Wall clock time and date at job start Sun Mar 7 2021 05:35:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86299 * 109.47200 * 2 1 4 4 C 1.50700 * 109.47153 * 120.00242 * 2 1 3 5 5 C 1.38265 * 119.94782 * 64.99602 * 4 2 1 6 6 C 1.38148 * 120.05824 * 179.97438 * 5 4 2 7 7 C 1.38727 * 119.94220 * 0.02562 * 6 5 4 8 8 O 1.35901 * 120.05616 * 179.97438 * 7 6 5 9 9 C 1.42898 * 117.00306 * 180.02562 * 8 7 6 10 10 C 1.53002 * 109.47281 * 180.02562 * 9 8 7 11 11 C 1.50701 * 109.47061 * 179.97438 * 10 9 8 12 12 O 1.21283 * 120.00052 * 359.97438 * 11 10 9 13 13 N 1.34770 * 119.99922 * 179.97438 * 11 10 9 14 14 C 1.46500 * 120.00256 * 180.02562 * 13 11 10 15 15 H 1.08998 * 109.46845 * 325.00694 * 14 13 11 16 16 C 1.53006 * 109.47249 * 84.99846 * 14 13 11 17 17 C 1.52997 * 109.47164 * 180.02562 * 16 14 13 18 18 C 1.53002 * 109.46978 * 299.99874 * 17 16 14 19 19 H 1.08992 * 109.47056 * 300.00064 * 18 17 16 20 20 C 1.50701 * 109.46958 * 180.02562 * 18 17 16 21 21 N 1.30521 * 126.34592 * 144.69130 * 20 18 17 22 22 N 1.28593 * 109.67203 * 179.82774 * 21 20 18 23 23 C 1.30523 * 109.67317 * 0.44319 * 22 21 20 24 24 N 1.35490 * 107.30631 * 359.73292 * 23 22 21 25 25 C 1.52996 * 109.46891 * 60.00410 * 18 17 16 26 26 C 1.52997 * 109.47473 * 205.00145 * 14 13 11 27 27 C 1.38741 * 119.89110 * 0.27215 * 7 6 5 28 28 C 1.38149 * 119.93895 * 359.47295 * 27 7 6 29 29 H 0.96699 * 113.99709 * 60.00029 * 1 2 3 30 30 H 1.09004 * 109.47443 * 240.00011 * 2 1 3 31 31 H 1.48499 * 109.99817 * 298.68169 * 3 2 1 32 32 H 1.48498 * 109.99990 * 59.99927 * 3 2 1 33 33 H 1.08002 * 119.96851 * 359.97438 * 5 4 2 34 34 H 1.07994 * 120.02723 * 179.97438 * 6 5 4 35 35 H 1.08997 * 109.47035 * 59.99507 * 9 8 7 36 36 H 1.09005 * 109.46693 * 300.00182 * 9 8 7 37 37 H 1.08991 * 109.46961 * 59.99758 * 10 9 8 38 38 H 1.09000 * 109.46564 * 299.99573 * 10 9 8 39 39 H 0.97005 * 120.00370 * 0.02562 * 13 11 10 40 40 H 1.09001 * 109.47002 * 60.00085 * 16 14 13 41 41 H 1.09000 * 109.47050 * 300.00351 * 16 14 13 42 42 H 1.09002 * 109.47045 * 180.02562 * 17 16 14 43 43 H 1.09001 * 109.47375 * 59.99966 * 17 16 14 44 44 H 1.07997 * 126.34438 * 179.73054 * 23 22 21 45 45 H 0.96997 * 126.97787 * 179.97438 * 24 23 22 46 46 H 1.09004 * 109.47368 * 179.97438 * 25 18 17 47 47 H 1.09001 * 109.47372 * 59.99964 * 25 18 17 48 48 H 1.09002 * 109.47153 * 59.99757 * 26 14 13 49 49 H 1.09001 * 109.46832 * 299.99948 * 26 14 13 50 50 H 1.07996 * 120.02886 * 179.72514 * 27 7 6 51 51 H 1.08002 * 119.96677 * 180.23504 * 28 27 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7105 1.2304 5 6 1.6840 -2.0605 1.3972 6 6 2.1439 -2.7142 2.5241 7 6 2.8540 -2.0147 3.4889 8 8 3.3071 -2.6553 4.5986 9 6 4.0302 -1.8721 5.5501 10 6 4.4566 -2.7587 6.7219 11 6 5.2198 -1.9328 7.7251 12 8 5.4049 -0.7514 7.5226 13 7 5.6966 -2.5069 8.8473 14 6 6.4380 -1.7039 9.8229 15 1 7.0276 -0.9507 9.3003 16 6 5.4534 -1.0143 10.7695 17 6 6.2277 -0.1752 11.7879 18 6 7.1593 -1.0830 12.5937 19 1 6.5699 -1.8361 13.1165 20 6 7.9215 -0.2565 13.5973 21 7 8.2726 -0.6281 14.7982 22 7 8.9129 0.3254 15.3765 23 6 8.9911 1.3520 14.5743 24 7 8.3642 1.0120 13.4223 25 6 8.1438 -1.7724 11.6471 26 6 7.3692 -2.6120 10.6285 27 6 3.0956 -0.6587 3.3222 28 6 2.6381 -0.0108 2.1911 29 1 -0.3933 0.4417 -0.7651 30 1 1.7924 -0.5138 -0.8900 31 1 1.5879 2.4585 -1.2242 32 1 1.5615 2.4679 1.2085 33 1 1.1308 -2.6045 0.6460 34 1 1.9501 -3.7686 2.6540 35 1 3.3938 -1.0665 5.9163 36 1 4.9149 -1.4485 5.0747 37 1 5.0931 -3.5639 6.3553 38 1 3.5721 -3.1825 7.1974 39 1 5.5489 -3.4519 9.0091 40 1 4.8637 -1.7676 11.2920 41 1 4.7900 -0.3674 10.1955 42 1 5.5263 0.3156 12.4626 43 1 6.8172 0.5780 11.2651 44 1 9.4673 2.2972 14.7890 45 1 8.2544 1.5647 12.6327 46 1 8.8078 -2.4188 12.2211 47 1 8.7333 -1.0192 11.1243 48 1 8.0707 -3.1032 9.9541 49 1 6.7795 -3.3652 11.1511 50 1 3.6443 -0.1111 4.0741 51 1 2.8292 1.0439 2.0590 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16624780_4549602.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:35:53 Heat of formation + Delta-G solvation = -12.876314 kcal Electronic energy + Delta-G solvation = -32247.714941 eV Core-core repulsion = 27728.712948 eV Total energy + Delta-G solvation = -4519.001993 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 373.183 amu Computer time = 1.53 seconds Orbital eigenvalues (eV) -44.15448 -41.43255 -41.00137 -39.45557 -38.98884 -37.37385 -35.73749 -34.58629 -33.51888 -32.40528 -31.97499 -31.87419 -31.47913 -29.56118 -26.62269 -25.68527 -24.57044 -24.05211 -23.50409 -23.13881 -22.17658 -21.97069 -21.41839 -20.80683 -19.49186 -19.30547 -18.55065 -17.86047 -17.59780 -17.44905 -17.01054 -16.85640 -16.77165 -16.38267 -16.17265 -15.84672 -15.67253 -15.54189 -15.20276 -15.00532 -14.74462 -14.65616 -14.43233 -14.17203 -14.00969 -13.96806 -13.69556 -13.63542 -13.28604 -12.92682 -12.87210 -12.75782 -12.43343 -12.41003 -12.27042 -12.19892 -12.01102 -11.84468 -11.73246 -11.68485 -11.66421 -11.51422 -11.30617 -10.96116 -10.48039 -10.26062 -10.08454 -10.03859 -9.21239 -4.94836 0.27202 0.30694 0.85153 1.29495 1.56133 1.57088 1.72404 1.84214 1.89236 1.92329 2.49750 2.61411 3.16992 3.42201 3.52438 3.60413 3.65917 3.78658 3.82256 3.86612 3.91242 3.92442 3.97752 4.05023 4.13832 4.21373 4.25811 4.31980 4.33134 4.33981 4.40131 4.41693 4.43343 4.48058 4.51565 4.65436 4.69085 4.71272 4.79606 4.80228 4.96772 5.00426 5.01487 5.04259 5.08688 5.16294 5.18190 5.26205 5.27687 5.31575 5.50196 5.50766 5.71078 6.22940 6.32340 6.50861 6.60036 7.19858 7.69899 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.559 6.559 2 C -0.078 4.078 3 Si 0.756 3.244 4 C -0.124 4.124 5 C -0.060 4.060 6 C -0.158 4.158 7 C 0.124 3.876 8 O -0.320 6.320 9 C 0.072 3.928 10 C -0.134 4.134 11 C 0.521 3.479 12 O -0.581 6.581 13 N -0.712 5.712 14 C 0.145 3.855 15 H 0.074 0.926 16 C -0.122 4.122 17 C -0.108 4.108 18 C 0.003 3.997 19 H 0.108 0.892 20 C 0.191 3.809 21 N -0.343 5.343 22 N -0.355 5.355 23 C 0.169 3.831 24 N -0.569 5.569 25 C -0.102 4.102 26 C -0.116 4.116 27 C -0.209 4.209 28 C -0.084 4.084 29 H 0.394 0.606 30 H 0.097 0.903 31 H -0.284 1.284 32 H -0.302 1.302 33 H 0.142 0.858 34 H 0.145 0.855 35 H 0.062 0.938 36 H 0.068 0.932 37 H 0.127 0.873 38 H 0.124 0.876 39 H 0.419 0.581 40 H 0.080 0.920 41 H 0.056 0.944 42 H 0.071 0.929 43 H 0.073 0.927 44 H 0.261 0.739 45 H 0.445 0.555 46 H 0.071 0.929 47 H 0.069 0.931 48 H 0.084 0.916 49 H 0.089 0.911 50 H 0.141 0.859 51 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.136 -0.943 -4.811 5.348 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.369 6.369 2 C -0.187 4.187 3 Si 0.662 3.338 4 C -0.125 4.125 5 C -0.078 4.078 6 C -0.177 4.177 7 C 0.078 3.922 8 O -0.234 6.234 9 C -0.004 4.004 10 C -0.174 4.174 11 C 0.308 3.692 12 O -0.461 6.461 13 N -0.364 5.364 14 C 0.041 3.959 15 H 0.092 0.908 16 C -0.161 4.161 17 C -0.146 4.146 18 C -0.018 4.018 19 H 0.126 0.874 20 C -0.080 4.080 21 N -0.182 5.182 22 N -0.193 5.193 23 C -0.122 4.122 24 N -0.183 5.183 25 C -0.141 4.141 26 C -0.154 4.154 27 C -0.228 4.228 28 C -0.101 4.101 29 H 0.244 0.756 30 H 0.115 0.885 31 H -0.211 1.211 32 H -0.230 1.230 33 H 0.160 0.840 34 H 0.162 0.838 35 H 0.081 0.919 36 H 0.087 0.913 37 H 0.145 0.855 38 H 0.142 0.858 39 H 0.256 0.744 40 H 0.098 0.902 41 H 0.075 0.925 42 H 0.090 0.910 43 H 0.092 0.908 44 H 0.277 0.723 45 H 0.288 0.712 46 H 0.090 0.910 47 H 0.088 0.912 48 H 0.102 0.898 49 H 0.107 0.893 50 H 0.159 0.841 51 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges 2.351 -0.746 -2.944 3.841 hybrid contribution -1.343 1.086 -1.537 2.312 sum 1.008 0.339 -4.481 4.605 Atomic orbital electron populations 1.86552 1.18677 1.80598 1.51057 1.24886 0.83887 1.11355 0.98541 0.94224 0.90561 0.72747 0.76270 1.19399 1.01610 0.94629 0.96839 1.21009 0.96396 0.93709 0.96697 1.20680 1.01715 1.01481 0.93787 1.19160 0.94618 0.91247 0.87158 1.85957 1.69302 1.38785 1.29377 1.22476 0.95816 0.93639 0.88443 1.21448 1.03028 0.99229 0.93649 1.20570 0.78613 0.87526 0.82455 1.90734 1.59593 1.17928 1.77846 1.45927 1.56085 1.14304 1.20095 1.21000 0.92450 0.93766 0.88707 0.90806 1.21827 0.98050 0.99613 0.96614 1.21535 0.98096 0.97736 0.97271 1.19824 0.94813 0.95617 0.91528 0.87436 1.25226 1.00985 0.85583 0.96206 1.74186 1.14933 1.23473 1.05636 1.74192 1.17849 0.99362 1.27940 1.27292 0.99162 1.02672 0.83025 1.44091 1.43152 1.13768 1.17331 1.21485 0.97094 0.99469 0.96079 1.21741 0.98375 0.97855 0.97417 1.21388 1.06632 0.93979 1.00767 1.20978 0.96605 0.99828 0.92698 0.75551 0.88520 1.21106 1.23044 0.83991 0.83751 0.91928 0.91340 0.85460 0.85751 0.74403 0.90178 0.92471 0.91041 0.90798 0.72316 0.71152 0.91023 0.91198 0.89779 0.89270 0.84101 0.84370 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -1.64 12.81 -148.98 -1.91 -3.54 16 2 C -0.08 -0.02 2.79 71.24 0.20 0.18 16 3 Si 0.76 -0.60 29.85 68.60 2.05 1.45 16 4 C -0.12 -0.45 5.38 -19.85 -0.11 -0.56 16 5 C -0.06 -0.20 9.68 22.25 0.22 0.02 16 6 C -0.16 -0.56 9.99 22.37 0.22 -0.34 16 7 C 0.12 0.57 6.69 22.51 0.15 0.72 16 8 O -0.32 -0.94 10.14 -92.43 -0.94 -1.88 16 9 C 0.07 -0.02 4.03 71.98 0.29 0.27 16 10 C -0.13 0.81 6.07 29.85 0.18 0.99 16 11 C 0.52 -1.16 7.79 87.66 0.68 -0.47 16 12 O -0.58 -3.72 15.64 -3.04 -0.05 -3.77 16 13 N -0.71 5.41 5.08 -442.53 -2.25 3.16 16 14 C 0.15 -0.95 2.45 44.99 0.11 -0.84 16 15 H 0.07 -0.18 7.58 -2.39 -0.02 -0.20 16 16 C -0.12 0.72 5.49 30.60 0.17 0.89 16 17 C -0.11 0.73 4.97 30.59 0.15 0.88 16 18 C 0.00 -0.01 2.66 -11.54 -0.03 -0.05 16 19 H 0.11 -0.43 8.14 -2.39 -0.02 -0.45 16 20 C 0.19 0.24 6.99 137.98 0.96 1.20 16 21 N -0.34 -3.58 12.21 -50.15 -0.61 -4.19 16 22 N -0.35 -3.59 12.21 -59.99 -0.73 -4.32 16 23 C 0.17 -0.14 13.19 180.11 2.37 2.24 16 24 N -0.57 2.39 5.96 -189.86 -1.13 1.26 16 25 C -0.10 0.68 5.19 30.61 0.16 0.84 16 26 C -0.12 1.10 5.39 30.61 0.17 1.27 16 27 C -0.21 -0.81 9.04 22.37 0.20 -0.61 16 28 C -0.08 -0.28 8.66 22.26 0.19 -0.09 16 29 H 0.39 -2.06 8.74 -74.06 -0.65 -2.71 16 30 H 0.10 -0.40 7.96 -2.39 -0.02 -0.42 16 31 H -0.28 -0.81 7.11 99.48 0.71 -0.11 16 32 H -0.30 -2.08 7.04 99.48 0.70 -1.37 16 33 H 0.14 0.05 8.06 -2.91 -0.02 0.03 16 34 H 0.14 0.07 8.06 -2.91 -0.02 0.04 16 35 H 0.06 0.10 7.61 -2.39 -0.02 0.08 16 36 H 0.07 0.04 7.63 -2.38 -0.02 0.02 16 37 H 0.13 -1.24 8.14 -2.39 -0.02 -1.26 16 38 H 0.12 -1.15 8.14 -2.39 -0.02 -1.16 16 39 H 0.42 -5.61 8.60 -92.70 -0.80 -6.40 16 40 H 0.08 -0.58 8.14 -2.39 -0.02 -0.60 16 41 H 0.06 -0.09 8.14 -2.39 -0.02 -0.10 16 42 H 0.07 -0.40 8.14 -2.39 -0.02 -0.42 16 43 H 0.07 -0.62 7.52 -2.39 -0.02 -0.64 16 44 H 0.26 -2.77 8.06 -2.91 -0.02 -2.80 16 45 H 0.45 -5.11 8.29 -92.71 -0.77 -5.88 16 46 H 0.07 -0.30 8.14 -2.39 -0.02 -0.32 16 47 H 0.07 -0.49 8.14 -2.39 -0.02 -0.51 16 48 H 0.08 -0.84 8.14 -2.39 -0.02 -0.86 16 49 H 0.09 -1.02 8.14 -2.39 -0.02 -1.04 16 50 H 0.14 0.23 6.30 -2.91 -0.02 0.21 16 51 H 0.14 0.04 4.86 -2.91 -0.01 0.03 16 Total: 0.00 -31.66 415.19 -0.47 -32.13 By element: Atomic # 1 Polarization: -25.64 SS G_CDS: -1.19 Total: -26.84 kcal Atomic # 6 Polarization: 0.26 SS G_CDS: 6.29 Total: 6.55 kcal Atomic # 7 Polarization: 0.62 SS G_CDS: -4.72 Total: -4.10 kcal Atomic # 8 Polarization: -6.29 SS G_CDS: -2.89 Total: -9.19 kcal Atomic # 14 Polarization: -0.60 SS G_CDS: 2.05 Total: 1.45 kcal Total: -31.66 -0.47 -32.13 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16624780_4549602.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 19.249 kcal (2) G-P(sol) polarization free energy of solvation -31.656 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -12.407 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.469 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.125 kcal (6) G-S(sol) free energy of system = (1) + (5) -12.876 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.53 seconds