Wall clock time and date at job start Sun Mar 7 2021 05:35:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86301 * 109.47361 * 2 1 4 4 C 1.50703 * 109.47069 * 120.00062 * 2 1 3 5 5 C 1.38508 * 119.80292 * 244.99817 * 4 2 1 6 6 C 1.37828 * 120.29819 * 180.27880 * 5 4 2 7 7 C 1.39671 * 119.90680 * 359.44526 * 6 5 4 8 8 C 1.47540 * 120.19000 * 180.27370 * 7 6 5 9 9 O 1.21589 * 119.99595 * 180.29510 * 8 7 6 10 10 N 1.34777 * 120.00136 * 0.30378 * 8 7 6 11 11 C 1.46502 * 119.99734 * 179.97438 * 10 8 7 12 12 H 1.08998 * 109.47357 * 34.99251 * 11 10 8 13 13 C 1.53004 * 109.46716 * 154.99768 * 11 10 8 14 14 C 1.52995 * 109.46683 * 179.97438 * 13 11 10 15 15 C 1.53006 * 109.47440 * 299.99987 * 14 13 11 16 16 H 1.09006 * 109.46462 * 299.99860 * 15 14 13 17 17 C 1.50697 * 109.47244 * 180.02562 * 15 14 13 18 18 N 1.30527 * 126.34423 * 94.68765 * 17 15 14 19 19 N 1.28602 * 109.66746 * 179.81959 * 18 17 15 20 20 C 1.30519 * 109.67514 * 0.45302 * 19 18 17 21 21 N 1.35490 * 126.34833 * 274.99834 * 17 15 14 22 22 C 1.52998 * 109.47157 * 59.99989 * 15 14 13 23 23 C 1.53001 * 109.46633 * 274.99422 * 11 10 8 24 24 C 1.40174 * 119.61760 * 0.57295 * 7 6 5 25 25 O 1.35653 * 120.14934 * 179.67969 * 24 7 6 26 26 C 1.38093 * 119.80534 * 65.01981 * 4 2 1 27 27 H 0.96700 * 113.99545 * 300.00626 * 1 2 3 28 28 H 1.09001 * 109.47203 * 239.99996 * 2 1 3 29 29 H 1.48502 * 109.99629 * 299.99828 * 3 2 1 30 30 H 1.48494 * 110.00079 * 61.32053 * 3 2 1 31 31 H 1.08002 * 119.84813 * 359.97438 * 5 4 2 32 32 H 1.08000 * 120.04778 * 179.72394 * 6 5 4 33 33 H 0.96997 * 119.99972 * 359.97438 * 10 8 7 34 34 H 1.08994 * 109.46755 * 299.99144 * 13 11 10 35 35 H 1.09003 * 109.46927 * 59.99596 * 13 11 10 36 36 H 1.08997 * 109.47563 * 59.99846 * 14 13 11 37 37 H 1.09001 * 109.47077 * 180.02562 * 14 13 11 38 38 H 1.07995 * 126.34477 * 179.72693 * 20 19 18 39 39 H 0.97001 * 126.97781 * 359.97438 * 21 17 15 40 40 H 1.08998 * 109.47372 * 60.00285 * 22 15 14 41 41 H 1.08997 * 109.47020 * 180.02562 * 22 15 14 42 42 H 1.08998 * 109.47110 * 299.99981 * 23 11 10 43 43 H 1.08997 * 109.47692 * 60.00496 * 23 11 10 44 44 H 0.96704 * 114.00377 * 270.01899 * 25 24 7 45 45 H 1.08002 * 119.96291 * 359.97438 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.6397 -0.0070 2.1906 6 6 3.1088 -0.6477 3.3171 7 6 2.8594 -2.0100 3.4981 8 6 3.3534 -2.7009 4.7045 9 8 3.1390 -3.8881 4.8559 10 7 4.0423 -2.0159 5.6388 11 6 4.5323 -2.7019 6.8370 12 1 4.8233 -3.7202 6.5793 13 6 5.7431 -1.9511 7.3951 14 6 6.2544 -2.6671 8.6467 15 6 5.1467 -2.7042 9.7016 16 1 4.8559 -1.6856 9.9589 17 6 5.6506 -3.4089 10.9346 18 7 6.1694 -2.8440 11.9908 19 7 6.4865 -3.7451 12.8518 20 6 6.1934 -4.9262 12.3801 21 7 5.6545 -4.7465 11.1500 22 6 3.9359 -3.4549 9.1435 23 6 3.4248 -2.7393 7.8919 24 6 2.1425 -2.7185 2.5239 25 8 1.8998 -4.0433 2.6856 26 6 1.6830 -2.0590 1.3939 27 1 -0.3932 0.4418 0.7650 28 1 1.7923 -0.5138 -0.8900 29 1 1.5616 2.4678 -1.2086 30 1 1.5880 2.4585 1.2242 31 1 2.8296 1.0473 2.0535 32 1 3.6645 -0.0962 4.0610 33 1 4.2136 -1.0689 5.5179 34 1 6.5320 -1.9245 6.6435 35 1 5.4520 -0.9328 7.6527 36 1 6.5453 -3.6856 8.3895 37 1 7.1167 -2.1321 9.0446 38 1 6.3511 -5.8714 12.8780 39 1 5.3359 -5.4357 10.5463 40 1 4.2268 -4.4733 8.8862 41 1 3.1467 -3.4809 9.8947 42 1 3.1338 -1.7210 8.1496 43 1 2.5622 -3.2741 7.4944 44 1 2.5845 -4.6168 2.3149 45 1 1.1299 -2.6008 0.6409 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16624780_13422076.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:35:00 Heat of formation + Delta-G solvation = -8.085445 kcal Electronic energy + Delta-G solvation = -29542.394011 eV Core-core repulsion = 25334.675004 eV Total energy + Delta-G solvation = -4207.719007 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.152 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -44.12073 -41.76504 -40.54644 -39.21925 -38.43161 -37.26978 -35.71906 -34.58589 -33.28599 -32.08621 -32.03724 -31.17613 -29.65229 -27.49949 -24.92342 -24.25234 -24.01061 -23.58903 -23.08139 -22.17208 -21.52877 -21.12575 -19.51591 -19.37169 -18.74153 -18.35651 -17.64754 -16.85159 -16.78648 -16.58775 -16.39933 -16.33398 -16.19339 -16.00128 -15.73128 -15.39265 -15.18733 -15.12042 -14.89949 -14.48083 -14.16188 -13.87382 -13.77800 -13.47985 -13.36667 -12.96552 -12.83808 -12.52882 -12.45630 -12.43598 -12.33042 -12.13849 -11.85080 -11.81166 -11.66898 -11.59780 -11.30275 -10.90632 -10.68739 -10.26344 -10.17950 -10.10522 -9.86079 -5.09633 -0.47410 0.04115 0.81623 1.11477 1.45870 1.69753 1.76830 1.84769 1.92719 1.96064 2.51057 3.04067 3.07280 3.22416 3.32349 3.40278 3.47032 3.54817 3.63662 3.70018 3.79498 3.90636 3.94709 4.01110 4.13290 4.14419 4.17211 4.20163 4.31006 4.33830 4.45828 4.48383 4.51303 4.60811 4.62925 4.79755 4.82768 4.88282 4.89249 4.90398 5.02526 5.07729 5.12401 5.13656 5.14266 5.36892 5.46701 6.03779 6.24877 6.37181 6.64599 7.14734 7.76120 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.526 6.526 2 C -0.081 4.081 3 Si 0.690 3.310 4 C -0.074 4.074 5 C -0.137 4.137 6 C -0.065 4.065 7 C -0.165 4.165 8 C 0.560 3.440 9 O -0.518 6.518 10 N -0.726 5.726 11 C 0.145 3.855 12 H 0.091 0.909 13 C -0.126 4.126 14 C -0.106 4.106 15 C -0.003 4.003 16 H 0.110 0.890 17 C 0.186 3.814 18 N -0.291 5.291 19 N -0.296 5.296 20 C 0.154 3.846 21 N -0.581 5.581 22 C -0.114 4.114 23 C -0.128 4.128 24 C 0.173 3.827 25 O -0.476 6.476 26 C -0.129 4.129 27 H 0.378 0.622 28 H 0.123 0.877 29 H -0.255 1.255 30 H -0.258 1.258 31 H 0.136 0.864 32 H 0.134 0.866 33 H 0.399 0.601 34 H 0.077 0.923 35 H 0.076 0.924 36 H 0.067 0.933 37 H 0.080 0.920 38 H 0.223 0.777 39 H 0.429 0.571 40 H 0.065 0.935 41 H 0.074 0.926 42 H 0.071 0.929 43 H 0.075 0.925 44 H 0.398 0.602 45 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.868 0.673 -3.933 4.914 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.332 6.332 2 C -0.191 4.191 3 Si 0.591 3.409 4 C -0.075 4.075 5 C -0.155 4.155 6 C -0.083 4.083 7 C -0.169 4.169 8 C 0.348 3.652 9 O -0.394 6.394 10 N -0.378 5.378 11 C 0.041 3.959 12 H 0.109 0.891 13 C -0.164 4.164 14 C -0.145 4.145 15 C -0.024 4.024 16 H 0.128 0.872 17 C -0.083 4.083 18 N -0.132 5.132 19 N -0.135 5.135 20 C -0.135 4.135 21 N -0.194 5.194 22 C -0.153 4.153 23 C -0.167 4.167 24 C 0.126 3.874 25 O -0.288 6.288 26 C -0.147 4.147 27 H 0.226 0.774 28 H 0.141 0.859 29 H -0.180 1.180 30 H -0.183 1.183 31 H 0.154 0.846 32 H 0.152 0.848 33 H 0.235 0.765 34 H 0.096 0.904 35 H 0.094 0.906 36 H 0.086 0.914 37 H 0.099 0.901 38 H 0.239 0.761 39 H 0.269 0.731 40 H 0.083 0.917 41 H 0.093 0.907 42 H 0.090 0.910 43 H 0.094 0.906 44 H 0.256 0.744 45 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges 2.659 1.689 -3.008 4.356 hybrid contribution -1.233 -1.447 -0.750 2.044 sum 1.427 0.242 -3.758 4.027 Atomic orbital electron populations 1.86636 1.17264 1.79975 1.49362 1.25161 0.84325 1.11361 0.98214 0.94957 0.91458 0.74012 0.80460 1.20392 0.96765 0.94010 0.96286 1.21007 0.99931 1.00211 0.94324 1.21150 0.97367 0.92615 0.97217 1.20425 1.03981 0.95036 0.97417 1.18046 0.77985 0.86705 0.82509 1.90831 1.55917 1.14727 1.77878 1.45977 1.57217 1.13330 1.21276 1.21027 0.93255 0.97734 0.83864 0.89119 1.21811 0.97174 0.99926 0.97470 1.21527 0.97626 1.01705 0.93684 1.19788 0.95227 0.99837 0.87575 0.87181 1.24859 1.02758 0.81263 0.99437 1.74309 1.14895 1.24944 0.99014 1.74306 1.19308 0.96626 1.23287 1.26586 1.00363 1.01622 0.84940 1.44137 1.48653 1.09237 1.17346 1.21590 0.96901 0.99135 0.97697 1.21894 0.98787 1.01681 0.94309 1.18507 0.92502 0.85221 0.91184 1.84764 1.49335 1.12568 1.82092 1.21362 1.01307 0.94555 0.97521 0.77443 0.85949 1.18007 1.18305 0.84619 0.84812 0.76523 0.90392 0.90570 0.91445 0.90110 0.76108 0.73117 0.91666 0.90710 0.91018 0.90598 0.74361 0.84198 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.08 12.83 -35.23 -0.45 -0.53 16 2 C -0.08 0.14 2.79 36.01 0.10 0.24 16 3 Si 0.69 -1.82 29.86 -169.99 -5.08 -6.90 16 4 C -0.07 0.11 5.35 -104.57 -0.56 -0.45 16 5 C -0.14 0.36 8.64 -39.63 -0.34 0.01 16 6 C -0.06 0.17 9.54 -39.20 -0.37 -0.21 16 7 C -0.16 -0.01 5.89 -104.84 -0.62 -0.62 16 8 C 0.56 0.58 7.73 -12.47 -0.10 0.48 16 9 O -0.52 -2.35 14.82 -16.59 -0.25 -2.59 16 10 N -0.73 1.56 5.03 -54.84 -0.28 1.29 16 11 C 0.15 -0.34 2.46 -67.93 -0.17 -0.51 16 12 H 0.09 -0.06 7.58 -51.93 -0.39 -0.46 16 13 C -0.13 0.50 5.39 -26.73 -0.14 0.36 16 14 C -0.11 0.32 5.19 -26.73 -0.14 0.18 16 15 C 0.00 0.01 2.66 -91.77 -0.24 -0.24 16 16 H 0.11 -0.21 8.14 -51.93 -0.42 -0.63 16 17 C 0.19 0.11 6.99 -154.99 -1.08 -0.97 16 18 N -0.29 -1.36 12.21 32.80 0.40 -0.96 16 19 N -0.30 -1.37 12.21 29.69 0.36 -1.01 16 20 C 0.15 -0.01 13.19 -89.95 -1.19 -1.20 16 21 N -0.58 0.98 5.96 -11.36 -0.07 0.91 16 22 C -0.11 0.32 4.97 -26.75 -0.13 0.19 16 23 C -0.13 0.27 5.49 -26.75 -0.15 0.12 16 24 C 0.17 0.17 6.72 -38.70 -0.26 -0.09 16 25 O -0.48 -0.93 11.58 -40.53 -0.47 -1.39 16 26 C -0.13 0.02 9.60 -39.47 -0.38 -0.36 16 27 H 0.38 -0.99 8.70 45.56 0.40 -0.59 16 28 H 0.12 -0.32 7.96 -51.93 -0.41 -0.73 16 29 H -0.26 -0.26 7.11 56.52 0.40 0.14 16 30 H -0.26 0.24 7.00 56.52 0.40 0.64 16 31 H 0.14 -0.60 4.81 -52.49 -0.25 -0.86 16 32 H 0.13 -0.75 6.40 -52.49 -0.34 -1.08 16 33 H 0.40 -1.89 6.63 -40.82 -0.27 -2.16 16 34 H 0.08 -0.32 8.14 -51.93 -0.42 -0.75 16 35 H 0.08 -0.36 8.14 -51.93 -0.42 -0.78 16 36 H 0.07 -0.21 8.14 -51.93 -0.42 -0.63 16 37 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 38 H 0.22 -0.98 8.06 -52.49 -0.42 -1.40 16 39 H 0.43 -2.13 8.29 -40.82 -0.34 -2.47 16 40 H 0.06 -0.23 7.52 -51.93 -0.39 -0.62 16 41 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 42 H 0.07 -0.18 8.14 -51.93 -0.42 -0.61 16 43 H 0.08 0.01 8.14 -51.93 -0.42 -0.41 16 44 H 0.40 -0.73 9.06 45.56 0.41 -0.32 16 45 H 0.14 -0.04 8.06 -52.49 -0.42 -0.47 16 LS Contribution 369.41 15.07 5.57 5.57 Total: 0.00 -13.01 369.41 -11.04 -24.05 By element: Atomic # 1 Polarization: -10.35 SS G_CDS: -5.02 Total: -15.37 kcal Atomic # 6 Polarization: 2.71 SS G_CDS: -5.77 Total: -3.06 kcal Atomic # 7 Polarization: -0.19 SS G_CDS: 0.42 Total: 0.23 kcal Atomic # 8 Polarization: -3.35 SS G_CDS: -1.17 Total: -4.52 kcal Atomic # 14 Polarization: -1.82 SS G_CDS: -5.08 Total: -6.90 kcal Total LS contribution 5.57 Total: 5.57 kcal Total: -13.01 -11.04 -24.05 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16624780_13422076.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 15.965 kcal (2) G-P(sol) polarization free energy of solvation -13.006 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 2.959 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.044 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.050 kcal (6) G-S(sol) free energy of system = (1) + (5) -8.085 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds