Wall clock time and date at job start Sun Mar 7 2021 05:34:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50692 * 1 3 3 C 1.36425 * 125.80033 * 2 1 4 4 C 1.47373 * 127.19106 * 359.97438 * 3 2 1 5 5 O 1.21611 * 120.00037 * 359.70903 * 4 3 2 6 6 N 1.34781 * 119.99952 * 179.70760 * 4 3 2 7 7 C 1.46499 * 119.99874 * 179.97438 * 6 4 3 8 8 H 1.09002 * 109.47391 * 325.00213 * 7 6 4 9 9 C 1.53000 * 109.46840 * 85.00543 * 7 6 4 10 10 C 1.53001 * 109.46886 * 180.02562 * 9 7 6 11 11 C 1.53002 * 109.46963 * 299.99499 * 10 9 7 12 12 H 1.09002 * 109.47067 * 300.00341 * 11 10 9 13 13 C 1.50703 * 109.47292 * 180.02562 * 11 10 9 14 14 N 1.30513 * 126.34599 * 144.69179 * 13 11 10 15 15 N 1.28599 * 109.67416 * 179.82461 * 14 13 11 16 16 C 1.30526 * 109.66668 * 0.44629 * 15 14 13 17 17 N 1.35491 * 107.31081 * 359.73063 * 16 15 14 18 18 C 1.52997 * 109.47092 * 60.00194 * 11 10 9 19 19 C 1.53002 * 109.46799 * 205.00309 * 7 6 4 20 20 C 1.47022 * 105.61354 * 179.73450 * 3 2 1 21 21 C 1.34176 * 105.95632 * 0.26379 * 20 3 2 22 22 C 1.50697 * 125.43886 * 179.97438 * 21 20 3 23 23 O 1.42903 * 109.47318 * 299.99594 * 22 21 20 24 24 Si 1.86297 * 109.47292 * 179.97438 * 22 21 20 25 25 O 1.33657 * 125.80611 * 180.18814 * 2 1 3 26 26 H 1.09000 * 109.47280 * 90.00237 * 1 2 3 27 27 H 1.09003 * 109.47134 * 209.99833 * 1 2 3 28 28 H 1.09000 * 109.47072 * 330.00082 * 1 2 3 29 29 H 0.97002 * 119.99716 * 0.02562 * 6 4 3 30 30 H 1.09001 * 109.47194 * 299.99493 * 9 7 6 31 31 H 1.08992 * 109.47399 * 59.99666 * 9 7 6 32 32 H 1.09000 * 109.47437 * 180.02562 * 10 9 7 33 33 H 1.09002 * 109.47508 * 59.99571 * 10 9 7 34 34 H 1.08000 * 126.33980 * 179.73243 * 16 15 14 35 35 H 0.96994 * 126.98108 * 180.02562 * 17 16 15 36 36 H 1.09001 * 109.47375 * 180.02562 * 18 11 10 37 37 H 1.09002 * 109.47497 * 59.99850 * 18 11 10 38 38 H 1.09002 * 109.47075 * 299.99543 * 19 7 6 39 39 H 1.08996 * 109.47407 * 60.00500 * 19 7 6 40 40 H 1.08001 * 127.02438 * 180.27761 * 20 3 2 41 41 H 1.09000 * 109.47220 * 59.99949 * 22 21 20 42 42 H 0.96696 * 114.00241 * 179.97438 * 23 22 21 43 43 H 1.48500 * 110.00361 * 298.67893 * 24 22 21 44 44 H 1.48505 * 109.99917 * 60.00076 * 24 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.3050 1.1065 0.0000 4 6 1.8739 2.5158 -0.0005 5 8 0.6889 2.7892 -0.0064 6 7 2.7929 3.5016 0.0055 7 6 2.3644 4.9025 0.0044 8 1 1.4564 5.0043 -0.5900 9 6 2.0871 5.3521 1.4404 10 6 1.6389 6.8150 1.4392 11 6 2.7429 7.6861 0.8363 12 1 3.6510 7.5847 1.4305 13 6 2.3017 9.1271 0.8356 14 7 3.0633 10.1692 1.0289 15 7 2.3566 11.2412 0.9568 16 6 1.1104 10.9310 0.7237 17 7 1.0400 9.5805 0.6401 18 6 3.0202 7.2365 -0.5996 19 6 3.4687 5.7731 -0.5984 20 6 3.6848 0.5992 0.0066 21 6 3.5859 -0.7389 0.0039 22 6 4.7459 -1.7009 0.0080 23 8 5.5482 -1.4846 -1.1546 24 14 4.1027 -3.4494 0.0027 25 8 2.2889 -1.0840 -0.0036 26 1 -0.3634 0.0000 -1.0277 27 1 -0.3633 -0.8900 0.5138 28 1 -0.3633 0.8900 0.5138 29 1 3.7381 3.2835 0.0098 30 1 1.3003 4.7318 1.8698 31 1 2.9950 5.2503 2.0347 32 1 1.4418 7.1355 2.4622 33 1 0.7308 6.9163 0.8449 34 1 0.2878 11.6227 0.6171 35 1 0.2474 9.0467 0.4737 36 1 3.8070 7.8567 -1.0290 37 1 2.1121 7.3378 -1.1940 38 1 4.3767 5.6714 -0.0039 39 1 3.6663 5.4529 -1.6213 40 1 4.5928 1.1840 0.0126 41 1 5.3492 -1.5388 0.9012 42 1 6.3151 -2.0702 -1.2177 43 1 3.2932 -3.6965 1.2229 44 1 3.2781 -3.6836 -1.2099 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16624780_13308374.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:34:51 Heat of formation + Delta-G solvation = 17.121547 kcal Electronic energy + Delta-G solvation = -28213.739037 eV Core-core repulsion = 24135.339228 eV Total energy + Delta-G solvation = -4078.399810 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 333.152 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -44.11127 -43.78406 -40.98363 -39.25426 -38.05263 -35.75698 -34.59134 -34.17106 -33.27640 -32.30284 -32.05598 -29.93933 -29.21957 -26.02196 -24.92469 -24.26650 -23.84459 -23.26450 -22.33325 -21.74812 -21.35442 -20.42121 -19.36172 -18.84676 -18.39456 -17.43913 -17.34139 -17.04848 -16.78971 -16.39040 -16.25609 -15.88608 -15.82081 -15.65961 -15.23920 -15.07515 -14.75755 -14.37775 -14.23387 -14.12961 -13.98953 -13.93895 -13.79221 -13.44608 -13.15825 -12.81688 -12.61101 -12.50114 -12.41861 -12.31215 -12.13591 -11.83233 -11.79666 -11.58405 -11.29672 -10.98155 -10.90258 -10.60405 -10.17773 -10.12420 -9.57351 -5.17214 0.25495 0.78931 0.82644 1.06839 1.43451 1.60265 1.78021 1.93711 1.95139 2.08632 2.32214 3.08518 3.14953 3.37720 3.45728 3.49236 3.67832 3.69755 3.73119 3.81522 3.96059 4.03246 4.06196 4.13092 4.16108 4.19569 4.22491 4.35297 4.36696 4.47449 4.49342 4.51063 4.59013 4.63597 4.75831 4.82693 4.86078 4.90376 4.92415 5.05283 5.08453 5.12868 5.16266 5.18916 5.43211 5.89184 6.04747 6.36348 6.45408 7.19300 7.77155 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 C 0.094 3.906 3 C -0.252 4.252 4 C 0.596 3.404 5 O -0.539 6.539 6 N -0.720 5.720 7 C 0.145 3.855 8 H 0.091 0.909 9 C -0.127 4.127 10 C -0.114 4.114 11 C -0.004 4.004 12 H 0.110 0.890 13 C 0.186 3.814 14 N -0.291 5.291 15 N -0.296 5.296 16 C 0.154 3.846 17 N -0.581 5.581 18 C -0.106 4.106 19 C -0.126 4.126 20 C -0.142 4.142 21 C -0.014 4.014 22 C -0.035 4.035 23 O -0.543 6.543 24 Si 0.709 3.291 25 O -0.176 6.176 26 H 0.093 0.907 27 H 0.080 0.920 28 H 0.112 0.888 29 H 0.402 0.598 30 H 0.075 0.925 31 H 0.071 0.929 32 H 0.074 0.926 33 H 0.065 0.935 34 H 0.223 0.777 35 H 0.429 0.571 36 H 0.080 0.920 37 H 0.067 0.933 38 H 0.076 0.924 39 H 0.077 0.923 40 H 0.160 0.840 41 H 0.095 0.905 42 H 0.391 0.609 43 H -0.252 1.252 44 H -0.250 1.250 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.323 -5.481 0.103 5.639 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.142 4.142 2 C 0.041 3.959 3 C -0.257 4.257 4 C 0.385 3.615 5 O -0.418 6.418 6 N -0.371 5.371 7 C 0.041 3.959 8 H 0.109 0.891 9 C -0.166 4.166 10 C -0.153 4.153 11 C -0.024 4.024 12 H 0.128 0.872 13 C -0.083 4.083 14 N -0.132 5.132 15 N -0.135 5.135 16 C -0.135 4.135 17 N -0.194 5.194 18 C -0.145 4.145 19 C -0.164 4.164 20 C -0.161 4.161 21 C -0.062 4.062 22 C -0.144 4.144 23 O -0.351 6.351 24 Si 0.608 3.392 25 O -0.074 6.074 26 H 0.111 0.889 27 H 0.099 0.901 28 H 0.130 0.870 29 H 0.236 0.764 30 H 0.094 0.906 31 H 0.090 0.910 32 H 0.093 0.907 33 H 0.083 0.917 34 H 0.239 0.761 35 H 0.269 0.731 36 H 0.099 0.901 37 H 0.086 0.914 38 H 0.094 0.906 39 H 0.096 0.904 40 H 0.178 0.822 41 H 0.113 0.887 42 H 0.241 0.759 43 H -0.177 1.177 44 H -0.174 1.174 Dipole moment (debyes) X Y Z Total from point charges 0.602 -4.663 0.279 4.710 hybrid contribution -1.105 -0.246 -0.243 1.158 sum -0.504 -4.909 0.036 4.934 Atomic orbital electron populations 1.20703 0.83293 1.05390 1.04805 1.22942 0.94056 0.82802 0.96147 1.21122 0.93178 0.93812 1.17565 1.17120 0.85410 0.83613 0.75378 1.90766 1.16503 1.83975 1.50578 1.45821 1.09814 1.05703 1.75764 1.21036 0.98697 0.79430 0.96744 0.89111 1.21899 1.02614 0.95239 0.96844 1.21601 0.97384 0.94669 1.01647 1.19789 1.00355 0.83590 0.98704 0.87165 1.24861 0.81638 0.98672 1.03104 1.74303 1.26206 0.94128 1.18526 1.74310 1.00849 1.20965 1.17399 1.26586 0.99583 0.83204 1.04163 1.44136 1.11341 1.08744 1.55163 1.21535 1.02619 0.95638 0.94725 1.21822 0.98268 0.94135 1.02188 1.22537 0.96438 0.93231 1.03909 1.21048 0.82087 0.94259 1.08803 1.23760 0.90925 1.08019 0.91728 1.86447 1.42631 1.64016 1.41995 0.95247 0.85154 0.77259 0.81559 1.83692 1.16477 1.35390 1.71793 0.88897 0.90125 0.86962 0.76368 0.90640 0.90994 0.90714 0.91671 0.76110 0.73125 0.90120 0.91447 0.90553 0.90414 0.82207 0.88696 0.75927 1.17652 1.17388 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.07 9.88 36.00 0.36 0.29 16 2 C 0.09 0.28 7.37 -34.97 -0.26 0.02 16 3 C -0.25 -0.66 6.31 -103.27 -0.65 -1.31 16 4 C 0.60 1.50 7.78 -12.54 -0.10 1.40 16 5 O -0.54 -2.65 14.51 5.27 0.08 -2.57 16 6 N -0.72 0.39 5.07 -54.90 -0.28 0.12 16 7 C 0.15 -0.21 2.45 -67.93 -0.17 -0.37 16 8 H 0.09 0.01 7.58 -51.93 -0.39 -0.38 16 9 C -0.13 0.22 5.49 -26.73 -0.15 0.07 16 10 C -0.11 0.29 4.97 -26.73 -0.13 0.16 16 11 C 0.00 0.01 2.66 -91.77 -0.24 -0.24 16 12 H 0.11 -0.15 8.14 -51.93 -0.42 -0.58 16 13 C 0.19 0.18 6.99 -154.99 -1.08 -0.91 16 14 N -0.29 -1.46 12.21 32.80 0.40 -1.06 16 15 N -0.30 -1.44 12.21 29.69 0.36 -1.08 16 16 C 0.15 0.02 13.19 -89.94 -1.19 -1.16 16 17 N -0.58 0.82 5.96 -11.36 -0.07 0.75 16 18 C -0.11 0.24 5.19 -26.70 -0.14 0.11 16 19 C -0.13 0.37 5.40 -26.70 -0.14 0.22 16 20 C -0.14 -0.19 10.46 -37.45 -0.39 -0.58 16 21 C -0.01 -0.03 6.24 -35.74 -0.22 -0.25 16 22 C -0.03 0.04 2.96 36.00 0.11 0.15 16 23 O -0.54 0.76 12.84 -35.23 -0.45 0.31 16 24 Si 0.71 -1.07 32.09 -169.99 -5.45 -6.52 16 25 O -0.18 -0.63 8.89 7.64 0.07 -0.56 16 26 H 0.09 0.01 8.14 -51.93 -0.42 -0.42 16 27 H 0.08 -0.05 8.14 -51.93 -0.42 -0.48 16 28 H 0.11 0.16 6.49 -51.93 -0.34 -0.18 16 29 H 0.40 -1.01 7.77 -40.82 -0.32 -1.33 16 30 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 31 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 32 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 33 H 0.06 -0.21 7.52 -51.93 -0.39 -0.60 16 34 H 0.22 -0.93 8.06 -52.49 -0.42 -1.35 16 35 H 0.43 -2.03 8.29 -40.82 -0.34 -2.37 16 36 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 37 H 0.07 -0.16 8.14 -51.93 -0.42 -0.59 16 38 H 0.08 -0.28 8.14 -51.93 -0.42 -0.70 16 39 H 0.08 -0.21 8.14 -51.93 -0.42 -0.64 16 40 H 0.16 -0.21 7.74 -52.49 -0.41 -0.61 16 41 H 0.10 -0.35 7.96 -51.93 -0.41 -0.77 16 42 H 0.39 -2.65 8.74 45.56 0.40 -2.26 16 43 H -0.25 -0.37 7.11 56.52 0.40 0.03 16 44 H -0.25 -0.63 7.11 56.52 0.40 -0.23 16 LS Contribution 366.91 15.07 5.53 5.53 Total: 0.00 -12.76 366.91 -10.26 -23.02 By element: Atomic # 1 Polarization: -9.48 SS G_CDS: -6.05 Total: -15.53 kcal Atomic # 6 Polarization: 1.99 SS G_CDS: -4.40 Total: -2.41 kcal Atomic # 7 Polarization: -1.69 SS G_CDS: 0.42 Total: -1.27 kcal Atomic # 8 Polarization: -2.51 SS G_CDS: -0.31 Total: -2.82 kcal Atomic # 14 Polarization: -1.07 SS G_CDS: -5.45 Total: -6.52 kcal Total LS contribution 5.53 Total: 5.53 kcal Total: -12.76 -10.26 -23.02 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16624780_13308374.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 40.145 kcal (2) G-P(sol) polarization free energy of solvation -12.760 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 27.385 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.263 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.023 kcal (6) G-S(sol) free energy of system = (1) + (5) 17.122 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds