Wall clock time and date at job start Sun Mar 7 2021 05:35:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42908 * 1 3 3 Si 1.86300 * 109.46964 * 2 1 4 4 C 1.50696 * 109.47374 * 239.99663 * 2 1 3 5 5 C 1.31119 * 118.54395 * 110.41332 * 4 2 1 6 6 N 1.38931 * 121.84672 * 179.61406 * 5 4 2 7 7 C 1.47026 * 118.88220 * 13.29955 * 6 5 4 8 8 C 1.53493 * 107.50800 * 316.25039 * 7 6 5 9 9 C 1.50195 * 118.54999 * 290.39688 * 4 2 1 10 10 C 1.50706 * 109.32915 * 320.31164 * 9 4 2 11 11 O 1.21273 * 119.99940 * 276.77002 * 10 9 4 12 12 N 1.34774 * 119.99887 * 96.77014 * 10 9 4 13 13 C 1.46498 * 119.99782 * 174.80844 * 12 10 9 14 14 H 1.08997 * 109.47387 * 35.00675 * 13 12 10 15 15 C 1.53002 * 109.47065 * 154.99587 * 13 12 10 16 16 C 1.53001 * 109.47471 * 179.97438 * 15 13 12 17 17 C 1.52997 * 109.47452 * 300.00902 * 16 15 13 18 18 H 1.09002 * 109.46670 * 299.99315 * 17 16 15 19 19 C 1.50701 * 109.47160 * 179.97438 * 17 16 15 20 20 N 1.30516 * 126.34422 * 95.00002 * 19 17 16 21 21 N 1.28598 * 109.66893 * 179.97438 * 20 19 17 22 22 C 1.30512 * 109.67519 * 0.02562 * 21 20 19 23 23 N 1.35487 * 126.34592 * 274.99641 * 19 17 16 24 24 C 1.52997 * 109.47225 * 59.99282 * 17 16 15 25 25 C 1.52998 * 109.47547 * 274.99681 * 13 12 10 26 26 H 0.96701 * 113.99764 * 60.00280 * 1 2 3 27 27 H 1.09003 * 109.46670 * 119.99889 * 2 1 3 28 28 H 1.48502 * 109.99912 * 298.67581 * 3 2 1 29 29 H 1.48503 * 109.99838 * 59.99588 * 3 2 1 30 30 H 1.08005 * 119.07636 * 359.59937 * 5 4 2 31 31 H 0.96993 * 120.55362 * 193.27650 * 6 5 4 32 32 H 1.09007 * 109.82190 * 75.87035 * 7 6 5 33 33 H 1.08998 * 109.82007 * 196.73036 * 7 6 5 34 34 H 1.08998 * 109.75113 * 301.40482 * 8 7 6 35 35 H 1.08993 * 109.46769 * 180.85742 * 8 7 6 36 36 H 1.09009 * 109.33317 * 79.96250 * 9 4 2 37 37 H 0.97000 * 120.00022 * 354.81156 * 12 10 9 38 38 H 1.09007 * 109.46630 * 60.00468 * 15 13 12 39 39 H 1.09001 * 109.47519 * 300.00494 * 15 13 12 40 40 H 1.08999 * 109.47450 * 180.02562 * 16 15 13 41 41 H 1.09002 * 109.46624 * 60.00245 * 16 15 13 42 42 H 1.08004 * 126.35120 * 179.97438 * 22 21 20 43 43 H 0.97007 * 126.97935 * 0.26415 * 23 19 17 44 44 H 1.09002 * 109.47270 * 60.00400 * 24 17 16 45 45 H 1.09001 * 109.47225 * 180.02562 * 24 17 16 46 46 H 1.08992 * 109.47184 * 300.00670 * 25 13 12 47 47 H 1.09011 * 109.46529 * 60.00252 * 25 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9315 -0.7105 -1.2304 5 6 2.5191 -0.0040 -2.1657 6 7 3.0148 -0.5894 -3.3240 7 6 2.6235 -1.9697 -3.6457 8 6 2.7127 -2.7887 -2.3506 9 6 1.7373 -2.1964 -1.3308 10 6 1.9830 -2.8238 0.0172 11 8 3.1147 -3.0803 0.3694 12 7 0.9450 -3.0999 0.8313 13 6 1.1715 -3.8123 2.0912 14 1 2.1314 -3.5118 2.5110 15 6 0.0538 -3.4704 3.0785 16 6 0.2900 -4.2149 4.3941 17 6 0.2964 -5.7224 4.1331 18 1 -0.6636 -6.0225 3.7131 