Wall clock time and date at job start Sun Mar 7 2021 05:35:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86299 * 109.47055 * 2 1 4 4 C 1.50700 * 109.46887 * 120.00201 * 2 1 3 5 5 C 1.34183 * 125.43869 * 65.00244 * 4 2 1 6 6 C 1.47019 * 105.95086 * 179.97438 * 5 4 2 7 7 C 1.47381 * 127.18678 * 179.97438 * 6 5 4 8 8 O 1.21613 * 120.00508 * 359.97438 * 7 6 5 9 9 N 1.34773 * 119.99954 * 180.02562 * 7 6 5 10 10 C 1.46501 * 120.00518 * 180.02562 * 9 7 6 11 11 H 1.09000 * 109.47087 * 34.99139 * 10 9 7 12 12 C 1.52993 * 109.47424 * 154.99483 * 10 9 7 13 13 C 1.53005 * 109.46940 * 179.97438 * 12 10 9 14 14 C 1.53003 * 109.47464 * 300.00001 * 13 12 10 15 15 H 1.09000 * 109.46869 * 300.00085 * 14 13 12 16 16 C 1.50693 * 109.47024 * 179.97438 * 14 13 12 17 17 N 1.30524 * 126.34456 * 95.02941 * 16 14 13 18 18 N 1.28592 * 109.67571 * 179.97438 * 17 16 14 19 19 C 1.30523 * 109.67062 * 359.97438 * 18 17 16 20 20 N 1.35485 * 126.34868 * 274.98428 * 16 14 13 21 21 C 1.52999 * 109.46768 * 59.99648 * 14 13 12 22 22 C 1.52997 * 109.47602 * 300.00516 * 21 14 13 23 23 C 1.36410 * 105.61997 * 0.25936 * 6 5 4 24 24 O 1.33661 * 108.39493 * 359.57559 * 23 6 5 25 25 H 0.96701 * 113.99778 * 299.99733 * 1 2 3 26 26 H 1.09001 * 109.46658 * 240.00335 * 2 1 3 27 27 H 1.48503 * 109.99854 * 178.68039 * 3 2 1 28 28 H 1.48491 * 110.00080 * 299.99779 * 3 2 1 29 29 H 1.08001 * 127.01950 * 0.02562 * 5 4 2 30 30 H 0.97001 * 119.99930 * 359.97438 * 9 7 6 31 31 H 1.09009 * 109.47263 * 60.00381 * 12 10 9 32 32 H 1.08998 * 109.47579 * 300.00100 * 12 10 9 33 33 H 1.08999 * 109.46940 * 179.97438 * 13 12 10 34 34 H 1.08996 * 109.46773 * 60.00566 * 13 12 10 35 35 H 1.07999 * 126.34611 * 180.02562 * 19 18 17 36 36 H 0.96997 * 126.98100 * 0.05747 * 20 16 14 37 37 H 1.09004 * 109.46695 * 60.00240 * 21 14 13 38 38 H 1.08998 * 109.47304 * 179.97438 * 21 14 13 39 39 H 1.09004 * 109.46870 * 299.99617 * 22 21 14 40 40 H 1.08999 * 109.47128 * 180.02562 * 22 21 14 41 41 H 1.07998 * 125.80421 * 179.73146 * 23 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 1.2305 5 6 1.7551 -2.0123 1.5036 6 6 2.4130 -2.2463 2.7974 7 6 2.5006 -3.5194 3.5348 8 8 1.9922 -4.5243 3.0758 9 7 3.1431 -3.5697 4.7184 10 6 3.2308 -4.8352 5.4513 11 1 3.3216 -5.6593 4.7437 12 6 4.4568 -4.8110 6.3661 13 6 4.5479 -6.1324 7.1319 14 6 3.2856 -6.3210 7.9758 15 1 3.1949 -5.4967 8.6831 16 6 3.3751 -7.6229 8.7295 17 7 3.7992 -7.7803 9.9538 18 7 3.7392 -9.0236 10.2763 19 6 3.2735 -9.7159 9.2725 20 7 3.0294 -8.8467 8.2622 21 6 2.0595 -6.3451 7.0608 22 6 1.9684 -5.0238 6.2950 23 6 2.9197 -1.0377 3.1757 24 8 2.6269 -0.1421 2.2277 25 1 -0.3933 0.4417 0.7651 26 1 1.7923 -0.5138 -0.8900 27 1 3.5347 1.7703 0.0321 28 1 1.5616 2.4678 -1.2084 29 1 1.2366 -2.7397 0.8966 30 1 3.5483 -2.7681 5.0848 31 1 4.3659 -3.9869 7.0739 32 1 5.3561 -4.6762 5.7651 33 1 5.4216 -6.1154 7.7834 34 1 4.6386 -6.9567 6.4246 35 1 3.1126 -10.7836 9.2513 36 1 2.6787 -9.0578 7.3828 37 1 2.1503 -7.1695 6.3535 38 1 1.1602 -6.4799 7.6618 39 1 1.8777 -4.1994 7.0024 40 1 1.0947 -5.0408 5.6436 41 1 3.4669 -0.8388 4.0853 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16624780_13456056.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:35:22 Heat of formation + Delta-G solvation = 21.392946 kcal Electronic energy + Delta-G solvation = -25951.219238 eV Core-core repulsion = 22028.542269 eV Total energy + Delta-G solvation = -3922.676969 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 319.136 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -44.12686 -43.78048 -41.03932 -39.26320 -38.08798 -35.78485 -34.60719 -34.03537 -32.60120 -32.09562 -31.67258 -29.61186 -26.79276 -25.53447 -24.39021 -23.96714 -23.23290 -22.32951 -22.12964 -21.36468 -20.69446 -19.42501 -19.36477 -17.98842 -17.61215 -17.39706 -17.28003 -16.82085 -16.42634 -16.36111 -16.08254 -15.91008 -15.66389 -15.27109 -15.08557 -14.79957 -14.26154 -14.18642 -14.03692 -13.88969 -13.63526 -13.48298 -12.92290 -12.85020 -12.54168 -12.45538 -12.34496 -12.18882 -11.87213 -11.81556 -11.61872 -11.32324 -11.06759 -10.93065 -10.70340 -10.22793 -10.17664 -9.87415 -5.11682 0.16578 0.81099 0.84071 1.06653 1.40947 1.71208 1.76325 1.85967 1.92234 1.95030 2.28319 3.06027 3.14911 3.30476 3.37563 3.45540 3.52658 3.66447 3.77889 3.84430 3.92608 3.99531 4.11698 4.14095 4.18211 4.20775 4.31031 4.33503 4.46299 4.48147 4.52213 4.60191 4.71956 4.78814 4.82414 4.87385 4.88762 5.04905 5.10178 5.12823 5.15809 5.34104 5.77041 6.03287 6.32573 6.35249 7.12620 7.75686 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.029 4.029 3 Si 0.707 3.293 4 C -0.058 4.058 5 C -0.124 4.124 6 C -0.239 4.239 7 C 0.589 3.411 8 O -0.531 6.531 9 N -0.725 5.725 10 C 0.145 3.855 11 H 0.091 0.909 12 C -0.126 4.126 13 C -0.107 4.107 14 C -0.003 4.003 15 H 0.111 0.889 16 C 0.186 3.814 17 N -0.291 5.291 18 N -0.296 5.296 19 C 0.154 3.846 20 N -0.581 5.581 21 C -0.115 4.115 22 C -0.128 4.128 23 C 0.033 3.967 24 O -0.165 6.165 25 H 0.384 0.616 26 H 0.134 0.866 27 H -0.254 1.254 28 H -0.247 1.247 29 H 0.161 0.839 30 H 0.399 0.601 31 H 0.076 0.924 32 H 0.077 0.923 33 H 0.080 0.920 34 H 0.067 0.933 35 H 0.223 0.777 36 H 0.429 0.571 37 H 0.065 0.935 38 H 0.075 0.925 39 H 0.072 0.928 40 H 0.075 0.925 41 H 0.214 0.786 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.081 3.520 -0.816 3.614 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.335 6.335 2 C -0.139 4.139 3 Si 0.606 3.394 4 C -0.106 4.106 5 C -0.143 4.143 6 C -0.243 4.243 7 C 0.377 3.623 8 O -0.408 6.408 9 N -0.376 5.376 10 C 0.041 3.959 11 H 0.109 0.891 12 C -0.164 4.164 13 C -0.146 4.146 14 C -0.024 4.024 15 H 0.129 0.871 16 C -0.083 4.083 17 N -0.131 5.131 18 N -0.135 5.135 19 C -0.135 4.135 20 N -0.194 5.194 21 C -0.154 4.154 22 C -0.166 4.166 23 C -0.038 4.038 24 O -0.061 6.061 25 H 0.232 0.768 26 H 0.151 0.849 27 H -0.178 1.178 28 H -0.171 1.171 29 H 0.179 0.821 30 H 0.233 0.767 31 H 0.095 0.905 32 H 0.096 0.904 33 H 0.099 0.901 34 H 0.086 0.914 35 H 0.239 0.761 36 H 0.269 0.731 37 H 0.083 0.917 38 H 0.093 0.907 39 H 0.091 0.909 40 H 0.094 0.906 41 H 0.231 0.769 Dipole moment (debyes) X Y Z Total from point charges 0.803 3.710 -0.602 3.843 hybrid contribution -0.446 -1.197 -1.493 1.965 sum 0.357 2.512 -2.095 3.291 Atomic orbital electron populations 1.86582 1.16086 1.81733 1.49134 1.24468 0.85288 1.11379 0.92791 0.94249 0.81368 0.76513 0.87239 1.22744 1.01592 0.93480 0.92786 1.22542 1.01085 0.95323 0.95388 1.21523 1.09282 0.94316 0.99202 1.17265 0.77809 0.87107 0.80094 1.90816 1.46272 1.35651 1.68027 1.45886 1.57807 1.12628 1.21316 1.21043 0.94850 0.86654 0.93362 0.89090 1.21811 0.97638 0.98456 0.98466 1.21529 0.97145 0.97505 0.98401 1.19782 0.96343 0.90251 0.96019 0.87142 1.24853 1.01438 0.88510 0.93549 1.74303 1.18697 1.10396 1.09753 1.74307 1.17248 0.98133 1.23829 1.26591 1.02543 0.99294 0.85075 1.44137 1.50622 1.07818 1.16795 1.21602 0.97380 0.98482 0.97903 1.21898 0.98530 0.97304 0.98887 1.24480 0.99425 0.86722 0.93183 1.83688 1.57201 1.38959 1.26266 0.76801 0.84936 1.17778 1.17126 0.82093 0.76724 0.90518 0.90420 0.90095 0.91446 0.76105 0.73113 0.91672 0.90657 0.90931 0.90589 0.76940 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.46 12.88 -35.23 -0.45 0.00 16 2 C -0.03 0.04 2.97 36.01 0.11 0.14 16 3 Si 0.71 -1.40 32.09 -169.99 -5.46 -6.85 16 4 C -0.06 0.02 6.18 -35.74 -0.22 -0.20 16 5 C -0.12 -0.16 10.90 -37.45 -0.41 -0.56 16 6 C -0.24 -0.06 6.31 -103.28 -0.65 -0.71 16 7 C 0.59 0.77 7.78 -12.54 -0.10 0.67 16 8 O -0.53 -2.90 16.65 5.27 0.09 -2.81 16 9 N -0.73 1.71 5.07 -54.90 -0.28 1.43 16 10 C 0.15 -0.35 2.45 -67.93 -0.17 -0.52 16 11 H 0.09 -0.04 7.58 -51.93 -0.39 -0.43 16 12 C -0.13 0.51 5.39 -26.73 -0.14 0.36 16 13 C -0.11 0.32 5.19 -26.73 -0.14 0.18 16 14 C 0.00 0.01 2.66 -91.77 -0.24 -0.24 16 15 H 0.11 -0.23 8.14 -51.93 -0.42 -0.65 16 16 C 0.19 0.10 6.99 -154.99 -1.08 -0.98 16 17 N -0.29 -1.34 12.21 32.79 0.40 -0.94 16 18 N -0.30 -1.36 12.21 29.69 0.36 -0.99 16 19 C 0.15 -0.02 13.19 -89.94 -1.19 -1.20 16 20 N -0.58 1.00 5.96 -11.36 -0.07 0.93 16 21 C -0.11 0.35 4.97 -26.73 -0.13 0.22 16 22 C -0.13 0.31 5.49 -26.73 -0.15 0.16 16 23 C 0.03 -0.09 11.61 30.07 0.35 0.26 16 24 O -0.17 0.21 8.90 7.64 0.07 0.27 16 25 H 0.38 -1.84 8.70 45.56 0.40 -1.44 16 26 H 0.13 -0.19 7.96 -51.93 -0.41 -0.60 16 27 H -0.25 -0.22 7.11 56.52 0.40 0.19 16 28 H -0.25 -0.19 7.11 56.52 0.40 0.21 16 29 H 0.16 0.30 8.06 -52.49 -0.42 -0.13 16 30 H 0.40 -2.17 7.57 -40.82 -0.31 -2.48 16 31 H 0.08 -0.38 8.14 -51.92 -0.42 -0.80 16 32 H 0.08 -0.31 8.14 -51.93 -0.42 -0.74 16 33 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 34 H 0.07 -0.20 8.14 -51.93 -0.42 -0.62 16 35 H 0.22 -0.98 8.06 -52.49 -0.42 -1.40 16 36 H 0.43 -2.14 8.28 -40.82 -0.34 -2.48 16 37 H 0.06 -0.23 7.52 -51.93 -0.39 -0.63 16 38 H 0.07 -0.19 8.14 -51.93 -0.42 -0.62 16 39 H 0.07 -0.23 8.14 -51.93 -0.42 -0.65 16 40 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 41 H 0.21 -1.56 7.47 -52.49 -0.39 -1.95 16 LS Contribution 348.60 15.07 5.25 5.25 Total: 0.00 -12.88 348.60 -9.51 -22.39 By element: Atomic # 1 Polarization: -11.00 SS G_CDS: -5.27 Total: -16.27 kcal Atomic # 6 Polarization: 1.75 SS G_CDS: -4.16 Total: -2.42 kcal Atomic # 7 Polarization: 0.01 SS G_CDS: 0.42 Total: 0.42 kcal Atomic # 8 Polarization: -2.23 SS G_CDS: -0.30 Total: -2.53 kcal Atomic # 14 Polarization: -1.40 SS G_CDS: -5.46 Total: -6.85 kcal Total LS contribution 5.25 Total: 5.25 kcal Total: -12.88 -9.51 -22.39 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16624780_13456056.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 43.787 kcal (2) G-P(sol) polarization free energy of solvation -12.881 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 30.906 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.513 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.394 kcal (6) G-S(sol) free energy of system = (1) + (5) 21.393 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds