Wall clock time and date at job start Sun Mar 7 2021 05:35:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86306 * 109.47070 * 2 1 4 4 C 1.50700 * 109.47559 * 120.00084 * 2 1 3 5 5 C 1.38269 * 119.94122 * 65.00104 * 4 2 1 6 6 C 1.38147 * 120.05332 * 180.02562 * 5 4 2 7 7 C 1.38730 * 119.94517 * 359.97438 * 6 5 4 8 8 O 1.35897 * 120.05458 * 180.02562 * 7 6 5 9 9 C 1.42903 * 117.00109 * 180.02562 * 8 7 6 10 10 C 1.50701 * 109.47347 * 179.97438 * 9 8 7 11 11 O 1.21275 * 119.99632 * 359.97438 * 10 9 8 12 12 N 1.34778 * 119.99875 * 179.97438 * 10 9 8 13 13 C 1.46497 * 119.99664 * 179.97438 * 12 10 9 14 14 H 1.09002 * 109.46915 * 35.00835 * 13 12 10 15 15 C 1.53002 * 109.46729 * 155.00120 * 13 12 10 16 16 C 1.52997 * 109.46978 * 179.97438 * 15 13 12 17 17 C 1.53002 * 109.47415 * 300.00098 * 16 15 13 18 18 H 1.09002 * 109.47070 * 300.00053 * 17 16 15 19 19 C 1.50701 * 109.47419 * 179.97438 * 17 16 15 20 20 N 1.30518 * 126.34898 * 95.02105 * 19 17 16 21 21 N 1.28594 * 109.67538 * 179.97438 * 20 19 17 22 22 C 1.30515 * 109.67255 * 0.02562 * 21 20 19 23 23 N 1.35491 * 107.30770 * 359.76629 * 22 21 20 24 24 C 1.52997 * 109.46817 * 59.99873 * 17 16 15 25 25 C 1.52992 * 109.47482 * 300.00014 * 24 17 16 26 26 C 1.38738 * 119.88847 * 0.27725 * 7 6 5 27 27 C 1.38143 * 119.93870 * 359.42631 * 26 7 6 28 28 H 0.96702 * 113.99898 * 299.99641 * 1 2 3 29 29 H 1.08996 * 109.47026 * 240.00333 * 2 1 3 30 30 H 1.48502 * 110.00070 * 178.68328 * 3 2 1 31 31 H 1.48496 * 109.99688 * 300.00435 * 3 2 1 32 32 H 1.07999 * 119.97317 * 0.02562 * 5 4 2 33 33 H 1.07996 * 120.02331 * 179.97438 * 6 5 4 34 34 H 1.09006 * 109.46975 * 59.99475 * 9 8 7 35 35 H 1.09006 * 109.47096 * 300.00297 * 9 8 7 36 36 H 0.97000 * 119.99923 * 0.02562 * 12 10 9 37 37 H 1.09002 * 109.47097 * 60.00183 * 15 13 12 38 38 H 1.08998 * 109.47844 * 300.00398 * 15 13 12 39 39 H 1.09000 * 109.47140 * 180.02562 * 16 15 13 40 40 H 1.09002 * 109.47497 * 60.00450 * 16 15 13 41 41 H 1.08002 * 126.34709 * 179.97438 * 22 21 20 42 42 H 0.97001 * 126.98579 * 180.22300 * 23 22 21 43 43 H 1.09002 * 109.47153 * 60.00231 * 24 17 16 44 44 H 1.08998 * 109.47533 * 179.97438 * 24 17 16 45 45 H 1.09002 * 109.47103 * 300.00247 * 25 24 17 46 46 H 1.08996 * 109.47747 * 179.97438 * 25 24 17 47 47 H 1.07990 * 120.02552 * 179.72023 * 26 7 6 48 48 H 1.08000 * 119.96683 * 180.31871 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 1.6841 -2.0606 1.3971 6 6 2.1432 -2.7140 2.5244 7 6 2.8533 -2.0145 3.4893 8 8 3.3063 -2.6552 4.5989 9 6 4.0294 -1.8719 5.5505 10 6 4.4484 -2.7450 6.7052 11 8 4.1561 -3.9219 6.7126 12 7 5.1479 -2.2178 7.7295 13 6 5.5547 -3.0664 8.8522 14 1 5.7898 -4.0657 8.4857 15 6 6.7912 -2.4655 9.5238 16 6 7.2156 -3.3515 10.6967 17 6 6.0740 -3.4354 11.7119 18 1 5.8390 -2.4359 12.0779 19 6 6.4918 -4.3085 12.8669 20 7 7.0048 -3.9037 13.9967 21 7 7.2411 -4.9168 14.7526 22 6 6.8902 -6.0140 14.1392 23 7 6.4002 -5.6590 12.9269 24 6 4.8376 -4.0362 11.0402 25 6 4.4130 -3.1503 9.8674 26 6 3.0955 -0.6587 3.3222 27 6 2.6396 -0.0113 2.1902 28 1 -0.3933 0.4417 0.7651 29 1 1.7923 -0.5138 -0.8900 30 1 3.5346 1.7704 0.0321 31 1 1.5613 2.4679 -1.2084 32 1 1.1317 -2.6047 0.6454 33 1 1.9494 -3.7684 2.6543 34 1 3.3929 -1.0663 5.9168 35 1 4.9142 -1.4482 5.0751 36 1 5.3814 -1.2763 7.7237 37 1 6.5561 -1.4662 9.8902 38 1 7.6044 -2.4052 8.8006 39 1 8.0962 -2.9232 11.1755 40 1 7.4506 -4.3509 10.3308 41 1 6.9719 -7.0185 14.5274 42 1 6.0554 -6.2515 12.2405 43 1 5.0725 -5.0357 10.6742 44 1 4.0243 -4.0965 11.7634 45 1 4.1781 -2.1509 10.2334 46 1 3.5325 -3.5786 9.3886 47 1 3.6441 -0.1111 4.0741 48 1 2.8324 1.0430 2.0572 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16624780_2989410.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:35:49 Heat of formation + Delta-G solvation = -6.416629 kcal Electronic energy + Delta-G solvation = -30549.012423 eV Core-core repulsion = 26185.828162 eV Total energy + Delta-G solvation = -4363.184261 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 359.168 amu Computer time = 1.21 seconds Orbital eigenvalues (eV) -44.15176 -41.59945 -40.86759 -39.50336 -38.78894 -37.10952 -35.76367 -34.59041 -32.72914 -32.25141 -31.87601 -31.72111 -30.31139 -28.72337 -26.21840 -24.78665 -24.15489 -23.83826 -23.27714 -22.42969 -22.08186 -21.56077 -20.89614 -19.48029 -19.30655 -18.48790 -18.08083 -17.41764 -17.28723 -16.90795 -16.80509 -16.49030 -16.33348 -16.09026 -15.82028 -15.58595 -15.51224 -15.10899 -15.06022 -14.78293 -14.61088 -14.32350 -14.09449 -13.78399 -13.73473 -13.56133 -13.38892 -13.27392 -12.84415 -12.41968 -12.31355 -12.22503 -12.19480 -12.07181 -12.03087 -11.84223 -11.74429 -11.67130 -11.51828 -11.30073 -10.93807 -10.39422 -10.26039 -10.13740 -10.03800 -9.22635 -4.98530 0.28079 0.31158 0.85446 1.34776 1.46965 1.49952 1.66032 1.84439 1.89520 2.00141 2.60016 2.66108 3.16802 3.48977 3.57115 3.60932 3.65930 3.75954 3.84308 3.85924 3.96342 3.97909 4.06097 4.09413 4.15212 4.21233 4.31544 4.32176 4.32968 4.40339 4.43092 4.43737 4.49858 4.50752 4.65475 4.68179 4.79812 4.97707 5.00778 5.01047 5.04605 5.08803 5.16107 5.16596 5.25879 5.26362 5.29457 5.46171 5.50515 5.70165 6.22647 6.27942 6.50075 6.80444 7.15887 7.70102 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.559 6.559 2 C -0.074 4.074 3 Si 0.782 3.218 4 C -0.162 4.162 5 C -0.062 4.062 6 C -0.167 4.167 7 C 0.121 3.879 8 O -0.320 6.320 9 C 0.034 3.966 10 C 0.514 3.486 11 O -0.571 6.571 12 N -0.706 5.706 13 C 0.146 3.854 14 H 0.070 0.930 15 C -0.115 4.115 16 C -0.103 4.103 17 C 0.004 3.996 18 H 0.111 0.889 19 C 0.191 3.809 20 N -0.342 5.342 21 N -0.354 5.354 22 C 0.168 3.832 23 N -0.570 5.570 24 C -0.108 4.108 25 C -0.122 4.122 26 C -0.199 4.199 27 C -0.074 4.074 28 H 0.395 0.605 29 H 0.101 0.899 30 H -0.282 1.282 31 H -0.304 1.304 32 H 0.131 0.869 33 H 0.125 0.875 34 H 0.128 0.872 35 H 0.125 0.875 36 H 0.422 0.578 37 H 0.094 0.906 38 H 0.084 0.916 39 H 0.073 0.927 40 H 0.067 0.933 41 H 0.261 0.739 42 H 0.445 0.555 43 H 0.071 0.929 44 H 0.072 0.928 45 H 0.085 0.915 46 H 0.054 0.946 47 H 0.167 0.833 48 H 0.156 0.844 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.317 4.365 -0.414 4.396 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.367 6.367 2 C -0.183 4.183 3 Si 0.688 3.312 4 C -0.163 4.163 5 C -0.080 4.080 6 C -0.186 4.186 7 C 0.076 3.924 8 O -0.233 6.233 9 C -0.044 4.044 10 C 0.300 3.700 11 O -0.450 6.450 12 N -0.359 5.359 13 C 0.042 3.958 14 H 0.088 0.912 15 C -0.152 4.152 16 C -0.142 4.142 17 C -0.017 4.017 18 H 0.129 0.871 19 C -0.080 4.080 20 N -0.181 5.181 21 N -0.193 5.193 22 C -0.122 4.122 23 N -0.184 5.184 24 C -0.147 4.147 25 C -0.161 4.161 26 C -0.217 4.217 27 C -0.091 4.091 28 H 0.245 0.755 29 H 0.119 0.881 30 H -0.209 1.209 31 H -0.233 1.233 32 H 0.149 0.851 33 H 0.143 0.857 34 H 0.146 0.854 35 H 0.142 0.858 36 H 0.260 0.740 37 H 0.112 0.888 38 H 0.103 0.897 39 H 0.091 0.909 40 H 0.086 0.914 41 H 0.276 0.724 42 H 0.288 0.712 43 H 0.089 0.911 44 H 0.091 0.909 45 H 0.104 0.896 46 H 0.073 0.927 47 H 0.184 0.816 48 H 0.173 0.827 Dipole moment (debyes) X Y Z Total from point charges 1.258 4.609 -0.085 4.778 hybrid contribution -0.474 -1.847 -1.385 2.356 sum 0.784 2.762 -1.470 3.226 Atomic orbital electron populations 1.86469 1.17519 1.82238 1.50482 1.25190 0.85131 1.11058 0.96970 0.93804 0.77729 0.74832 0.84822 1.20357 1.02793 0.94885 0.98265 1.20908 0.96836 0.94156 0.96125 1.20608 1.02459 1.01009 0.94514 1.19202 0.94684 0.91955 0.86545 1.86126 1.69239 1.38413 1.29530 1.22787 0.99443 0.93760 0.88371 1.20510 0.77834 0.87924 0.83750 1.90760 1.55677 1.18765 1.79769 1.45741 1.55827 1.14566 1.19801 1.21016 0.94450 0.94939 0.85391 0.91221 1.21732 0.96313 1.00256 0.96943 1.21486 0.96982 1.01112 0.94635 1.19831 0.95969 0.97517 0.88396 0.87118 1.25246 1.01255 0.83231 0.98297 1.74181 1.18162 1.23838 1.01949 1.74190 1.21865 0.96501 1.26735 1.27284 0.98341 1.02800 0.83777 1.44107 1.48648 1.08287 1.17371 1.21535 0.96393 0.99549 0.97244 1.21828 0.97881 1.01330 0.95064 1.21519 1.06181 0.92707 1.01329 1.21066 0.95471 1.00153 0.92444 0.75521 0.88117 1.20894 1.23275 0.85113 0.85663 0.85421 0.85778 0.74011 0.88758 0.89709 0.90853 0.91442 0.72378 0.71197 0.91078 0.90925 0.89631 0.92720 0.81570 0.82737 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.07 12.83 -148.98 -1.91 -1.98 16 2 C -0.07 0.08 2.80 71.24 0.20 0.28 16 3 Si 0.78 -3.04 29.80 68.60 2.04 -1.00 16 4 C -0.16 0.11 5.35 -19.85 -0.11 0.00 16 5 C -0.06 -0.14 9.68 22.26 0.22 0.08 16 6 C -0.17 -0.64 9.99 22.37 0.22 -0.42 16 7 C 0.12 0.22 6.69 22.51 0.15 0.37 16 8 O -0.32 -1.22 9.67 -73.35 -0.71 -1.93 16 9 C 0.03 -0.20 5.22 71.24 0.37 0.17 16 10 C 0.51 -0.42 7.87 87.66 0.69 0.27 16 11 O -0.57 -6.16 16.16 16.02 0.26 -5.90 16 12 N -0.71 5.90 5.08 -442.53 -2.25 3.66 16 13 C 0.15 -0.99 2.46 44.99 0.11 -0.88 16 14 H 0.07 -0.11 7.58 -2.39 -0.02 -0.13 16 15 C -0.11 1.19 5.39 30.59 0.16 1.36 16 16 C -0.10 0.74 5.19 30.59 0.16 0.90 16 17 C 0.00 -0.02 2.66 -11.54 -0.03 -0.05 16 18 H 0.11 -0.56 8.14 -2.39 -0.02 -0.58 16 19 C 0.19 0.19 6.99 137.98 0.96 1.15 16 20 N -0.34 -3.44 12.21 -50.15 -0.61 -4.06 16 21 N -0.35 -3.52 12.21 -59.99 -0.73 -4.25 16 22 C 0.17 -0.13 13.19 180.11 2.37 2.24 16 23 N -0.57 2.35 5.96 -189.86 -1.13 1.22 16 24 C -0.11 0.75 4.97 30.59 0.15 0.90 16 25 C -0.12 0.76 5.49 30.59 0.17 0.93 16 26 C -0.20 0.87 9.04 22.37 0.20 1.07 16 27 C -0.07 0.32 8.66 22.25 0.19 0.51 16 28 H 0.39 -3.23 8.70 -74.06 -0.64 -3.87 16 29 H 0.10 0.07 7.96 -2.39 -0.02 0.05 16 30 H -0.28 -0.05 7.11 99.48 0.71 0.66 16 31 H -0.30 -1.34 7.11 99.48 0.71 -0.64 16 32 H 0.13 0.21 8.06 -2.91 -0.02 0.18 16 33 H 0.13 0.56 8.06 -2.91 -0.02 0.54 16 34 H 0.13 -1.62 7.65 -2.38 -0.02 -1.64 16 35 H 0.12 -1.51 7.67 -2.38 -0.02 -1.53 16 36 H 0.42 -6.70 8.60 -92.71 -0.80 -7.50 16 37 H 0.09 -1.25 8.14 -2.39 -0.02 -1.27 16 38 H 0.08 -0.93 8.14 -2.39 -0.02 -0.95 16 39 H 0.07 -0.36 8.14 -2.39 -0.02 -0.38 16 40 H 0.07 -0.47 8.14 -2.39 -0.02 -0.49 16 41 H 0.26 -2.73 8.06 -2.91 -0.02 -2.76 16 42 H 0.44 -4.97 8.28 -92.71 -0.77 -5.74 16 43 H 0.07 -0.57 7.51 -2.39 -0.02 -0.58 16 44 H 0.07 -0.42 8.14 -2.39 -0.02 -0.44 16 45 H 0.09 -0.73 8.14 -2.39 -0.02 -0.75 16 46 H 0.05 -0.06 8.14 -2.39 -0.02 -0.08 16 47 H 0.17 -2.01 6.30 -2.92 -0.02 -2.02 16 48 H 0.16 -1.53 4.90 -2.91 -0.01 -1.54 16 Total: 0.00 -36.79 394.22 0.02 -36.78 By element: Atomic # 1 Polarization: -30.29 SS G_CDS: -1.15 Total: -31.43 kcal Atomic # 6 Polarization: 2.69 SS G_CDS: 6.20 Total: 8.89 kcal Atomic # 7 Polarization: 1.30 SS G_CDS: -4.72 Total: -3.43 kcal Atomic # 8 Polarization: -7.45 SS G_CDS: -2.36 Total: -9.81 kcal Atomic # 14 Polarization: -3.04 SS G_CDS: 2.04 Total: -1.00 kcal Total: -36.79 0.02 -36.78 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16624780_2989410.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 30.360 kcal (2) G-P(sol) polarization free energy of solvation -36.793 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -6.433 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.016 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.777 kcal (6) G-S(sol) free energy of system = (1) + (5) -6.417 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.21 seconds