Wall clock time and date at job start Sun Mar 7 2021 05:35:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50692 * 1 3 3 C 1.37781 * 119.85338 * 2 1 4 4 C 1.39707 * 119.91011 * 180.02562 * 3 2 1 5 5 C 1.47542 * 120.19074 * 179.97438 * 4 3 2 6 6 O 1.21593 * 119.99898 * 180.02562 * 5 4 3 7 7 N 1.34775 * 119.99914 * 359.97438 * 5 4 3 8 8 C 1.46501 * 119.99670 * 180.02562 * 7 5 4 9 9 H 1.09003 * 109.47361 * 325.00275 * 8 7 5 10 10 C 1.52997 * 109.47097 * 85.00326 * 8 7 5 11 11 C 1.52999 * 109.47222 * 179.97438 * 10 8 7 12 12 C 1.52997 * 109.47098 * 299.99900 * 11 10 8 13 13 H 1.09003 * 109.47057 * 300.00158 * 12 11 10 14 14 C 1.50704 * 109.47478 * 180.02562 * 12 11 10 15 15 N 1.30518 * 126.34487 * 145.02527 * 14 12 11 16 16 N 1.28604 * 109.66680 * 179.97438 * 15 14 12 17 17 C 1.30519 * 109.67489 * 0.02562 * 16 15 14 18 18 N 1.35487 * 126.34300 * 324.98084 * 14 12 11 19 19 C 1.53005 * 109.47444 * 59.99955 * 12 11 10 20 20 C 1.52997 * 109.47157 * 205.00186 * 8 7 5 21 21 C 1.40132 * 119.61777 * 0.24952 * 4 3 2 22 22 O 1.35657 * 120.15000 * 179.72454 * 21 4 3 23 23 C 1.38710 * 119.69906 * 359.49845 * 21 4 3 24 24 C 1.50703 * 119.96123 * 180.26896 * 23 21 4 25 25 O 1.42899 * 109.47184 * 285.23647 * 24 23 21 26 26 Si 1.86300 * 109.47257 * 165.23228 * 24 23 21 27 27 C 1.38060 * 120.08280 * 0.50379 * 23 21 4 28 28 H 1.08995 * 109.47526 * 90.00052 * 1 2 3 29 29 H 1.09000 * 109.47350 * 210.00082 * 1 2 3 30 30 H 1.09006 * 109.47220 * 329.99873 * 1 2 3 31 31 H 1.08005 * 120.04418 * 0.02562 * 3 2 1 32 32 H 0.96999 * 120.00249 * 0.02562 * 7 5 4 33 33 H 1.09004 * 109.46813 * 299.99524 * 10 8 7 34 34 H 1.08998 * 109.47328 * 60.00127 * 10 8 7 35 35 H 1.09002 * 109.47601 * 179.97438 * 11 10 8 36 36 H 1.09003 * 109.47296 * 59.99912 * 11 10 8 37 37 H 1.08002 * 126.34231 * 180.02562 * 17 16 15 38 38 H 0.97003 * 126.98189 * 0.03596 * 18 14 12 39 39 H 1.08998 * 109.47099 * 59.99697 * 19 12 11 40 40 H 1.08995 * 109.47501 * 180.02562 * 19 12 11 41 41 H 1.09000 * 109.47336 * 59.99563 * 20 8 7 42 42 H 1.09003 * 109.47057 * 300.00275 * 20 8 7 43 43 H 0.96702 * 113.99959 * 90.01039 * 22 21 4 44 44 H 1.08998 * 109.46751 * 45.23417 * 24 23 21 45 45 H 0.96703 * 113.99600 * 299.99659 * 25 24 23 46 46 H 1.48501 * 110.00040 * 180.02562 * 26 24 23 47 47 H 1.48500 * 109.99996 * 301.32476 * 26 24 23 48 48 H 1.07993 * 119.80368 * 179.76524 * 27 23 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.1928 1.1950 0.0000 4 6 3.5898 1.1964 -0.0005 5 6 4.3305 2.4724 -0.0011 6 8 5.5465 2.4695 -0.0021 7 7 3.6594 3.6411 -0.0016 8 6 4.3949 4.9081 -0.0028 9 1 5.3056 4.8001 0.5864 10 6 4.7590 5.2851 -1.4402 11 6 5.5266 6.6086 -1.4414 12 6 4.6518 7.7062 -0.8324 13 1 3.7411 7.8137 -1.4216 14 6 5.4076 9.0100 -0.8342 15 7 4.8996 10.1983 -1.0172 16 7 5.8318 11.0819 -0.9542 17 6 6.9768 10.4974 -0.7287 18 7 6.7401 9.1659 -0.6453 19 6 4.2876 7.3292 0.6051 20 6 3.5206 6.0059 0.6065 21 6 4.2836 -0.0212 -0.0064 22 8 5.6401 -0.0324 -0.0126 23 6 3.5770 -1.2148 -0.0010 24 6 4.3171 -2.5275 -0.0011 25 8 4.8543 -2.7714 -1.3027 26 14 3.1444 -3.9017 0.4542 27 6 2.1965 -1.2017 -0.0005 28 1 -0.3634 0.0000 -1.0276 29 1 -0.3634 -0.8900 0.5138 30 1 -0.3634 0.8900 0.5139 31 1 1.6511 2.1294 0.0004 32 1 2.6894 3.6434 -0.0013 33 1 5.3820 4.5030 -1.8742 34 1 3.8484 5.3932 -2.0293 35 1 5.7865 6.8771 -2.4654 36 1 6.4374 6.5011 -0.8522 37 1 7.9351 10.9849 -0.6263 38 1 7.3924 8.4663 -0.4838 39 1 5.1982 7.2216 1.1943 40 1 3.6640 8.1109 1.0388 41 1 3.2611 5.7374 1.6305 42 1 2.6099 6.1139 0.0174 43 1 6.0374 -0.0378 0.8690 44 1 5.1288 -2.4870 0.7252 45 1 4.1870 -2.8201 -2.0008 46 1 3.8623 -5.2016 0.4582 47 1 2.5546 -3.6435 1.7923 48 1 1.6509 -2.1337 -0.0001 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16624780_13422088.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:35:04 Heat of formation + Delta-G solvation = -14.120025 kcal Electronic energy + Delta-G solvation = -31907.693502 eV Core-core repulsion = 27544.175197 eV Total energy + Delta-G solvation = -4363.518305 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 359.168 amu Computer time = 1.29 seconds Orbital eigenvalues (eV) -44.11500 -41.83595 -40.61766 -39.15561 -38.05517 -37.59931 -35.71147 -34.58180 -33.32568 -33.13620 -32.07567 -31.99869 -29.56909 -27.71077 -26.85657 -25.62268 -24.40876 -24.02353 -23.27474 -22.23108 -22.01237 -21.46625 -20.95973 -19.61956 -19.36660 -18.40868 -18.13150 -17.50469 -16.90751 -16.81713 -16.80537 -16.36674 -16.29297 -16.02994 -15.80401 -15.51683 -15.31625 -15.14902 -15.01965 -14.76546 -14.67656 -14.20792 -14.18767 -13.85568 -13.77223 -13.46922 -13.46036 -13.11064 -12.82331 -12.67557 -12.51132 -12.43031 -12.32455 -12.19782 -12.07831 -11.84195 -11.80317 -11.72692 -11.59309 -11.29496 -10.85803 -10.40949 -10.27030 -10.17473 -10.08344 -9.59511 -5.13976 -0.40322 -0.01249 0.82265 1.18152 1.54721 1.71642 1.77524 1.88154 1.93261 1.99445 2.52659 3.07591 3.11595 3.30474 3.35400 3.45946 3.48112 3.53323 3.61740 3.69602 3.80009 3.94007 3.98117 3.99188 4.05046 4.14176 4.16161 4.20330 4.24406 4.34412 4.35334 4.46619 4.48234 4.50114 4.52429 4.61613 4.63913 4.80586 4.83502 4.84556 4.89524 4.90472 4.91344 5.05699 5.09513 5.14033 5.15277 5.23765 5.38262 5.50537 6.04363 6.38933 6.56148 6.69740 7.17009 7.76682 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.117 4.117 2 C -0.097 4.097 3 C -0.068 4.068 4 C -0.165 4.165 5 C 0.561 3.439 6 O -0.517 6.517 7 N -0.726 5.726 8 C 0.146 3.854 9 H 0.090 0.910 10 C -0.128 4.128 11 C -0.114 4.114 12 C -0.003 4.003 13 H 0.110 0.890 14 C 0.186 3.814 15 N -0.291 5.291 16 N -0.296 5.296 17 C 0.154 3.846 18 N -0.581 5.581 19 C -0.106 4.106 20 C -0.126 4.126 21 C 0.190 3.810 22 O -0.467 6.467 23 C -0.154 4.154 24 C -0.058 4.058 25 O -0.530 6.530 26 Si 0.682 3.318 27 C -0.073 4.073 28 H 0.077 0.923 29 H 0.072 0.928 30 H 0.070 0.930 31 H 0.132 0.868 32 H 0.399 0.601 33 H 0.076 0.924 34 H 0.071 0.929 35 H 0.074 0.926 36 H 0.064 0.936 37 H 0.223 0.777 38 H 0.429 0.571 39 H 0.067 0.933 40 H 0.080 0.920 41 H 0.077 0.923 42 H 0.076 0.924 43 H 0.393 0.607 44 H 0.111 0.889 45 H 0.377 0.623 46 H -0.251 1.251 47 H -0.255 1.255 48 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.394 -3.550 1.469 5.836 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C -0.097 4.097 3 C -0.086 4.086 4 C -0.169 4.169 5 C 0.348 3.652 6 O -0.393 6.393 7 N -0.378 5.378 8 C 0.041 3.959 9 H 0.108 0.892 10 C -0.166 4.166 11 C -0.153 4.153 12 C -0.024 4.024 13 H 0.128 0.872 14 C -0.083 4.083 15 N -0.132 5.132 16 N -0.135 5.135 17 C -0.135 4.135 18 N -0.194 5.194 19 C -0.145 4.145 20 C -0.164 4.164 21 C 0.143 3.857 22 O -0.277 6.277 23 C -0.155 4.155 24 C -0.169 4.169 25 O -0.335 6.335 26 Si 0.584 3.416 27 C -0.090 4.090 28 H 0.096 0.904 29 H 0.091 0.909 30 H 0.089 0.911 31 H 0.149 0.851 32 H 0.234 0.766 33 H 0.094 0.906 34 H 0.090 0.910 35 H 0.093 0.907 36 H 0.083 0.917 37 H 0.239 0.761 38 H 0.269 0.731 39 H 0.085 0.915 40 H 0.099 0.901 41 H 0.095 0.905 42 H 0.094 0.906 43 H 0.251 0.749 44 H 0.129 0.871 45 H 0.224 0.776 46 H -0.176 1.176 47 H -0.180 1.180 48 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges -4.292 -2.933 1.500 5.411 hybrid contribution 1.515 -0.717 0.970 1.937 sum -2.777 -3.650 2.470 5.209 Atomic orbital electron populations 1.20845 0.89899 1.03539 1.03118 1.19806 0.96845 0.92244 1.00788 1.21132 0.92112 0.98328 0.97057 1.20392 0.93966 0.93474 1.09044 1.18031 0.87315 0.83328 0.76515 1.90835 1.12980 1.87262 1.48204 1.45971 1.10259 1.05375 1.76213 1.21020 0.96003 0.82095 0.96752 0.89172 1.21899 1.01131 0.96808 0.96800 1.21599 0.98210 0.93850 1.01669 1.19786 0.98125 0.85877 0.98619 0.87167 1.24858 0.81892 0.98358 1.03209 1.74306 1.24167 0.96126 1.18553 1.74306 0.96383 1.25409 1.17432 1.26587 1.01989 0.80805 1.04135 1.44138 1.09922 1.10101 1.55211 1.21516 1.01103 0.97149 0.94763 1.21802 0.98870 0.93653 1.02060 1.18231 0.83949 0.89714 0.93845 1.84813 1.14061 1.95880 1.32969 1.20751 0.94090 0.95922 1.04740 1.24937 1.03766 0.98618 0.89597 1.86585 1.36940 1.94138 1.15847 0.94980 0.83505 0.77766 0.85399 1.20988 0.92565 0.97980 0.97514 0.90412 0.90907 0.91074 0.85069 0.76568 0.90564 0.90996 0.90684 0.91689 0.76109 0.73115 0.91467 0.90119 0.90473 0.90568 0.74909 0.87136 0.77632 1.17601 1.17968 0.84590 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.52 10.00 36.00 0.36 0.88 16 2 C -0.10 0.23 5.87 -104.68 -0.61 -0.39 16 3 C -0.07 0.13 9.18 -39.20 -0.36 -0.23 16 4 C -0.17 -0.11 5.89 -104.84 -0.62 -0.73 16 5 C 0.56 0.93 7.73 -12.47 -0.10 0.83 16 6 O -0.52 -2.68 14.82 -16.60 -0.25 -2.92 16 7 N -0.73 1.19 5.03 -54.85 -0.28 0.91 16 8 C 0.15 -0.28 2.45 -67.93 -0.17 -0.45 16 9 H 0.09 -0.02 7.58 -51.93 -0.39 -0.41 16 10 C -0.13 0.23 5.49 -26.73 -0.15 0.08 16 11 C -0.11 0.29 4.97 -26.73 -0.13 0.16 16 12 C 0.00 0.01 2.66 -91.77 -0.24 -0.24 16 13 H 0.11 -0.19 8.14 -51.93 -0.42 -0.61 16 14 C 0.19 0.15 6.99 -154.99 -1.08 -0.93 16 15 N -0.29 -1.41 12.21 32.80 0.40 -1.01 16 16 N -0.30 -1.41 12.21 29.69 0.36 -1.05 16 17 C 0.15 0.01 13.19 -89.95 -1.19 -1.18 16 18 N -0.58 0.86 5.96 -11.36 -0.07 0.79 16 19 C -0.11 0.29 5.19 -26.75 -0.14 0.15 16 20 C -0.13 0.45 5.39 -26.76 -0.14 0.31 16 21 C 0.19 0.32 6.69 -38.70 -0.26 0.06 16 22 O -0.47 -1.44 10.91 -40.55 -0.44 -1.88 16 23 C -0.15 0.02 5.27 -104.51 -0.55 -0.54 16 24 C -0.06 0.01 2.37 36.01 0.09 0.09 16 25 O -0.53 -0.59 12.88 -35.23 -0.45 -1.05 16 26 Si 0.68 -1.14 29.91 -169.99 -5.08 -6.23 16 27 C -0.07 0.14 8.30 -39.53 -0.33 -0.18 16 28 H 0.08 -0.38 8.14 -51.93 -0.42 -0.81 16 29 H 0.07 -0.36 8.08 -51.93 -0.42 -0.78 16 30 H 0.07 -0.36 8.08 -51.93 -0.42 -0.78 16 31 H 0.13 -0.62 6.40 -52.48 -0.34 -0.96 16 32 H 0.40 -1.66 6.63 -40.82 -0.27 -1.93 16 33 H 0.08 0.04 8.14 -51.93 -0.42 -0.38 16 34 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 35 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 36 H 0.06 -0.21 7.52 -51.93 -0.39 -0.60 16 37 H 0.22 -0.94 8.06 -52.49 -0.42 -1.36 16 38 H 0.43 -2.03 8.29 -40.82 -0.34 -2.37 16 39 H 0.07 -0.18 8.14 -51.93 -0.42 -0.61 16 40 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 41 H 0.08 -0.29 8.14 -51.93 -0.42 -0.71 16 42 H 0.08 -0.33 8.14 -51.93 -0.42 -0.76 16 43 H 0.39 -0.11 9.06 45.56 0.41 0.30 16 44 H 0.11 0.03 7.83 -51.93 -0.41 -0.38 16 45 H 0.38 -1.10 8.70 45.56 0.40 -0.71 16 46 H -0.25 -0.45 7.11 56.52 0.40 -0.05 16 47 H -0.26 -0.11 7.11 56.52 0.40 0.29 16 48 H 0.14 -0.60 5.10 -52.49 -0.27 -0.87 16 LS Contribution 390.40 15.07 5.88 5.88 Total: 0.00 -13.64 390.40 -11.40 -25.04 By element: Atomic # 1 Polarization: -10.35 SS G_CDS: -5.86 Total: -16.21 kcal Atomic # 6 Polarization: 3.33 SS G_CDS: -5.62 Total: -2.29 kcal Atomic # 7 Polarization: -0.77 SS G_CDS: 0.42 Total: -0.35 kcal Atomic # 8 Polarization: -4.71 SS G_CDS: -1.14 Total: -5.86 kcal Atomic # 14 Polarization: -1.14 SS G_CDS: -5.08 Total: -6.23 kcal Total LS contribution 5.88 Total: 5.88 kcal Total: -13.64 -11.40 -25.04 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16624780_13422088.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 10.922 kcal (2) G-P(sol) polarization free energy of solvation -13.637 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -2.715 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.405 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.042 kcal (6) G-S(sol) free energy of system = (1) + (5) -14.120 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.29 seconds