Wall clock time and date at job start Sun Mar 7 2021 05:35:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86302 * 109.46951 * 2 1 4 4 C 1.50704 * 109.47072 * 119.99696 * 2 1 3 5 5 C 1.31116 * 118.54705 * 250.00115 * 4 2 1 6 6 N 1.38922 * 121.84433 * 180.38403 * 5 4 2 7 7 C 1.47025 * 118.88710 * 346.68343 * 6 5 4 8 8 C 1.50701 * 109.82293 * 163.20441 * 7 6 5 9 9 O 1.21284 * 119.99770 * 340.86146 * 8 7 6 10 10 N 1.34780 * 120.00162 * 160.86564 * 8 7 6 11 11 C 1.46492 * 119.99930 * 179.97438 * 10 8 7 12 12 H 1.09002 * 109.47696 * 34.99761 * 11 10 8 13 13 C 1.53002 * 109.47204 * 155.00105 * 11 10 8 14 14 C 1.53000 * 109.47233 * 180.02562 * 13 11 10 15 15 C 1.52997 * 109.47060 * 299.99657 * 14 13 11 16 16 H 1.09002 * 109.47153 * 300.00319 * 15 14 13 17 17 C 1.50697 * 109.47466 * 180.02562 * 15 14 13 18 18 N 1.30515 * 126.34551 * 95.02233 * 17 15 14 19 19 N 1.28595 * 109.67772 * 179.97438 * 18 17 15 20 20 C 1.30522 * 109.66886 * 0.02562 * 19 18 17 21 21 N 1.35495 * 107.30854 * 359.77094 * 20 19 18 22 22 C 1.52999 * 109.47317 * 59.99960 * 15 14 13 23 23 C 1.52997 * 109.47244 * 274.99857 * 11 10 8 24 24 C 1.53541 * 107.70913 * 43.63511 * 7 6 5 25 25 C 1.50196 * 118.54332 * 69.98114 * 4 2 1 26 26 H 0.96696 * 114.00038 * 59.99937 * 1 2 3 27 27 H 1.08989 * 109.47345 * 240.00038 * 2 1 3 28 28 H 1.48498 * 109.99882 * 298.68256 * 3 2 1 29 29 H 1.48506 * 110.00019 * 59.99894 * 3 2 1 30 30 H 1.07997 * 119.07607 * 0.40570 * 5 4 2 31 31 H 0.97008 * 120.55349 * 166.70768 * 6 5 4 32 32 H 1.09001 * 109.82319 * 284.06017 * 7 6 5 33 33 H 0.96998 * 119.99716 * 359.97438 * 10 8 7 34 34 H 1.08992 * 109.47063 * 59.99836 * 13 11 10 35 35 H 1.09004 * 109.46733 * 299.99549 * 13 11 10 36 36 H 1.09002 * 109.47398 * 59.99826 * 14 13 11 37 37 H 1.09001 * 109.47194 * 180.02562 * 14 13 11 38 38 H 1.07996 * 126.34634 * 180.02562 * 20 19 18 39 39 H 0.96998 * 126.98144 * 180.22361 * 21 20 19 40 40 H 1.09000 * 109.47486 * 180.02562 * 22 15 14 41 41 H 1.09002 * 109.46716 * 60.00091 * 22 15 14 42 42 H 1.09002 * 109.47153 * 300.00242 * 23 11 10 43 43 H 1.09001 * 109.47289 * 60.00326 * 23 11 10 44 44 H 1.08996 * 109.62280 * 58.80495 * 24 7 6 45 45 H 1.09005 * 109.62252 * 179.36239 * 24 7 6 46 46 H 1.09003 * 109.33556 * 280.22619 * 25 4 2 47 47 H 1.09003 * 109.33281 * 39.88012 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.5116 -0.0027 2.1695 6 7 3.0066 -0.5880 3.3281 7 6 2.6220 -1.9711 3.6455 8 6 3.5612 -2.5385 4.6785 9 8 4.6442 -2.0240 4.8611 10 7 3.1976 -3.6176 5.3995 11 6 4.1107 -4.1695 6.4033 12 1 4.6662 -3.3584 6.8742 13 6 3.3066 -4.9212 7.4659 14 6 4.2603 -5.4970 8.5146 15 6 5.2390 -6.4601 7.8398 16 1 4.6839 -7.2715 7.3690 17 6 6.1779 -7.0278 8.8728 18 7 6.0382 -8.1607 9.5056 19 7 7.0242 -8.3297 10.3137 20 6 7.8375 -7.3121 10.2334 21 7 7.3262 -6.4590 9.3132 22 6 6.0432 -5.7086 6.7771 23 6 5.0890 -5.1327 5.7280 24 6 2.7158 -2.7907 2.3505 25 6 1.7447 -2.1976 1.3271 26 1 -0.3933 0.4417 -0.7650 27 1 1.7923 -0.5138 -0.8899 28 1 1.5878 2.4585 -1.2242 29 1 1.5614 2.4679 1.2085 30 1 2.6070 1.0650 2.0388 31 1 3.5959 -0.0922 3.9181 32 1 1.6000 -1.9930 4.0237 33 1 2.3312 -4.0288 5.2537 34 1 2.7512 -5.7322 6.9950 35 1 2.6097 -4.2349 7.9470 36 1 4.8154 -4.6856 8.9855 37 1 3.6874 -6.0329 9.2715 38 1 8.7511 -7.1771 10.7933 39 1 7.7044 -5.6123 9.0288 40 1 6.7401 -6.3948 6.2960 41 1 6.5983 -4.8972 7.2480 42 1 4.5336 -5.9438 5.2571 43 1 5.6620 -4.5973 4.9710 44 1 3.7322 -2.7429 1.9598 45 1 2.4471 -3.8275 2.5533 46 1 0.7216 -2.4137 1.6348 47 1 1.9313 -2.6487 0.3525 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16624780_15413834.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:35:33 Heat of formation + Delta-G solvation = 23.241837 kcal Electronic energy + Delta-G solvation = -28677.322408 eV Core-core repulsion = 24669.595178 eV Total energy + Delta-G solvation = -4007.727230 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 334.179 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -44.13792 -41.59676 -40.12844 -39.04739 -37.45834 -35.85244 -34.61069 -33.37678 -33.28102 -32.22215 -32.11060 -29.76122 -27.45414 -25.44929 -24.76671 -24.22981 -23.66188 -23.24792 -22.22929 -21.65178 -21.13410 -19.39986 -19.16262 -19.10506 -18.36617 -17.58267 -17.55966 -16.84118 -16.54178 -16.33545 -16.24531 -15.86879 -15.47555 -15.42212 -15.25392 -14.96839 -14.67366 -14.56754 -14.23594 -14.10688 -13.82210 -13.77758 -13.62261 -13.49759 -12.93601 -12.85920 -12.55519 -12.47487 -12.41018 -12.35490 -11.88748 -11.82799 -11.76341 -11.68439 -11.63240 -11.32389 -11.26290 -10.83677 -10.26742 -10.24804 -10.19174 -8.46577 -4.91671 0.79929 1.30211 1.38785 1.45772 1.61239 1.73330 1.78910 1.91292 1.99073 2.57731 3.04567 3.29508 3.41774 3.45869 3.58454 3.64625 3.68423 3.77965 3.87067 3.90932 3.97764 3.99402 4.09985 4.13186 4.16680 4.18738 4.31660 4.36765 4.42836 4.46489 4.54267 4.57941 4.60757 4.71830 4.77142 4.80004 4.84935 4.86285 4.95172 5.02467 5.08031 5.10844 5.18753 5.26443 5.30346 5.54546 6.02070 6.18716 6.35163 6.59115 6.81059 7.01013 7.74688 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.542 6.542 2 C -0.050 4.050 3 Si 0.667 3.333 4 C -0.232 4.232 5 C 0.141 3.859 6 N -0.731 5.731 7 C 0.135 3.865 8 C 0.515 3.485 9 O -0.530 6.530 10 N -0.723 5.723 11 C 0.144 3.856 12 H 0.090 0.910 13 C -0.126 4.126 14 C -0.107 4.107 15 C -0.003 4.003 16 H 0.110 0.890 17 C 0.186 3.814 18 N -0.291 5.291 19 N -0.296 5.296 20 C 0.154 3.846 21 N -0.581 5.581 22 C -0.115 4.115 23 C -0.127 4.127 24 C -0.126 4.126 25 C -0.053 4.053 26 H 0.373 0.627 27 H 0.067 0.933 28 H -0.265 1.265 29 H -0.259 1.259 30 H 0.134 0.866 31 H 0.409 0.591 32 H 0.090 0.910 33 H 0.404 0.596 34 H 0.077 0.923 35 H 0.077 0.923 36 H 0.067 0.933 37 H 0.080 0.920 38 H 0.223 0.777 39 H 0.429 0.571 40 H 0.075 0.925 41 H 0.064 0.936 42 H 0.072 0.928 43 H 0.075 0.925 44 H 0.078 0.922 45 H 0.079 0.921 46 H 0.068 0.932 47 H 0.074 0.926 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.172 2.221 -1.948 3.178 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.348 6.348 2 C -0.161 4.161 3 Si 0.570 3.430 4 C -0.242 4.242 5 C 0.021 3.979 6 N -0.364 5.364 7 C 0.026 3.974 8 C 0.300 3.700 9 O -0.405 6.405 10 N -0.374 5.374 11 C 0.040 3.960 12 H 0.108 0.892 13 C -0.164 4.164 14 C -0.146 4.146 15 C -0.024 4.024 16 H 0.128 0.872 17 C -0.084 4.084 18 N -0.131 5.131 19 N -0.135 5.135 20 C -0.135 4.135 21 N -0.194 5.194 22 C -0.153 4.153 23 C -0.166 4.166 24 C -0.165 4.165 25 C -0.090 4.090 26 H 0.220 0.780 27 H 0.085 0.915 28 H -0.190 1.190 29 H -0.185 1.185 30 H 0.151 0.849 31 H 0.246 0.754 32 H 0.107 0.893 33 H 0.238 0.762 34 H 0.095 0.905 35 H 0.096 0.904 36 H 0.085 0.915 37 H 0.099 0.901 38 H 0.239 0.761 39 H 0.269 0.731 40 H 0.093 0.907 41 H 0.083 0.917 42 H 0.091 0.909 43 H 0.093 0.907 44 H 0.097 0.903 45 H 0.097 0.903 46 H 0.086 0.914 47 H 0.092 0.908 Dipole moment (debyes) X Y Z Total from point charges 1.162 1.511 -0.718 2.037 hybrid contribution -0.415 1.559 -0.841 1.820 sum 0.747 3.071 -1.559 3.524 Atomic orbital electron populations 1.86618 1.18932 1.79904 1.49356 1.24559 0.83599 1.09330 0.98646 0.95363 0.92106 0.75796 0.79761 1.19923 1.12105 0.95402 0.96798 1.20394 0.95536 0.96209 0.85803 1.44228 1.54976 1.12346 1.24841 1.21004 0.97296 0.84477 0.94637 1.20618 0.87713 0.80179 0.81482 1.90730 1.22711 1.59982 1.67084 1.46009 1.20966 1.31045 1.39429 1.21054 0.90701 0.96164 0.88131 0.89188 1.21810 0.98165 1.00364 0.96056 1.21529 0.96892 0.98234 0.97913 1.19782 0.93070 0.98568 0.90987 0.87150 1.24855 0.89271 0.93121 1.01123 1.74303 1.18025 1.13741 1.07048 1.74311 1.00759 1.21157 1.17275 1.26591 1.02630 0.88864 0.95405 1.44137 1.20366 1.21733 1.33153 1.21609 0.98101 0.99572 0.96063 1.21903 0.97469 0.99066 0.98141 1.21882 1.01881 0.98579 0.94116 1.19959 0.98595 0.91646 0.98806 0.77992 0.91546 1.19003 1.18470 0.84898 0.75389 0.89258 0.76180 0.90466 0.90434 0.91473 0.90095 0.76102 0.73134 0.90669 0.91697 0.90895 0.90652 0.90341 0.90266 0.91363 0.90769 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.85 12.86 -35.23 -0.45 -1.30 16 2 C -0.05 -0.01 2.80 36.01 0.10 0.09 16 3 Si 0.67 -0.33 29.92 -169.99 -5.09 -5.42 16 4 C -0.23 -0.16 5.40 -101.34 -0.55 -0.71 16 5 C 0.14 0.05 9.62 -16.08 -0.15 -0.10 16 6 N -0.73 -0.03 5.47 -55.35 -0.30 -0.34 16 7 C 0.14 -0.16 3.36 -68.52 -0.23 -0.39 16 8 C 0.51 -0.28 7.05 -10.98 -0.08 -0.35 16 9 O -0.53 -1.58 15.75 5.55 0.09 -1.49 16 10 N -0.72 2.28 5.08 -53.81 -0.27 2.00 16 11 C 0.14 -0.43 2.45 -67.94 -0.17 -0.60 16 12 H 0.09 -0.11 7.58 -51.93 -0.39 -0.50 16 13 C -0.13 0.53 5.39 -26.73 -0.14 0.38 16 14 C -0.11 0.34 5.19 -26.73 -0.14 0.20 16 15 C 0.00 0.01 2.66 -91.78 -0.24 -0.24 16 16 H 0.11 -0.24 8.14 -51.93 -0.42 -0.66 16 17 C 0.19 0.07 6.99 -154.99 -1.08 -1.01 16 18 N -0.29 -1.31 12.21 32.79 0.40 -0.91 16 19 N -0.30 -1.32 12.21 29.69 0.36 -0.96 16 20 C 0.15 -0.04 13.19 -89.94 -1.19 -1.23 16 21 N -0.58 1.12 5.96 -11.36 -0.07 1.05 16 22 C -0.11 0.39 4.97 -26.70 -0.13 0.26 16 23 C -0.13 0.38 5.50 -26.70 -0.15 0.23 16 24 C -0.13 0.20 5.48 -26.43 -0.14 0.06 16 25 C -0.05 0.02 5.85 -28.11 -0.16 -0.15 16 26 H 0.37 -0.77 8.74 45.56 0.40 -0.37 16 27 H 0.07 -0.07 7.96 -51.94 -0.41 -0.48 16 28 H -0.26 -0.48 7.11 56.52 0.40 -0.08 16 29 H -0.26 -0.61 6.88 56.52 0.39 -0.23 16 30 H 0.13 -0.08 4.34 -52.49 -0.23 -0.31 16 31 H 0.41 -0.01 8.10 -40.82 -0.33 -0.34 16 32 H 0.09 -0.19 8.14 -51.93 -0.42 -0.61 16 33 H 0.40 -2.20 8.60 -40.82 -0.35 -2.55 16 34 H 0.08 -0.38 8.14 -51.93 -0.42 -0.80 16 35 H 0.08 -0.32 8.14 -51.93 -0.42 -0.74 16 36 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 37 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 38 H 0.22 -1.01 8.06 -52.49 -0.42 -1.44 16 39 H 0.43 -2.25 8.28 -40.82 -0.34 -2.59 16 40 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 41 H 0.06 -0.26 7.52 -51.93 -0.39 -0.65 16 42 H 0.07 -0.25 8.14 -51.93 -0.42 -0.67 16 43 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 44 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 45 H 0.08 -0.27 8.14 -51.93 -0.42 -0.69 16 46 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 47 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 LS Contribution 374.35 15.07 5.64 5.64 Total: 0.00 -11.37 374.35 -11.33 -22.70 By element: Atomic # 1 Polarization: -10.23 SS G_CDS: -7.18 Total: -17.41 kcal Atomic # 6 Polarization: 0.90 SS G_CDS: -4.46 Total: -3.56 kcal Atomic # 7 Polarization: 0.72 SS G_CDS: 0.12 Total: 0.84 kcal Atomic # 8 Polarization: -2.42 SS G_CDS: -0.37 Total: -2.79 kcal Atomic # 14 Polarization: -0.33 SS G_CDS: -5.09 Total: -5.42 kcal Total LS contribution 5.64 Total: 5.64 kcal Total: -11.37 -11.33 -22.70 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16624780_15413834.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 45.939 kcal (2) G-P(sol) polarization free energy of solvation -11.371 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 34.568 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.326 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.697 kcal (6) G-S(sol) free energy of system = (1) + (5) 23.242 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds