Wall clock time and date at job start Sun Mar 7 2021 05:34:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50694 * 1 3 3 C 1.38972 * 119.95791 * 2 1 4 4 O 1.35710 * 119.91351 * 0.02562 * 3 2 1 5 5 C 1.39023 * 120.17935 * 179.97438 * 3 2 1 6 6 C 1.50703 * 119.95531 * 180.02562 * 5 3 2 7 7 O 1.42898 * 109.46956 * 74.98372 * 6 5 3 8 8 Si 1.86301 * 109.46751 * 194.97947 * 6 5 3 9 9 C 1.37683 * 120.08646 * 0.02562 * 5 3 2 10 10 C 1.39752 * 119.91056 * 0.02562 * 9 5 3 11 11 C 1.47598 * 120.08597 * 180.02562 * 10 9 5 12 12 O 1.21582 * 120.00246 * 0.02562 * 11 10 9 13 13 N 1.34777 * 119.99936 * 179.97438 * 11 10 9 14 14 C 1.46505 * 119.99931 * 180.02562 * 13 11 10 15 15 H 1.08998 * 109.47277 * 34.99793 * 14 13 11 16 16 C 1.52998 * 109.46986 * 155.00001 * 14 13 11 17 17 C 1.52999 * 109.47201 * 179.97438 * 16 14 13 18 18 C 1.53008 * 109.46941 * 300.00317 * 17 16 14 19 19 H 1.08998 * 109.46904 * 299.99572 * 18 17 16 20 20 C 1.50704 * 109.46870 * 179.97438 * 18 17 16 21 21 N 1.30523 * 126.34835 * 95.02314 * 20 18 17 22 22 N 1.28592 * 109.67062 * 179.97438 * 21 20 18 23 23 C 1.30524 * 109.67571 * 359.97438 * 22 21 20 24 24 N 1.35485 * 107.30675 * 359.97438 * 23 22 21 25 25 C 1.52993 * 109.47133 * 59.99923 * 18 17 16 26 26 C 1.52999 * 109.46945 * 274.99699 * 14 13 11 27 27 C 1.37728 * 119.95893 * 180.31975 * 2 1 3 28 28 H 1.09000 * 109.47189 * 89.99992 * 1 2 3 29 29 H 1.09000 * 109.47526 * 210.00044 * 1 2 3 30 30 H 1.09005 * 109.47199 * 330.00799 * 1 2 3 31 31 H 0.96699 * 114.00288 * 269.98150 * 4 3 2 32 32 H 1.08994 * 109.47291 * 314.98332 * 6 5 3 33 33 H 0.96705 * 114.00077 * 300.00010 * 7 6 5 34 34 H 1.48499 * 110.00167 * 298.68507 * 8 6 5 35 35 H 1.48495 * 110.00144 * 60.00520 * 8 6 5 36 36 H 1.07993 * 120.04489 * 179.97438 * 9 5 3 37 37 H 0.96994 * 120.00311 * 0.02562 * 13 11 10 38 38 H 1.09010 * 109.47155 * 60.00112 * 16 14 13 39 39 H 1.09000 * 109.47377 * 299.99816 * 16 14 13 40 40 H 1.08995 * 109.47642 * 180.02562 * 17 16 14 41 41 H 1.08998 * 109.46973 * 59.99847 * 17 16 14 42 42 H 1.07998 * 126.34400 * 180.02562 * 23 22 21 43 43 H 0.96997 * 126.98100 * 180.02562 * 24 23 22 44 44 H 1.08998 * 109.47512 * 60.00022 * 25 18 17 45 45 H 1.09000 * 109.47078 * 179.97438 * 25 18 17 46 46 H 1.09002 * 109.47658 * 300.00325 * 26 14 13 47 47 H 1.09008 * 109.46835 * 60.00245 * 26 14 13 48 48 H 1.08006 * 120.04022 * 359.97438 * 27 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.2009 1.2040 0.0000 4 8 1.5197 2.3778 0.0005 5 6 3.5911 1.2094 0.0005 6 6 4.3386 2.5180 0.0011 7 8 4.2712 3.1044 1.3025 8 14 6.1201 2.2157 -0.4523 9 6 4.2859 0.0208 0.0005 10 6 3.5918 -1.1922 -0.0005 11 6 4.3327 -2.4687 0.0000 12 8 5.5486 -2.4659 0.0019 13 7 3.6615 -3.6375 -0.0005 14 6 4.3970 -4.9045 0.0006 15 1 5.3068 -4.7961 0.5911 16 6 3.5216 -6.0017 0.6095 17 6 4.2894 -7.3251 0.6101 18 6 4.6554 -7.7031 -0.8267 19 1 3.7454 -7.8113 -1.4169 20 6 5.4122 -9.0063 -0.8260 21 7 4.9056 -10.1952 -1.0093 22 7 5.8385 -11.0779 -0.9448 23 6 6.9827 -10.4922 -0.7180 24 7 6.7450 -9.1609 -0.6370 25 6 5.5307 -6.6059 -1.4354 26 6 4.7633 -5.2828 -1.4359 27 6 2.1947 -1.1932 -0.0067 28 1 -0.3633 0.0000 -1.0277 29 1 -0.3634 -0.8900 0.5138 30 1 -0.3634 0.8901 0.5137 31 1 1.3222 2.7184 -0.8827 32 1 3.8883 3.1940 -0.7257 33 1 3.3713 3.2897 1.6043 34 1 6.7542 1.3208 0.5489 35 1 6.2039 1.6060 -1.8037 36 1 5.3659 0.0257 0.0005 37 1 2.6916 -3.6397 -0.0016 38 1 2.6118 -6.1102 0.0189 39 1 3.2606 -5.7323 1.6329 40 1 3.6657 -8.1069 1.0434 41 1 5.1994 -7.2170 1.2003 42 1 7.9413 -10.9787 -0.6148 43 1 7.3965 -8.4606 -0.4759 44 1 6.4407 -6.4977 -0.8452 45 1 5.7918 -6.8754 -2.4588 46 1 3.8536 -5.3913 -2.0264 47 1 5.3870 -4.5011 -1.8696 48 1 1.6547 -2.1286 -0.0115 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16624780_13287732.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:34:36 Heat of formation + Delta-G solvation = -23.411348 kcal Electronic energy + Delta-G solvation = -31743.102806 eV Core-core repulsion = 27379.181599 eV Total energy + Delta-G solvation = -4363.921207 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 359.168 amu Computer time = 1.40 seconds Orbital eigenvalues (eV) -44.18320 -41.91722 -40.88087 -39.40419 -37.76592 -37.62794 -35.93059 -34.64595 -34.09010 -32.86823 -31.94566 -31.63550 -29.55250 -28.09268 -26.91688 -25.49145 -24.37541 -23.88701 -23.27877 -22.32627 -22.09701 -21.57567 -20.90959 -19.63903 -19.34556 -18.89006 -18.21242 -17.90058 -16.97955 -16.90705 -16.84928 -16.44634 -16.40156 -16.08803 -15.77891 -15.47738 -15.29735 -15.18215 -15.12015 -14.86334 -14.32915 -14.17136 -13.93545 -13.82002 -13.74628 -13.41246 -13.35403 -12.98045 -12.90076 -12.84753 -12.47118 -12.41292 -12.34869 -12.27258 -12.25611 -11.87563 -11.74016 -11.57182 -11.42359 -11.27833 -11.18369 -11.05667 -10.34216 -10.26369 -10.07241 -9.77692 -4.95377 -0.53912 -0.06389 0.82231 1.24283 1.46810 1.54574 1.81326 1.83975 1.89001 1.91907 2.43439 2.96344 3.11631 3.31103 3.41221 3.48314 3.54029 3.60034 3.76908 3.80789 3.92495 3.93686 4.00682 4.06250 4.15275 4.24311 4.25873 4.29666 4.34097 4.35029 4.39368 4.46254 4.50273 4.58242 4.63506 4.73035 4.78109 4.89992 4.92019 4.94934 4.99152 4.99748 5.01670 5.11506 5.13256 5.20109 5.21405 5.21918 5.36741 5.50917 6.19286 6.32696 6.58110 6.62649 6.98930 7.67031 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.111 4.111 2 C -0.113 4.113 3 C 0.153 3.847 4 O -0.491 6.491 5 C -0.156 4.156 6 C -0.073 4.073 7 O -0.547 6.547 8 Si 0.799 3.201 9 C -0.081 4.081 10 C -0.152 4.152 11 C 0.558 3.442 12 O -0.581 6.581 13 N -0.703 5.703 14 C 0.143 3.857 15 H 0.071 0.929 16 C -0.115 4.115 17 C -0.102 4.102 18 C 0.004 3.996 19 H 0.111 0.889 20 C 0.191 3.809 21 N -0.341 5.341 22 N -0.353 5.353 23 C 0.169 3.831 24 N -0.570 5.570 25 C -0.107 4.107 26 C -0.122 4.122 27 C -0.057 4.057 28 H 0.088 0.912 29 H 0.085 0.915 30 H 0.075 0.925 31 H 0.417 0.583 32 H 0.104 0.896 33 H 0.379 0.621 34 H -0.305 1.305 35 H -0.270 1.270 36 H 0.112 0.888 37 H 0.416 0.584 38 H 0.094 0.906 39 H 0.083 0.917 40 H 0.075 0.925 41 H 0.068 0.932 42 H 0.261 0.739 43 H 0.445 0.555 44 H 0.071 0.929 45 H 0.074 0.926 46 H 0.084 0.916 47 H 0.052 0.948 48 H 0.168 0.832 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.030 5.270 -1.674 6.842 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.168 4.168 2 C -0.113 4.113 3 C 0.107 3.893 4 O -0.305 6.305 5 C -0.157 4.157 6 C -0.182 4.182 7 O -0.354 6.354 8 Si 0.704 3.296 9 C -0.100 4.100 10 C -0.155 4.155 11 C 0.346 3.654 12 O -0.462 6.462 13 N -0.355 5.355 14 C 0.039 3.961 15 H 0.090 0.910 16 C -0.153 4.153 17 C -0.141 4.141 18 C -0.017 4.017 19 H 0.129 0.871 20 C -0.080 4.080 21 N -0.181 5.181 22 N -0.192 5.192 23 C -0.121 4.121 24 N -0.184 5.184 25 C -0.146 4.146 26 C -0.161 4.161 27 C -0.075 4.075 28 H 0.107 0.893 29 H 0.104 0.896 30 H 0.094 0.906 31 H 0.278 0.722 32 H 0.122 0.878 33 H 0.228 0.772 34 H -0.234 1.234 35 H -0.196 1.196 36 H 0.129 0.871 37 H 0.255 0.745 38 H 0.113 0.887 39 H 0.102 0.898 40 H 0.094 0.906 41 H 0.086 0.914 42 H 0.277 0.723 43 H 0.288 0.712 44 H 0.090 0.910 45 H 0.093 0.907 46 H 0.103 0.897 47 H 0.071 0.929 48 H 0.185 0.815 Dipole moment (debyes) X Y Z Total from point charges -3.058 3.324 -1.622 4.799 hybrid contribution -0.085 0.515 0.080 0.528 sum -3.143 3.839 -1.542 5.196 Atomic orbital electron populations 1.20795 0.87555 1.04470 1.03949 1.20524 0.98655 0.91578 1.00587 1.18324 0.87975 0.86426 0.96545 1.84665 1.75190 1.34971 1.35704 1.20762 0.94551 0.95953 1.04453 1.25122 1.12508 0.91396 0.89208 1.86700 1.33958 1.82622 1.32149 0.92759 0.75834 0.84979 0.76017 1.20982 0.99359 0.92174 0.97483 1.19879 0.94815 0.92488 1.08318 1.18365 0.86752 0.84712 0.75529 1.90781 1.15436 1.88170 1.51843 1.45829 1.11138 1.04565 1.73962 1.21101 0.95879 0.82230 0.96876 0.91039 1.21746 0.98822 0.92120 1.02640 1.21478 1.01211 0.97278 0.94129 1.19819 0.97905 0.84810 0.99187 0.87057 1.25191 0.82745 0.98164 1.01858 1.74185 1.25516 0.97563 1.20817 1.74193 0.97955 1.26881 1.20179 1.27292 1.02225 0.81127 1.01499 1.44107 1.09595 1.10265 1.54464 1.21520 0.98287 0.93049 1.01745 1.21815 1.01338 0.96397 0.96511 1.21422 0.91156 0.99577 0.95377 0.89300 0.89631 0.90630 0.72176 0.87824 0.77196 1.23406 1.19638 0.87075 0.74513 0.88733 0.89790 0.90616 0.91367 0.72329 0.71217 0.90995 0.90731 0.89697 0.92876 0.81459 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.95 9.78 71.23 0.70 1.65 16 2 C -0.11 0.40 5.89 -19.81 -0.12 0.28 16 3 C 0.15 -0.20 6.62 22.63 0.15 -0.05 16 4 O -0.49 2.90 11.41 -90.31 -1.03 1.87 16 5 C -0.16 -0.54 5.27 -19.81 -0.10 -0.64 16 6 C -0.07 -0.10 2.33 71.24 0.17 0.07 16 7 O -0.55 -2.00 12.65 -148.98 -1.89 -3.89 16 8 Si 0.80 2.89 30.40 68.60 2.09 4.98 16 9 C -0.08 -0.66 8.20 22.50 0.18 -0.47 16 10 C -0.15 -0.63 5.87 -20.09 -0.12 -0.74 16 11 C 0.56 3.35 7.73 86.71 0.67 4.02 16 12 O -0.58 -8.79 16.00 -3.97 -0.06 -8.86 16 13 N -0.70 1.96 5.03 -445.64 -2.24 -0.29 16 14 C 0.14 -0.49 2.46 44.99 0.11 -0.38 16 15 H 0.07 0.10 7.58 -2.39 -0.02 0.08 16 16 C -0.12 0.92 5.39 30.59 0.16 1.08 16 17 C -0.10 0.57 5.19 30.60 0.16 0.73 16 18 C 0.00 -0.01 2.66 -11.54 -0.03 -0.05 16 19 H 0.11 -0.43 8.14 -2.39 -0.02 -0.45 16 20 C 0.19 0.35 6.99 137.98 0.96 1.32 16 21 N -0.34 -3.68 12.21 -50.15 -0.61 -4.30 16 22 N -0.35 -3.71 12.21 -59.99 -0.73 -4.45 16 23 C 0.17 -0.03 13.19 180.11 2.37 2.35 16 24 N -0.57 1.89 5.96 -189.86 -1.13 0.76 16 25 C -0.11 0.58 4.97 30.58 0.15 0.73 16 26 C -0.12 0.45 5.49 30.58 0.17 0.62 16 27 C -0.06 0.19 9.18 22.50 0.21 0.40 16 28 H 0.09 -0.97 8.14 -2.39 -0.02 -0.99 16 29 H 0.08 -0.91 8.09 -2.39 -0.02 -0.93 16 30 H 0.07 -0.54 7.52 -2.38 -0.02 -0.56 16 31 H 0.42 -6.05 9.06 -74.06 -0.67 -6.72 16 32 H 0.10 -0.48 7.82 -2.39 -0.02 -0.50 16 33 H 0.38 -0.38 8.59 -74.05 -0.64 -1.01 16 34 H -0.31 -3.98 6.81 99.48 0.68 -3.30 16 35 H -0.27 -1.85 7.11 99.48 0.71 -1.14 16 36 H 0.11 1.45 4.51 -2.91 -0.01 1.44 16 37 H 0.42 -4.00 6.62 -92.71 -0.61 -4.61 16 38 H 0.09 -1.04 8.14 -2.38 -0.02 -1.05 16 39 H 0.08 -0.70 8.14 -2.39 -0.02 -0.71 16 40 H 0.08 -0.28 8.14 -2.39 -0.02 -0.30 16 41 H 0.07 -0.37 8.14 -2.39 -0.02 -0.39 16 42 H 0.26 -2.60 8.06 -2.91 -0.02 -2.62 16 43 H 0.44 -4.57 8.28 -92.71 -0.77 -5.34 16 44 H 0.07 -0.47 7.51 -2.39 -0.02 -0.49 16 45 H 0.07 -0.35 8.14 -2.39 -0.02 -0.37 16 46 H 0.08 -0.51 8.14 -2.39 -0.02 -0.53 16 47 H 0.05 0.09 8.14 -2.38 -0.02 0.07 16 48 H 0.17 -1.87 6.39 -2.91 -0.02 -1.88 16 Total: 0.00 -34.14 390.29 -1.44 -35.58 By element: Atomic # 1 Polarization: -30.70 SS G_CDS: -1.63 Total: -32.33 kcal Atomic # 6 Polarization: 5.11 SS G_CDS: 5.80 Total: 10.91 kcal Atomic # 7 Polarization: -3.55 SS G_CDS: -4.72 Total: -8.26 kcal Atomic # 8 Polarization: -7.90 SS G_CDS: -2.98 Total: -10.87 kcal Atomic # 14 Polarization: 2.89 SS G_CDS: 2.09 Total: 4.98 kcal Total: -34.14 -1.44 -35.58 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16624780_13287732.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 12.164 kcal (2) G-P(sol) polarization free energy of solvation -34.135 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -21.971 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.440 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.575 kcal (6) G-S(sol) free energy of system = (1) + (5) -23.411 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.40 seconds