19 6 0.5297 -6.4556 5.4288 20 7 -0.3885 -6.9453 6.2166 21 7 0.1665 -7.5054 7.2325 22 6 1.4638 -7.3979 7.1392 23 7 1.7314 -6.7287 5.9919 24 6 1.4142 -6.0643 3.1458 25 6 1.1782 -5.3199 1.8306 26 1 -0.3933 0.4417 -0.7651 27 1 1.7923 -0.5138 0.8900 28 1 1.5880 2.4585 -1.2243 29 1 1.5614 2.4679 1.2085 30 1 2.6204 1.0629 -2.0320 31 1 3.6088 -0.0957 -3.9107 32 1 1.6021 -1.9852 -4.0262 33 1 3.3023 -2.3818 -4.3924 34 1 3.7275 -2.7435 -1.9554 35 1 2.4429 -3.8244 -2.5565 36 1 0.7149 -2.4063 -1.6455 37 1 0.0479 -2.8269 0.5829 38 1 -0.9063 -3.7709 2.6587 39 1 0.0489 -2.3963 3.2642 40 1 -0.5065 -3.9717 5.0973 41 1 1.2500 -3.9148 4.8140 42 1 2.1897 -7.7728 7.8457 43 1 2.6056 -6.4900 5.6459 44 1 2.3742 -5.7642 3.5657 45 1 1.4185 -7.1382 2.9594 46 1 0.2183 -5.6204 1.4108 47 1 1.9746 -5.5635 1.1272 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16624780_15608500.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:35:37 Heat of formation + Delta-G solvation = 22.283351 kcal Electronic energy + Delta-G solvation = -29671.845416 eV Core-core repulsion = 25664.076622 eV Total energy + Delta-G solvation = -4007.768793 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 334.179 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -44.07967 -41.52156 -40.08379 -38.80097 -37.64111 -35.58323 -34.51102 -33.59947 -32.85227 -32.17365 -31.99376 -29.60638 -27.24706 -26.07710 -24.56380 -24.07484 -23.34645 -23.19713 -22.16978 -21.42743 -21.02174 -19.35320 -19.32772 -19.07911 -17.99435 -17.36582 -17.28808 -16.77419 -16.70381 -16.34227 -16.10661 -15.82237 -15.59332 -15.36175 -15.22898 -15.01663 -14.77019 -14.37863 -14.25395 -14.12724 -13.94142 -13.62559 -13.37864 -13.23060 -12.77629 -12.70327 -12.42467 -12.35452 -12.33385 -12.25765 -11.94487 -11.77338 -11.72677 -11.65308 -11.51679 -11.47693 -11.24472 -10.57200 -10.39142 -10.13617 -9.94614 -8.57246 -4.95247 0.86018 1.20364 1.31996 1.52409 1.80184 1.81535 1.95708 1.96916 2.27073 2.48316 3.13570 3.40487 3.46088 3.55471 3.65786 3.71472 3.78680 3.82447 3.89235 4.02728 4.09915 4.11605 4.24050 4.24231 4.27154 4.28397 4.33388 4.40086 4.46697 4.52463 4.57136 4.63308 4.66707 4.69603 4.72467 4.88356 4.92995 4.96209 4.98543 5.11780 5.14621 5.17723 5.23030 5.23658 5.35230 5.59018 6.08045 6.18972 6.48862 6.62074 6.72365 7.37304 7.80360 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.536 6.536 2 C -0.054 4.054 3 Si 0.673 3.327 4 C -0.273 4.273 5 C 0.152 3.848 6 N -0.748 5.748 7 C 0.122 3.878 8 C -0.127 4.127 9 C -0.034 4.034 10 C 0.531 3.469 11 O -0.539 6.539 12 N -0.724 5.724 13 C 0.143 3.857 14 H 0.089 0.911 15 C -0.125 4.125 16 C -0.106 4.106 17 C -0.003 4.003 18 H 0.110 0.890 19 C 0.187 3.813 20 N -0.292 5.292 21 N -0.296 5.296 22 C 0.153 3.847 23 N -0.581 5.581 24 C -0.114 4.114 25 C -0.126 4.126 26 H 0.373 0.627 27 H 0.106 0.894 28 H -0.262 1.262 29 H -0.259 1.259 30 H 0.134 0.866 31 H 0.404 0.596 32 H 0.061 0.939 33 H 0.083 0.917 34 H 0.087 0.913 35 H 0.075 0.925 36 H 0.085 0.915 37 H 0.404 0.596 38 H 0.074 0.926 39 H 0.077 0.923 40 H 0.079 0.921 41 H 0.066 0.934 42 H 0.222 0.778 43 H 0.429 0.571 44 H 0.064 0.936 45 H 0.073 0.927 46 H 0.070 0.930 47 H 0.072 0.928 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.918 2.273 -5.770 7.335 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.342 6.342 2 C -0.165 4.165 3 Si 0.575 3.425 4 C -0.284 4.284 5 C 0.030 3.970 6 N -0.378 5.378 7 C -0.003 4.003 8 C -0.166 4.166 9 C -0.055 4.055 10 C 0.317 3.683 11 O -0.416 6.416 12 N -0.376 5.376 13 C 0.038 3.962 14 H 0.107 0.893 15 C -0.163 4.163 16 C -0.145 4.145 17 C -0.024 4.024 18 H 0.128 0.872 19 C -0.082 4.082 20 N -0.132 5.132 21 N -0.136 5.136 22 C -0.136 4.136 23 N -0.194 5.194 24 C -0.153 4.153 25 C -0.165 4.165 26 H 0.220 0.780 27 H 0.124 0.876 28 H -0.187 1.187 29 H -0.184 1.184 30 H 0.151 0.849 31 H 0.238 0.762 32 H 0.079 0.921 33 H 0.101 0.899 34 H 0.106 0.894 35 H 0.094 0.906 36 H 0.103 0.897 37 H 0.239 0.761 38 H 0.093 0.907 39 H 0.096 0.904 40 H 0.097 0.903 41 H 0.085 0.915 42 H 0.239 0.761 43 H 0.269 0.731 44 H 0.083 0.917 45 H 0.092 0.908 46 H 0.089 0.911 47 H 0.091 0.909 Dipole moment (debyes) X Y Z Total from point charges 3.035 2.031 -4.352 5.681 hybrid contribution 0.501 0.514 -1.351 1.530 sum 3.536 2.545 -5.704 7.177 Atomic orbital electron populations 1.86545 1.18483 1.79866 1.49265 1.24725 0.83433 1.09807 0.98509 0.95066 0.92189 0.75307 0.79892 1.20399 1.15355 0.93811 0.98818 1.20504 0.93507 0.96446 0.86543 1.44572 1.53852 1.14823 1.24505 1.21603 1.00435 0.81680 0.96587 1.21815 1.01113 0.98900 0.94726 1.19609 1.00651 0.92646 0.92641 1.20465 0.84676 0.77011 0.86137 1.90684 1.22374 1.53058 1.75442 1.46136 1.11016 1.59060 1.21355 1.20981 0.99996 0.91168 0.84053 0.89331 1.21790 0.98659 1.01215 0.94608 1.21532 1.03164 0.92211 0.97636 1.19787 1.01739 0.93970 0.86905 0.87231 1.24874 0.81638 1.02299 0.99374 1.74305 1.25973 1.12387 1.00564 1.74299 1.04377 1.18009 1.16886 1.26574 0.96944 0.99549 0.90511 1.44136 1.10724 1.44568 1.19945 1.21586 0.97537 1.01034 0.95122 1.21884 1.03038 0.94576 0.97005 0.78020 0.87566 1.18725 1.18397 0.84945 0.76192 0.92090 0.89853 0.89433 0.90594 0.89685 0.76071 0.90711 0.90427 0.90263 0.91530 0.76135 0.73119 0.91725 0.90819 0.91085 0.90881 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.22 12.88 -35.23 -0.45 -0.23 16 2 C -0.05 0.02 2.40 36.00 0.09 0.11 16 3 Si 0.67 -0.60 29.95 -169.99 -5.09 -5.69 16 4 C -0.27 0.16 5.03 -101.34 -0.51 -0.35 16 5 C 0.15 -0.21 9.61 -16.08 -0.15 -0.37 16 6 N -0.75 1.73 5.83 -60.70 -0.35 1.38 16 7 C 0.12 -0.31 7.16 -3.50 -0.03 -0.33 16 8 C -0.13 0.11 5.31 -26.45 -0.14 -0.03 16 9 C -0.03 0.01 2.69 -93.14 -0.25 -0.24 16 10 C 0.53 0.65 5.22 -10.98 -0.06 0.59 16 11 O -0.54 -2.53 15.75 5.56 0.09 -2.45 16 12 N -0.72 0.58 5.07 -53.81 -0.27 0.31 16 13 C 0.14 -0.17 2.50 -67.93 -0.17 -0.34 16 14 H 0.09 0.05 7.51 -51.93 -0.39 -0.34 16 15 C -0.12 0.27 5.39 -26.73 -0.14 0.13 16 16 C -0.11 0.19 5.19 -26.73 -0.14 0.05 16 17 C 0.00 0.00 2.66 -91.77 -0.24 -0.24 16 18 H 0.11 -0.11 8.14 -51.93 -0.42 -0.53 16 19 C 0.19 0.23 6.99 -155.00 -1.08 -0.85 16 20 N -0.29 -1.54 12.21 32.79 0.40 -1.14 16 21 N -0.30 -1.51 12.21 29.69 0.36 -1.15 16 22 C 0.15 0.05 13.19 -89.95 -1.19 -1.14 16 23 N -0.58 0.70 5.96 -11.37 -0.07 0.63 16 24 C -0.11 0.26 4.97 -26.76 -0.13 0.13 16 25 C -0.13 0.20 5.49 -26.76 -0.15 0.06 16 26 H 0.37 -1.10 8.70 45.56 0.40 -0.70 16 27 H 0.11 0.10 6.88 -51.93 -0.36 -0.26 16 28 H -0.26 -0.07 6.84 56.52 0.39 0.31 16 29 H -0.26 -0.70 7.11 56.52 0.40 -0.30 16 30 H 0.13 -0.34 4.31 -52.48 -0.23 -0.57 16 31 H 0.40 -1.65 8.96 -40.82 -0.37 -2.01 16 32 H 0.06 -0.16 8.14 -51.92 -0.42 -0.59 16 33 H 0.08 -0.32 8.14 -51.93 -0.42 -0.74 16 34 H 0.09 0.12 7.52 -51.93 -0.39 -0.27 16 35 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 36 H 0.09 -0.12 8.11 -51.92 -0.42 -0.54 16 37 H 0.40 -0.80 8.58 -40.82 -0.35 -1.15 16 38 H 0.07 -0.20 8.14 -51.92 -0.42 -0.62 16 39 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 40 H 0.08 -0.06 8.14 -51.93 -0.42 -0.48 16 41 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 42 H 0.22 -0.89 8.06 -52.48 -0.42 -1.32 16 43 H 0.43 -1.95 8.29 -40.82 -0.34 -2.29 16 44 H 0.06 -0.19 7.52 -51.93 -0.39 -0.58 16 45 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 46 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 47 H 0.07 0.00 8.14 -51.92 -0.42 -0.42 16 LS Contribution 371.59 15.07 5.60 5.60 Total: 0.00 -10.54 371.59 -11.20 -21.74 By element: Atomic # 1 Polarization: -9.05 SS G_CDS: -7.12 Total: -16.17 kcal Atomic # 6 Polarization: 1.47 SS G_CDS: -4.30 Total: -2.83 kcal Atomic # 7 Polarization: -0.04 SS G_CDS: 0.07 Total: 0.02 kcal Atomic # 8 Polarization: -2.31 SS G_CDS: -0.37 Total: -2.68 kcal Atomic # 14 Polarization: -0.60 SS G_CDS: -5.09 Total: -5.69 kcal Total LS contribution 5.60 Total: 5.60 kcal Total: -10.54 -11.20 -21.74 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16624780_15608500.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 44.024 kcal (2) G-P(sol) polarization free energy of solvation -10.537 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 33.488 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.204 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.741 kcal (6) G-S(sol) free energy of system = (1) + (5) 22.283 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds