Wall clock time and date at job start Sun Mar 7 2021 05:35:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86299 * 109.47417 * 2 1 4 4 C 1.50709 * 109.46849 * 119.99811 * 2 1 3 5 5 C 1.38250 * 119.97111 * 245.00009 * 4 2 1 6 6 C 1.38285 * 120.10770 * 179.97438 * 5 4 2 7 7 C 1.38120 * 120.05789 * 0.04068 * 6 5 4 8 8 C 1.38747 * 119.94422 * 359.97438 * 7 6 5 9 9 O 1.35907 * 120.05423 * 180.02562 * 8 7 6 10 10 C 1.42896 * 116.99955 * 359.97438 * 9 8 7 11 11 C 1.53000 * 109.47083 * 180.02562 * 10 9 8 12 12 C 1.50702 * 109.46917 * 180.02562 * 11 10 9 13 13 O 1.21279 * 120.00201 * 359.97438 * 12 11 10 14 14 N 1.34779 * 119.99614 * 180.02562 * 12 11 10 15 15 C 1.46500 * 119.99793 * 179.97438 * 14 12 11 16 16 H 1.09002 * 109.47092 * 34.99824 * 15 14 12 17 17 C 1.52997 * 109.47007 * 154.99772 * 15 14 12 18 18 C 1.52999 * 109.47317 * 179.97438 * 17 15 14 19 19 C 1.53005 * 109.47159 * 300.00546 * 18 17 15 20 20 H 1.09002 * 109.46935 * 299.99411 * 19 18 17 21 21 C 1.50699 * 109.47155 * 179.97438 * 19 18 17 22 22 N 1.30520 * 126.34712 * 94.68268 * 21 19 18 23 23 N 1.28601 * 109.67284 * 179.82673 * 22 21 19 24 24 C 1.30518 * 109.67044 * 0.44904 * 23 22 21 25 25 N 1.35491 * 107.30825 * 359.73059 * 24 23 22 26 26 C 1.52997 * 109.47452 * 59.99536 * 19 18 17 27 27 C 1.53000 * 109.47023 * 274.99565 * 15 14 12 28 28 C 1.38168 * 119.97188 * 65.29647 * 4 2 1 29 29 H 0.96703 * 114.00199 * 300.00512 * 1 2 3 30 30 H 1.08997 * 109.47388 * 239.99482 * 2 1 3 31 31 H 1.48503 * 109.99821 * 299.99928 * 3 2 1 32 32 H 1.48497 * 110.00151 * 61.31428 * 3 2 1 33 33 H 1.07998 * 119.93974 * 359.97438 * 5 4 2 34 34 H 1.07999 * 119.96672 * 180.02562 * 6 5 4 35 35 H 1.08005 * 120.02487 * 179.97438 * 7 6 5 36 36 H 1.09002 * 109.47042 * 60.00274 * 10 9 8 37 37 H 1.09002 * 109.47196 * 300.00645 * 10 9 8 38 38 H 1.09002 * 109.47125 * 60.00120 * 11 10 9 39 39 H 1.09002 * 109.47133 * 299.99844 * 11 10 9 40 40 H 0.97004 * 119.99983 * 359.97438 * 14 12 11 41 41 H 1.08996 * 109.47853 * 300.00060 * 17 15 14 42 42 H 1.09002 * 109.47153 * 60.00089 * 17 15 14 43 43 H 1.09002 * 109.46716 * 60.00091 * 18 17 15 44 44 H 1.09000 * 109.47486 * 180.02562 * 18 17 15 45 45 H 1.08000 * 126.34434 * 179.73267 * 24 23 22 46 46 H 0.97005 * 126.97809 * 179.97438 * 25 24 23 47 47 H 1.09002 * 109.46695 * 59.99734 * 26 19 18 48 48 H 1.08993 * 109.47194 * 179.97438 * 26 19 18 49 49 H 1.08992 * 109.47399 * 300.00063 * 27 15 14 50 50 H 1.09004 * 109.46724 * 60.00549 * 27 15 14 51 51 H 1.07997 * 120.02691 * 0.02562 * 28 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 1.2306 5 6 2.6387 -0.0116 2.1911 6 6 3.1004 -0.6605 3.3216 7 6 2.8566 -2.0091 3.4933 8 6 2.1471 -2.7127 2.5306 9 8 1.9054 -4.0397 2.6976 10 6 2.4117 -4.6465 3.8881 11 6 2.0446 -6.1318 3.8993 12 6 2.5779 -6.7716 5.1552 13 8 3.1916 -6.1054 5.9616 14 7 2.3738 -8.0845 5.3816 15 6 2.8927 -8.7066 6.6022 16 1 2.8370 -7.9941 7.4252 17 6 2.0563 -9.9424 6.9400 18 6 2.5986 -10.5925 8.2144 19 6 4.0551 -11.0067 7.9956 20 1 4.1105 -11.7191 7.1725 21 6 4.5895 -11.6465 9.2510 22 7 4.6215 -12.9244 9.5147 23 7 5.1467 -13.1144 10.6731 24 6 5.4647 -11.9658 11.2050 25 7 5.1202 -11.0015 10.3178 26 6 4.8916 -9.7710 7.6577 27 6 4.3493 -9.1209 6.3839 28 6 1.6898 -2.0609 1.3949 29 1 -0.3934 0.4418 0.7650 30 1 1.7924 -0.5139 -0.8899 31 1 1.5616 2.4678 -1.2085 32 1 1.5880 2.4586 1.2241 33 1 2.8309 1.0428 2.0582 34 1 3.6524 -0.1123 4.0707 35 1 3.2178 -2.5155 4.3763 36 1 1.9752 -4.1575 4.7591 37 1 3.4961 -4.5403 3.9173 38 1 2.4813 -6.6206 3.0284 39 1 0.9602 -6.2383 3.8700 40 1 1.8832 -8.6174 4.7363 41 1 1.0185 -9.6474 7.0955 42 1 2.1120 -10.6549 6.1171 43 1 2.5432 -9.8801 9.0376 44 1 2.0029 -11.4731 8.4549 45 1 5.9185 -11.8125 12.1730 46 1 5.2307 -10.0437 10.4248 47 1 4.8361 -9.0586 8.4809 48 1 5.9292 -10.0660 7.5023 49 1 4.4050 -9.8334 5.5610 50 1 4.9452 -8.2404 6.1432 51 1 1.1416 -2.6074 0.6418 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16624780_4549614.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:35:59 Heat of formation + Delta-G solvation = -12.572627 kcal Electronic energy + Delta-G solvation = -32280.933912 eV Core-core repulsion = 27761.945088 eV Total energy + Delta-G solvation = -4518.988824 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 373.183 amu Computer time = 1.32 seconds Orbital eigenvalues (eV) -44.14581 -41.50312 -41.09080 -39.59912 -39.04635 -37.34838 -35.85267 -34.60960 -33.55391 -32.48354 -32.31453 -32.13021 -30.85521 -29.59337 -27.05143 -25.75804 -24.52466 -24.15054 -23.67804 -23.33551 -22.28342 -21.96564 -21.56461 -20.99705 -19.41539 -19.35880 -18.26155 -17.78508 -17.60743 -17.53061 -17.13522 -16.85259 -16.80171 -16.42987 -16.34757 -16.13709 -15.91894 -15.51412 -15.42419 -15.17583 -14.91135 -14.82095 -14.48052 -14.24770 -14.14163 -14.07648 -13.76450 -13.51514 -13.25743 -12.99694 -12.88972 -12.86548 -12.56431 -12.48191 -12.41412 -12.35963 -11.91637 -11.89869 -11.85419 -11.83667 -11.64876 -11.54784 -11.34129 -11.03769 -10.63308 -10.27392 -10.20014 -9.93111 -9.24222 -4.95571 0.22131 0.41862 0.79161 1.26210 1.43095 1.59590 1.61135 1.74948 1.90522 1.95706 2.37811 2.67822 3.04436 3.30502 3.37651 3.41392 3.45839 3.62547 3.63749 3.75195 3.75917 3.80040 3.86938 3.90492 3.97255 4.04884 4.08637 4.12333 4.15619 4.21181 4.24912 4.30943 4.31651 4.42569 4.45539 4.52191 4.53208 4.56688 4.57972 4.70224 4.76020 4.78847 4.83711 4.85457 4.98004 5.01274 5.07255 5.09951 5.27159 5.28241 5.38685 5.45213 5.68996 6.01302 6.24707 6.37003 6.39534 6.99897 7.73896 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.528 6.528 2 C -0.076 4.076 3 Si 0.690 3.310 4 C -0.080 4.080 5 C -0.156 4.156 6 C -0.073 4.073 7 C -0.202 4.202 8 C 0.132 3.868 9 O -0.316 6.316 10 C 0.075 3.925 11 C -0.143 4.143 12 C 0.522 3.478 13 O -0.538 6.538 14 N -0.725 5.725 15 C 0.143 3.857 16 H 0.090 0.910 17 C -0.126 4.126 18 C -0.107 4.107 19 C -0.003 4.003 20 H 0.110 0.890 21 C 0.185 3.815 22 N -0.290 5.290 23 N -0.296 5.296 24 C 0.154 3.846 25 N -0.581 5.581 26 C -0.115 4.115 27 C -0.128 4.128 28 C -0.125 4.125 29 H 0.376 0.624 30 H 0.120 0.880 31 H -0.257 1.257 32 H -0.260 1.260 33 H 0.129 0.871 34 H 0.130 0.870 35 H 0.132 0.868 36 H 0.072 0.928 37 H 0.073 0.927 38 H 0.108 0.892 39 H 0.107 0.893 40 H 0.404 0.596 41 H 0.077 0.923 42 H 0.076 0.924 43 H 0.067 0.933 44 H 0.080 0.920 45 H 0.223 0.777 46 H 0.429 0.571 47 H 0.064 0.936 48 H 0.075 0.925 49 H 0.072 0.928 50 H 0.075 0.925 51 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.374 2.579 0.292 2.936 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.335 6.335 2 C -0.186 4.186 3 Si 0.592 3.408 4 C -0.081 4.081 5 C -0.174 4.174 6 C -0.091 4.091 7 C -0.221 4.221 8 C 0.087 3.913 9 O -0.230 6.230 10 C -0.001 4.001 11 C -0.183 4.183 12 C 0.309 3.691 13 O -0.415 6.415 14 N -0.377 5.377 15 C 0.039 3.961 16 H 0.108 0.892 17 C -0.164 4.164 18 C -0.146 4.146 19 C -0.024 4.024 20 H 0.128 0.872 21 C -0.084 4.084 22 N -0.131 5.131 23 N -0.135 5.135 24 C -0.135 4.135 25 N -0.194 5.194 26 C -0.153 4.153 27 C -0.166 4.166 28 C -0.144 4.144 29 H 0.224 0.776 30 H 0.138 0.862 31 H -0.182 1.182 32 H -0.185 1.185 33 H 0.146 0.854 34 H 0.148 0.852 35 H 0.150 0.850 36 H 0.090 0.910 37 H 0.091 0.909 38 H 0.126 0.874 39 H 0.126 0.874 40 H 0.239 0.761 41 H 0.096 0.904 42 H 0.095 0.905 43 H 0.085 0.915 44 H 0.099 0.901 45 H 0.239 0.761 46 H 0.269 0.731 47 H 0.083 0.917 48 H 0.093 0.907 49 H 0.091 0.909 50 H 0.093 0.907 51 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges 1.404 1.758 0.047 2.250 hybrid contribution -0.829 1.362 0.922 1.841 sum 0.574 3.119 0.968 3.316 Atomic orbital electron populations 1.86612 1.17549 1.80005 1.49291 1.25077 0.84075 1.11129 0.98291 0.94844 0.91693 0.74207 0.80096 1.20065 0.97978 0.93587 0.96425 1.20981 1.01366 0.99958 0.95089 1.20925 0.97589 0.93658 0.96971 1.21390 1.04128 0.95960 1.00574 1.18954 0.95205 0.82650 0.94497 1.85979 1.74434 1.20308 1.42291 1.22408 0.99668 0.91810 0.86192 1.21482 1.04326 0.95084 0.97360 1.20300 0.79364 0.82042 0.87434 1.90746 1.40825 1.62543 1.47379 1.46023 1.58066 1.09570 1.24014 1.21053 0.92942 0.94694 0.87435 0.89168 1.21808 0.99748 0.96357 0.98477 1.21532 0.94021 1.01337 0.97695 1.19782 0.94819 0.96920 0.90883 0.87154 1.24851 1.00899 0.90168 0.92458 1.74308 1.17127 1.12607 1.09058 1.74311 1.13885 1.22191 1.03141 1.26590 1.03654 0.84535 0.98686 1.44136 1.47960 1.11931 1.15358 1.21590 0.99695 0.95647 0.98414 1.21887 0.95784 1.01276 0.97669 1.20253 1.03285 0.93691 0.97134 0.77610 0.86240 1.18219 1.18523 0.85394 0.85192 0.85009 0.90993 0.90913 0.87370 0.87436 0.76132 0.90424 0.90496 0.91472 0.90086 0.76095 0.73131 0.91697 0.90663 0.90922 0.90670 0.84844 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.78 12.84 -35.23 -0.45 -1.23 16 2 C -0.08 0.00 2.80 36.01 0.10 0.10 16 3 Si 0.69 -0.63 29.88 -169.99 -5.08 -5.71 16 4 C -0.08 -0.05 5.35 -104.64 -0.56 -0.61 16 5 C -0.16 0.00 8.67 -39.56 -0.34 -0.34 16 6 C -0.07 0.00 10.04 -39.61 -0.40 -0.40 16 7 C -0.20 -0.17 9.04 -39.44 -0.36 -0.53 16 8 C 0.13 0.24 6.69 -39.22 -0.26 -0.02 16 9 O -0.32 -0.44 10.14 -19.45 -0.20 -0.64 16 10 C 0.07 -0.03 4.03 37.16 0.15 0.12 16 11 C -0.14 0.38 6.07 -27.88 -0.17 0.21 16 12 C 0.52 -0.55 7.79 -10.98 -0.09 -0.63 16 13 O -0.54 -1.47 15.64 5.56 0.09 -1.38 16 14 N -0.73 2.46 5.08 -53.81 -0.27 2.19 16 15 C 0.14 -0.44 2.45 -67.93 -0.17 -0.61 16 16 H 0.09 -0.12 7.58 -51.93 -0.39 -0.51 16 17 C -0.13 0.54 5.39 -26.73 -0.14 0.39 16 18 C -0.11 0.34 5.19 -26.73 -0.14 0.20 16 19 C 0.00 0.01 2.66 -91.77 -0.24 -0.24 16 20 H 0.11 -0.24 8.14 -51.93 -0.42 -0.66 16 21 C 0.19 0.06 6.99 -154.99 -1.08 -1.02 16 22 N -0.29 -1.30 12.21 32.80 0.40 -0.90 16 23 N -0.30 -1.32 12.21 29.69 0.36 -0.95 16 24 C 0.15 -0.05 13.19 -89.95 -1.19 -1.24 16 25 N -0.58 1.15 5.96 -11.36 -0.07 1.09 16 26 C -0.11 0.39 4.97 -26.76 -0.13 0.26 16 27 C -0.13 0.38 5.49 -26.75 -0.15 0.24 16 28 C -0.12 -0.21 9.63 -39.43 -0.38 -0.59 16 29 H 0.38 -0.50 8.70 45.56 0.40 -0.10 16 30 H 0.12 -0.09 7.96 -51.93 -0.41 -0.51 16 31 H -0.26 -0.60 7.11 56.52 0.40 -0.20 16 32 H -0.26 -0.25 7.01 56.52 0.40 0.15 16 33 H 0.13 -0.21 4.83 -52.49 -0.25 -0.47 16 34 H 0.13 -0.26 8.06 -52.49 -0.42 -0.68 16 35 H 0.13 -0.02 6.30 -52.48 -0.33 -0.35 16 36 H 0.07 0.00 7.62 -51.93 -0.40 -0.39 16 37 H 0.07 -0.01 7.62 -51.93 -0.40 -0.41 16 38 H 0.11 -0.43 8.14 -51.93 -0.42 -0.85 16 39 H 0.11 -0.42 8.14 -51.93 -0.42 -0.84 16 40 H 0.40 -2.36 8.60 -40.82 -0.35 -2.72 16 41 H 0.08 -0.33 8.14 -51.93 -0.42 -0.75 16 42 H 0.08 -0.38 8.14 -51.93 -0.42 -0.80 16 43 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 44 H 0.08 -0.17 8.14 -51.93 -0.42 -0.60 16 45 H 0.22 -1.03 8.06 -52.49 -0.42 -1.45 16 46 H 0.43 -2.28 8.28 -40.82 -0.34 -2.62 16 47 H 0.06 -0.26 7.52 -51.93 -0.39 -0.65 16 48 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 49 H 0.07 -0.25 8.14 -51.93 -0.42 -0.67 16 50 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 51 H 0.13 0.21 8.06 -52.49 -0.42 -0.22 16 LS Contribution 415.11 15.07 6.26 6.26 Total: 0.00 -12.03 415.11 -12.07 -24.10 By element: Atomic # 1 Polarization: -10.53 SS G_CDS: -7.57 Total: -18.10 kcal Atomic # 6 Polarization: 0.83 SS G_CDS: -5.54 Total: -4.72 kcal Atomic # 7 Polarization: 1.00 SS G_CDS: 0.42 Total: 1.43 kcal Atomic # 8 Polarization: -2.69 SS G_CDS: -0.56 Total: -3.26 kcal Atomic # 14 Polarization: -0.63 SS G_CDS: -5.08 Total: -5.71 kcal Total LS contribution 6.26 Total: 6.26 kcal Total: -12.03 -12.07 -24.10 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16624780_4549614.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 11.529 kcal (2) G-P(sol) polarization free energy of solvation -12.027 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -0.499 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.074 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.101 kcal (6) G-S(sol) free energy of system = (1) + (5) -12.573 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.32 seconds