Wall clock time and date at job start Sun Mar 7 2021 05:35:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86306 * 109.47070 * 2 1 4 4 C 1.50700 * 109.47559 * 120.00084 * 2 1 3 5 5 C 1.38269 * 119.94122 * 65.00104 * 4 2 1 6 6 C 1.38147 * 120.05332 * 180.02562 * 5 4 2 7 7 C 1.38730 * 119.94517 * 359.97438 * 6 5 4 8 8 O 1.35897 * 120.05458 * 180.02562 * 7 6 5 9 9 C 1.42903 * 117.00109 * 180.02562 * 8 7 6 10 10 C 1.50701 * 109.47347 * 179.97438 * 9 8 7 11 11 O 1.21275 * 119.99632 * 359.97438 * 10 9 8 12 12 N 1.34778 * 119.99875 * 179.97438 * 10 9 8 13 13 C 1.46497 * 119.99664 * 179.97438 * 12 10 9 14 14 H 1.09002 * 109.46915 * 35.00835 * 13 12 10 15 15 C 1.53002 * 109.46729 * 155.00120 * 13 12 10 16 16 C 1.52997 * 109.46978 * 179.97438 * 15 13 12 17 17 C 1.53002 * 109.47415 * 300.00098 * 16 15 13 18 18 H 1.09002 * 109.47070 * 300.00053 * 17 16 15 19 19 C 1.50701 * 109.47419 * 179.97438 * 17 16 15 20 20 N 1.30518 * 126.34898 * 95.02105 * 19 17 16 21 21 N 1.28594 * 109.67538 * 179.97438 * 20 19 17 22 22 C 1.30515 * 109.67255 * 0.02562 * 21 20 19 23 23 N 1.35491 * 107.30770 * 359.76629 * 22 21 20 24 24 C 1.52997 * 109.46817 * 59.99873 * 17 16 15 25 25 C 1.52992 * 109.47482 * 300.00014 * 24 17 16 26 26 C 1.38738 * 119.88847 * 0.27725 * 7 6 5 27 27 C 1.38143 * 119.93870 * 359.42631 * 26 7 6 28 28 H 0.96702 * 113.99898 * 299.99641 * 1 2 3 29 29 H 1.08996 * 109.47026 * 240.00333 * 2 1 3 30 30 H 1.48502 * 110.00070 * 178.68328 * 3 2 1 31 31 H 1.48496 * 109.99688 * 300.00435 * 3 2 1 32 32 H 1.07999 * 119.97317 * 0.02562 * 5 4 2 33 33 H 1.07996 * 120.02331 * 179.97438 * 6 5 4 34 34 H 1.09006 * 109.46975 * 59.99475 * 9 8 7 35 35 H 1.09006 * 109.47096 * 300.00297 * 9 8 7 36 36 H 0.97000 * 119.99923 * 0.02562 * 12 10 9 37 37 H 1.09002 * 109.47097 * 60.00183 * 15 13 12 38 38 H 1.08998 * 109.47844 * 300.00398 * 15 13 12 39 39 H 1.09000 * 109.47140 * 180.02562 * 16 15 13 40 40 H 1.09002 * 109.47497 * 60.00450 * 16 15 13 41 41 H 1.08002 * 126.34709 * 179.97438 * 22 21 20 42 42 H 0.97001 * 126.98579 * 180.22300 * 23 22 21 43 43 H 1.09002 * 109.47153 * 60.00231 * 24 17 16 44 44 H 1.08998 * 109.47533 * 179.97438 * 24 17 16 45 45 H 1.09002 * 109.47103 * 300.00247 * 25 24 17 46 46 H 1.08996 * 109.47747 * 179.97438 * 25 24 17 47 47 H 1.07990 * 120.02552 * 179.72023 * 26 7 6 48 48 H 1.08000 * 119.96683 * 180.31871 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 1.6841 -2.0606 1.3971 6 6 2.1432 -2.7140 2.5244 7 6 2.8533 -2.0145 3.4893 8 8 3.3063 -2.6552 4.5989 9 6 4.0294 -1.8719 5.5505 10 6 4.4484 -2.7450 6.7052 11 8 4.1561 -3.9219 6.7126 12 7 5.1479 -2.2178 7.7295 13 6 5.5547 -3.0664 8.8522 14 1 5.7898 -4.0657 8.4857 15 6 6.7912 -2.4655 9.5238 16 6 7.2156 -3.3515 10.6967 17 6 6.0740 -3.4354 11.7119 18 1 5.8390 -2.4359 12.0779 19 6 6.4918 -4.3085 12.8669 20 7 7.0048 -3.9037 13.9967 21 7 7.2411 -4.9168 14.7526 22 6 6.8902 -6.0140 14.1392 23 7 6.4002 -5.6590 12.9269 24 6 4.8376 -4.0362 11.0402 25 6 4.4130 -3.1503 9.8674 26 6 3.0955 -0.6587 3.3222 27 6 2.6396 -0.0113 2.1902 28 1 -0.3933 0.4417 0.7651 29 1 1.7923 -0.5138 -0.8900 30 1 3.5346 1.7704 0.0321 31 1 1.5613 2.4679 -1.2084 32 1 1.1317 -2.6047 0.6454 33 1 1.9494 -3.7684 2.6543 34 1 3.3929 -1.0663 5.9168 35 1 4.9142 -1.4482 5.0751 36 1 5.3814 -1.2763 7.7237 37 1 6.5561 -1.4662 9.8902 38 1 7.6044 -2.4052 8.8006 39 1 8.0962 -2.9232 11.1755 40 1 7.4506 -4.3509 10.3308 41 1 6.9719 -7.0185 14.5274 42 1 6.0554 -6.2515 12.2405 43 1 5.0725 -5.0357 10.6742 44 1 4.0243 -4.0965 11.7634 45 1 4.1781 -2.1509 10.2334 46 1 3.5325 -3.5786 9.3886 47 1 3.6441 -0.1111 4.0741 48 1 2.8324 1.0430 2.0572 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16624780_2989410.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:35:50 Heat of formation + Delta-G solvation = -3.234531 kcal Electronic energy + Delta-G solvation = -30548.874437 eV Core-core repulsion = 26185.828162 eV Total energy + Delta-G solvation = -4363.046275 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 359.168 amu Computer time = 1.13 seconds Orbital eigenvalues (eV) -44.14192 -41.68235 -40.97287 -39.62478 -38.84273 -37.15793 -35.84314 -34.60776 -32.80688 -32.31478 -32.13109 -31.79347 -30.37759 -28.86516 -26.27953 -24.89389 -24.29896 -23.96432 -23.36203 -22.47692 -22.16043 -21.68899 -21.09496 -19.57679 -19.39715 -18.59784 -18.16714 -17.55426 -17.41311 -16.95459 -16.82353 -16.54988 -16.38815 -16.21197 -15.91523 -15.71591 -15.60625 -15.27517 -15.18049 -14.90248 -14.71158 -14.30549 -14.27408 -13.97151 -13.81221 -13.61336 -13.54479 -13.45161 -12.88935 -12.57766 -12.48896 -12.37722 -12.26278 -12.16502 -12.09004 -11.90020 -11.83110 -11.79889 -11.65510 -11.33078 -10.96580 -10.44832 -10.30535 -10.19822 -10.09981 -9.27559 -5.08878 0.23720 0.24520 0.79639 1.26135 1.33038 1.38012 1.58703 1.75406 1.90905 1.94004 2.43385 2.60743 3.04034 3.26759 3.39390 3.42694 3.45777 3.61856 3.63154 3.67941 3.77356 3.79161 3.81303 3.82430 3.89500 3.96528 4.08171 4.11844 4.15472 4.21143 4.30937 4.38022 4.41262 4.45923 4.46259 4.56362 4.59601 4.75367 4.78683 4.83699 4.84646 4.89738 5.01020 5.06178 5.09299 5.10235 5.19170 5.24451 5.45659 5.62348 6.01879 6.13837 6.28307 6.55539 6.98045 7.74316 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.541 6.541 2 C -0.063 4.063 3 Si 0.684 3.316 4 C -0.157 4.157 5 C -0.051 4.051 6 C -0.145 4.145 7 C 0.134 3.866 8 O -0.288 6.288 9 C 0.039 3.961 10 C 0.517 3.483 11 O -0.512 6.512 12 N -0.724 5.724 13 C 0.145 3.855 14 H 0.091 0.909 15 C -0.125 4.125 16 C -0.107 4.107 17 C -0.003 4.003 18 H 0.111 0.889 19 C 0.185 3.815 20 N -0.290 5.290 21 N -0.296 5.296 22 C 0.155 3.845 23 N -0.581 5.581 24 C -0.115 4.115 25 C -0.128 4.128 26 C -0.206 4.206 27 C -0.074 4.074 28 H 0.379 0.621 29 H 0.113 0.887 30 H -0.258 1.258 31 H -0.255 1.255 32 H 0.134 0.866 33 H 0.136 0.864 34 H 0.096 0.904 35 H 0.095 0.905 36 H 0.403 0.597 37 H 0.077 0.923 38 H 0.078 0.922 39 H 0.081 0.919 40 H 0.067 0.933 41 H 0.223 0.777 42 H 0.429 0.571 43 H 0.065 0.935 44 H 0.075 0.925 45 H 0.073 0.927 46 H 0.075 0.925 47 H 0.132 0.868 48 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.149 2.739 -0.527 2.793 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.346 6.346 2 C -0.174 4.174 3 Si 0.586 3.414 4 C -0.158 4.158 5 C -0.069 4.069 6 C -0.164 4.164 7 C 0.088 3.912 8 O -0.201 6.201 9 C -0.040 4.040 10 C 0.302 3.698 11 O -0.385 6.385 12 N -0.378 5.378 13 C 0.041 3.959 14 H 0.109 0.891 15 C -0.163 4.163 16 C -0.146 4.146 17 C -0.024 4.024 18 H 0.129 0.871 19 C -0.084 4.084 20 N -0.131 5.131 21 N -0.135 5.135 22 C -0.135 4.135 23 N -0.194 5.194 24 C -0.154 4.154 25 C -0.167 4.167 26 C -0.225 4.225 27 C -0.092 4.092 28 H 0.226 0.774 29 H 0.130 0.870 30 H -0.183 1.183 31 H -0.180 1.180 32 H 0.152 0.848 33 H 0.153 0.847 34 H 0.114 0.886 35 H 0.113 0.887 36 H 0.238 0.762 37 H 0.095 0.905 38 H 0.096 0.904 39 H 0.099 0.901 40 H 0.086 0.914 41 H 0.239 0.761 42 H 0.269 0.731 43 H 0.084 0.916 44 H 0.094 0.906 45 H 0.091 0.909 46 H 0.094 0.906 47 H 0.150 0.850 48 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges 0.790 2.960 -0.231 3.072 hybrid contribution -0.314 -1.294 -1.318 1.874 sum 0.476 1.666 -1.549 2.324 Atomic orbital electron populations 1.86509 1.17162 1.81700 1.49228 1.24979 0.85194 1.09882 0.97392 0.94879 0.80945 0.78171 0.87362 1.20257 1.02497 0.95191 0.97815 1.20868 0.96347 0.93474 0.96199 1.20534 1.01226 1.01073 0.93563 1.19070 0.94377 0.90999 0.86734 1.86170 1.68544 1.36595 1.28758 1.22486 0.97936 0.94061 0.89488 1.20039 0.78391 0.88459 0.82928 1.90783 1.53108 1.16203 1.78437 1.45877 1.57324 1.13696 1.20897 1.21067 0.93848 0.95577 0.85372 0.89053 1.21807 0.97034 0.99947 0.97546 1.21532 0.97684 1.00801 0.94585 1.19781 0.95493 0.97994 0.89115 0.87140 1.24850 1.02651 0.82196 0.98720 1.74302 1.15866 1.22667 1.00274 1.74307 1.19191 0.95120 1.24910 1.26591 1.00562 1.02320 0.83979 1.44139 1.49238 1.08707 1.17289 1.21600 0.96926 0.99290 0.97567 1.21903 0.98743 1.00828 0.95210 1.21171 1.06920 0.93634 1.00757 1.20767 0.96408 0.99014 0.92984 0.77399 0.87007 1.18324 1.17957 0.84797 0.84655 0.88605 0.88716 0.76234 0.90453 0.90383 0.90054 0.91425 0.76096 0.73109 0.91648 0.90621 0.90858 0.90590 0.85018 0.85270 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.01 12.83 -35.23 -0.45 -0.46 16 2 C -0.06 0.03 2.80 36.01 0.10 0.14 16 3 Si 0.68 -1.03 29.80 -169.99 -5.07 -6.10 16 4 C -0.16 0.04 5.35 -104.60 -0.56 -0.52 16 5 C -0.05 -0.02 9.68 -39.60 -0.38 -0.41 16 6 C -0.15 -0.17 9.99 -39.43 -0.39 -0.56 16 7 C 0.13 0.12 6.69 -39.21 -0.26 -0.14 16 8 O -0.29 -0.52 9.67 -39.33 -0.38 -0.90 16 9 C 0.04 -0.09 5.22 36.01 0.19 0.10 16 10 C 0.52 -0.15 7.87 -10.98 -0.09 -0.23 16 11 O -0.51 -2.37 16.16 -14.35 -0.23 -2.60 16 12 N -0.72 2.59 5.08 -53.81 -0.27 2.32 16 13 C 0.15 -0.45 2.46 -67.93 -0.17 -0.62 16 14 H 0.09 -0.10 7.58 -51.93 -0.39 -0.50 16 15 C -0.13 0.57 5.39 -26.73 -0.14 0.43 16 16 C -0.11 0.36 5.19 -26.73 -0.14 0.22 16 17 C 0.00 0.01 2.66 -91.77 -0.24 -0.24 16 18 H 0.11 -0.27 8.14 -51.93 -0.42 -0.69 16 19 C 0.19 0.05 6.99 -154.99 -1.08 -1.03 16 20 N -0.29 -1.28 12.21 32.80 0.40 -0.88 16 21 N -0.30 -1.30 12.21 29.69 0.36 -0.94 16 22 C 0.15 -0.05 13.19 -89.95 -1.19 -1.23 16 23 N -0.58 1.13 5.96 -11.36 -0.07 1.06 16 24 C -0.11 0.39 4.97 -26.74 -0.13 0.26 16 25 C -0.13 0.39 5.49 -26.73 -0.15 0.24 16 26 C -0.21 0.24 9.04 -39.43 -0.36 -0.12 16 27 C -0.07 0.09 8.66 -39.61 -0.34 -0.25 16 28 H 0.38 -1.46 8.70 45.56 0.40 -1.06 16 29 H 0.11 -0.01 7.96 -51.93 -0.41 -0.42 16 30 H -0.26 -0.20 7.11 56.52 0.40 0.20 16 31 H -0.25 -0.49 7.11 56.52 0.40 -0.09 16 32 H 0.13 -0.04 8.06 -52.49 -0.42 -0.46 16 33 H 0.14 0.10 8.06 -52.49 -0.42 -0.32 16 34 H 0.10 -0.46 7.65 -51.93 -0.40 -0.86 16 35 H 0.10 -0.44 7.67 -51.93 -0.40 -0.83 16 36 H 0.40 -2.68 8.60 -40.82 -0.35 -3.04 16 37 H 0.08 -0.42 8.14 -51.93 -0.42 -0.84 16 38 H 0.08 -0.36 8.14 -51.93 -0.42 -0.78 16 39 H 0.08 -0.19 8.14 -51.93 -0.42 -0.62 16 40 H 0.07 -0.23 8.14 -51.93 -0.42 -0.65 16 41 H 0.22 -1.02 8.06 -52.49 -0.42 -1.44 16 42 H 0.43 -2.24 8.28 -40.82 -0.34 -2.58 16 43 H 0.06 -0.26 7.51 -51.93 -0.39 -0.65 16 44 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 45 H 0.07 -0.27 8.14 -51.93 -0.42 -0.69 16 46 H 0.08 -0.07 8.14 -51.93 -0.42 -0.50 16 47 H 0.13 -0.53 6.30 -52.49 -0.33 -0.86 16 48 H 0.13 -0.44 4.90 -52.49 -0.26 -0.70 16 LS Contribution 394.22 15.07 5.94 5.94 Total: 0.00 -13.70 394.22 -11.83 -25.53 By element: Atomic # 1 Polarization: -12.30 SS G_CDS: -6.72 Total: -19.02 kcal Atomic # 6 Polarization: 1.37 SS G_CDS: -5.34 Total: -3.97 kcal Atomic # 7 Polarization: 1.14 SS G_CDS: 0.42 Total: 1.57 kcal Atomic # 8 Polarization: -2.89 SS G_CDS: -1.06 Total: -3.95 kcal Atomic # 14 Polarization: -1.03 SS G_CDS: -5.07 Total: -6.10 kcal Total LS contribution 5.94 Total: 5.94 kcal Total: -13.70 -11.83 -25.53 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16624780_2989410.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 22.297 kcal (2) G-P(sol) polarization free energy of solvation -13.705 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 8.592 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.827 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.531 kcal (6) G-S(sol) free energy of system = (1) + (5) -3.235 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.13 seconds