.09804 -9.81893 -4.83858 -0.53525 -0.06060 0.79936 1.33182 1.52922 1.66690 1.74913 1.88408 1.91139 2.00879 2.46231 2.84426 3.04409 3.27453 3.31012 3.41476 3.43339 3.51341 3.63867 3.77715 3.78723 3.87830 3.90098 3.97280 3.99819 4.09710 4.11924 4.16112 4.18177 4.27201 4.31780 4.39568 4.43107 4.46410 4.48527 4.51379 4.58026 4.76612 4.79869 4.84599 4.85443 4.86241 4.94792 4.96142 5.03638 5.08488 5.10888 5.11145 5.27999 5.38787 6.02094 6.28190 6.32172 6.54368 7.02882 7.74554 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.115 4.115 2 C -0.111 4.111 3 C 0.145 3.855 4 O -0.490 6.490 5 C -0.142 4.142 6 C -0.073 4.073 7 O -0.532 6.532 8 Si 0.741 3.259 9 C -0.052 4.052 10 C -0.136 4.136 11 C 0.562 3.438 12 O -0.532 6.532 13 N -0.722 5.722 14 C 0.143 3.857 15 H 0.092 0.908 16 C -0.126 4.126 17 C -0.106 4.106 18 C -0.003 4.003 19 H 0.110 0.890 20 C 0.186 3.814 21 N -0.291 5.291 22 N -0.296 5.296 23 C 0.154 3.846 24 N -0.581 5.581 25 C -0.115 4.115 26 C -0.128 4.128 27 C -0.068 4.068 28 H 0.074 0.926 29 H 0.072 0.928 30 H 0.078 0.922 31 H 0.397 0.603 32 H 0.074 0.926 33 H 0.369 0.631 34 H -0.248 1.248 35 H -0.247 1.247 36 H 0.140 0.860 37 H 0.401 0.599 38 H 0.076 0.924 39 H 0.078 0.922 40 H 0.081 0.919 41 H 0.067 0.933 42 H 0.223 0.777 43 H 0.429 0.571 44 H 0.065 0.935 45 H 0.075 0.925 46 H 0.072 0.928 47 H 0.075 0.925 48 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.909 4.664 -1.532 5.268 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.171 4.171 2 C -0.112 4.112 3 C 0.100 3.900 4 O -0.302 6.302 5 C -0.143 4.143 6 C -0.182 4.182 7 O -0.338 6.338 8 Si 0.639 3.361 9 C -0.071 4.071 10 C -0.139 4.139 11 C 0.350 3.650 12 O -0.409 6.409 13 N -0.373 5.373 14 C 0.039 3.961 15 H 0.110 0.890 16 C -0.164 4.164 17 C -0.146 4.146 18 C -0.024 4.024 19 H 0.129 0.871 20 C -0.083 4.083 21 N -0.131 5.131 22 N -0.135 5.135 23 C -0.135 4.135 24 N -0.194 5.194 25 C -0.153 4.153 26 C -0.166 4.166 27 C -0.087 4.087 28 H 0.093 0.907 29 H 0.091 0.909 30 H 0.097 0.903 31 H 0.255 0.745 32 H 0.092 0.908 33 H 0.218 0.782 34 H -0.172 1.172 35 H -0.172 1.172 36 H 0.157 0.843 37 H 0.236 0.764 38 H 0.095 0.905 39 H 0.096 0.904 40 H 0.100 0.900 41 H 0.086 0.914 42 H 0.239 0.761 43 H 0.269 0.731 44 H 0.084 0.916 45 H 0.094 0.906 46 H 0.091 0.909 47 H 0.094 0.906 48 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges -0.890 2.696 -1.459 3.192 hybrid contribution -0.771 0.724 0.016 1.058 sum -1.661 3.420 -1.442 4.067 Atomic orbital electron populations 1.20749 0.89486 1.03981 1.02915 1.20200 0.97380 0.91994 1.01606 1.18303 0.88618 0.85391 0.97727 1.84708 1.75762 1.35722 1.33970 1.20686 0.93550 0.96428 1.03602 1.25170 1.13214 0.90945 0.88870 1.86736 1.32994 1.82538 1.31535 0.93205 0.76615 0.86819 0.79469 1.21007 1.00348 0.90489 0.95214 1.19850 0.93589 0.93414 1.07020 1.18131 0.87236 0.83612 0.76059 1.90810 1.13326 1.87498 1.49253 1.45950 1.10378 1.05374 1.75646 1.21078 0.96127 0.82015 0.96880 0.89005 1.21813 0.98822 0.93613 1.02142 1.21529 1.01136 0.97111 0.94776 1.19783 0.98097 0.85891 0.98633 0.87149 1.24846 0.81896 0.98334 1.03272 1.74304 1.24163 0.96141 1.18524 1.74307 0.96378 1.25410 1.17418 1.26590 1.02002 0.80778 1.04102 1.44137 1.09909 1.10103 1.55224 1.21590 0.98230 0.93804 1.01714 1.21892 1.01157 0.96871 0.96715 1.21111 0.92455 0.97959 0.97195 0.90731 0.90918 0.90290 0.74510 0.90797 0.78242 1.17237 1.17199 0.84258 0.76367 0.90525 0.90370 0.90047 0.91412 0.76091 0.73117 0.91648 0.90638 0.90925 0.90641 0.84814 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.33 9.78 36.00 0.35 0.68 16 2 C -0.11 0.10 5.89 -104.54 -0.62 -0.52 16 3 C 0.14 -0.02 6.62 -39.02 -0.26 -0.28 16 4 O -0.49 0.98 11.41 -18.83 -0.21 0.76 16 5 C -0.14 -0.20 5.27 -104.53 -0.55 -0.75 16 6 C -0.07 -0.03 2.33 36.01 0.08 0.05 16 7 O -0.53 -0.89 12.65 -35.23 -0.45 -1.34 16 8 Si 0.74 0.42 30.40 -169.99 -5.17 -4.74 16 9 C -0.05 -0.15 8.20 -39.22 -0.32 -0.47 16 10 C -0.14 -0.21 5.87 -104.96 -0.62 -0.83 16 11 C 0.56 1.24 7.73 -12.44 -0.10 1.14 16 12 O -0.53 -3.14 16.00 5.29 0.08 -3.06 16 13 N -0.72 0.98 5.03 -54.83 -0.28 0.70 16 14 C 0.14 -0.26 2.46 -67.93 -0.17 -0.42 16 15 H 0.09 0.00 7.58 -51.93 -0.39 -0.39 16 16 C -0.13 0.44 5.39 -26.73 -0.14 0.29 16 17 C -0.11 0.28 5.19 -26.73 -0.14 0.14 16 18 C 0.00 0.01 2.66 -91.77 -0.24 -0.24 16 19 H 0.11 -0.19 8.14 -51.93 -0.42 -0.62 16 20 C 0.19 0.14 6.99 -154.98 -1.08 -0.94 16 21 N -0.29 -1.40 12.21 32.80 0.40 -1.00 16 22 N -0.30 -1.40 12.21 29.69 0.36 -1.04 16 23 C 0.15 0.01 13.19 -89.95 -1.19 -1.18 16 24 N -0.58 0.89 5.96 -11.36 -0.07 0.82 16 25 C -0.11 0.31 4.97 -26.76 -0.13 0.18 16 26 C -0.13 0.25 5.49 -26.76 -0.15 0.11 16 27 C -0.07 0.07 9.18 -39.22 -0.36 -0.29 16 28 H 0.07 -0.28 8.14 -51.93 -0.42 -0.71 16 29 H 0.07 -0.27 8.09 -51.93 -0.42 -0.69 16 30 H 0.08 -0.18 7.52 -51.93 -0.39 -0.57 16 31 H 0.40 -2.40 9.06 45.56 0.41 -1.99 16 32 H 0.07 -0.13 7.82 -51.93 -0.41 -0.54 16 33 H 0.37 -0.11 8.59 45.56 0.39 0.28 16 34 H -0.25 -0.97 6.81 56.52 0.38 -0.58 16 35 H -0.25 -0.49 7.11 56.52 0.40 -0.09 16 36 H 0.14 0.59 4.51 -52.49 -0.24 0.35 16 37 H 0.40 -1.60 6.62 -40.82 -0.27 -1.87 16 38 H 0.08 -0.33 8.14 -51.92 -0.42 -0.76 16 39 H 0.08 -0.27 8.14 -51.93 -0.42 -0.69 16 40 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 41 H 0.07 -0.18 8.14 -51.93 -0.42 -0.60 16 42 H 0.22 -0.95 8.06 -52.49 -0.42 -1.37 16 43 H 0.43 -2.06 8.28 -40.82 -0.34 -2.39 16 44 H 0.06 -0.22 7.51 -51.93 -0.39 -0.61 16 45 H 0.07 -0.18 8.14 -51.93 -0.42 -0.60 16 46 H 0.07 -0.19 8.14 -51.93 -0.42 -0.61 16 47 H 0.07 0.00 8.14 -51.92 -0.42 -0.42 16 48 H 0.13 -0.55 6.39 -52.48 -0.34 -0.89 16 LS Contribution 390.29 15.07 5.88 5.88 Total: 0.00 -12.37 390.29 -10.89 -23.25 By element: Atomic # 1 Polarization: -11.10 SS G_CDS: -5.82 Total: -16.92 kcal Atomic # 6 Polarization: 2.31 SS G_CDS: -5.63 Total: -3.32 kcal Atomic # 7 Polarization: -0.94 SS G_CDS: 0.42 Total: -0.52 kcal Atomic # 8 Polarization: -3.06 SS G_CDS: -0.58 Total: -3.63 kcal Atomic # 14 Polarization: 0.42 SS G_CDS: -5.17 Total: -4.74 kcal Total LS contribution 5.88 Total: 5.88 kcal Total: -12.37 -10.89 -23.25 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16624780_13287732.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 4.115 kcal (2) G-P(sol) polarization free energy of solvation -12.367 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -8.252 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.886 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.252 kcal (6) G-S(sol) free energy of system = (1) + (5) -19.138 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.18 seconds