Wall clock time and date at job start Sun Mar 7 2021 05:36:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86299 * 109.47520 * 2 1 4 4 C 1.50703 * 109.46880 * 239.99610 * 2 1 3 5 5 C 1.38245 * 119.94033 * 120.00248 * 4 2 1 6 6 C 1.38172 * 120.05216 * 180.02562 * 5 4 2 7 7 C 1.38708 * 119.94643 * 0.02562 * 6 5 4 8 8 O 1.35897 * 120.05613 * 180.02562 * 7 6 5 9 9 C 1.42893 * 117.00210 * 359.95120 * 8 7 6 10 10 C 1.50697 * 109.47560 * 180.02562 * 9 8 7 11 11 O 1.21282 * 119.99621 * 359.97438 * 10 9 8 12 12 N 1.34772 * 120.00525 * 179.97438 * 10 9 8 13 13 C 1.46504 * 120.00165 * 179.97438 * 12 10 9 14 14 H 1.08997 * 109.47172 * 324.99970 * 13 12 10 15 15 C 1.52996 * 109.47028 * 85.00390 * 13 12 10 16 16 C 1.53000 * 109.47383 * 179.97438 * 15 13 12 17 17 C 1.52996 * 109.47066 * 300.00058 * 16 15 13 18 18 H 1.09009 * 109.47119 * 299.99794 * 17 16 15 19 19 C 1.50697 * 109.47423 * 179.97438 * 17 16 15 20 20 N 1.30520 * 126.34886 * 144.68900 * 19 17 16 21 21 N 1.28594 * 109.66895 * 179.82716 * 20 19 17 22 22 C 1.30513 * 109.67710 * 0.44454 * 21 20 19 23 23 N 1.35491 * 107.30983 * 359.73271 * 22 21 20 24 24 C 1.52999 * 109.47404 * 59.99329 * 17 16 15 25 25 C 1.53000 * 109.47556 * 300.00371 * 24 17 16 26 26 C 1.38761 * 119.88682 * 359.97438 * 7 6 5 27 27 N 1.47997 * 120.02681 * 180.02562 * 26 7 6 28 28 O 1.21799 * 120.00165 * 179.97438 * 27 26 7 29 29 O 1.21804 * 120.00376 * 359.97438 * 27 26 7 30 30 C 1.38119 * 119.94332 * 0.02776 * 26 7 6 31 31 H 0.96700 * 113.99359 * 59.99812 * 1 2 3 32 32 H 1.09005 * 109.47291 * 120.00312 * 2 1 3 33 33 H 1.48501 * 109.99702 * 298.67922 * 3 2 1 34 34 H 1.48497 * 110.00330 * 59.99863 * 3 2 1 35 35 H 1.08002 * 119.97517 * 359.72420 * 5 4 2 36 36 H 1.08002 * 120.02512 * 179.97438 * 6 5 4 37 37 H 1.09004 * 109.47172 * 300.00411 * 9 8 7 38 38 H 1.09003 * 109.46925 * 60.00002 * 9 8 7 39 39 H 0.97005 * 120.00183 * 0.02562 * 12 10 9 40 40 H 1.09004 * 109.47238 * 300.00177 * 15 13 12 41 41 H 1.09003 * 109.47188 * 59.99468 * 15 13 12 42 42 H 1.08998 * 109.46926 * 179.97438 * 16 15 13 43 43 H 1.08997 * 109.46912 * 59.99522 * 16 15 13 44 44 H 1.08009 * 126.34826 * 179.73294 * 22 21 20 45 45 H 0.96995 * 126.98477 * 180.02562 * 23 22 21 46 46 H 1.09004 * 109.47576 * 179.97438 * 24 17 16 47 47 H 1.09009 * 109.46603 * 60.00148 * 24 17 16 48 48 H 1.08997 * 109.46912 * 299.99958 * 25 24 17 49 49 H 1.08999 * 109.47134 * 179.97438 * 25 24 17 50 50 H 1.07998 * 119.97129 * 179.97438 * 30 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2305 5 6 2.7260 -0.0376 -2.1397 6 6 3.1874 -0.6866 -3.2689 7 6 2.8521 -2.0143 -3.4900 8 8 3.3050 -2.6549 -4.5996 9 6 4.1215 -1.8998 -5.4969 10 6 4.5259 -2.7685 -6.6600 11 8 4.1521 -3.9209 -6.7149 12 7 5.3029 -2.2648 -7.6392 13 6 5.6965 -3.1094 -8.7697 14 1 5.8456 -4.1324 -8.4243 15 6 4.5957 -3.0851 -9.8320 16 6 5.0069 -3.9668 -11.0129 17 6 6.3092 -3.4366 -11.6159 18 1 6.1598 -2.4135 -11.9610 19 6 6.7146 -4.3053 -12.7786 20 7 7.2970 -3.9061 -13.8764 21 7 7.5002 -4.9134 -14.6495 22 6 7.0484 -5.9995 -14.0841 23 7 6.5369 -5.6447 -12.8807 24 6 7.4101 -3.4608 -10.5536 25 6 6.9989 -2.5792 -9.3727 26 6 2.0542 -2.6874 -2.5758 27 7 1.6950 -4.1042 -2.8085 28 8 0.9951 -4.6947 -2.0055 29 8 2.0994 -4.6797 -3.8029 30 6 1.5956 -2.0341 -1.4487 31 1 -0.3932 0.4417 -0.7651 32 1 1.7924 -0.5139 0.8900 33 1 1.5881 2.4585 -1.2243 34 1 1.5617 2.4679 1.2084 35 1 2.9825 0.9977 -1.9697 36 1 3.8079 -0.1603 -3.9791 37 1 3.5599 -1.0406 -5.8635 38 1 5.0132 -1.5546 -4.9735 39 1 5.6023 -1.3431 -7.5952 40 1 3.6677 -3.4624 -9.4022 41 1 4.4465 -2.0621 -10.1773 42 1 4.2224 -3.9498 -11.7694 43 1 5.1563 -4.9898 -10.6678 44 1 7.0769 -6.9964 -14.4988 45 1 6.1271 -6.2305 -12.2252 46 1 8.3381 -3.0835 -10.9833 47 1 7.5595 -4.4840 -10.2085 48 1 6.8494 -1.5562 -9.7178 49 1 7.7830 -2.5968 -8.6158 50 1 0.9742 -2.5575 -0.7371 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16624780_4549638.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:36:34 Heat of formation + Delta-G solvation = 4.730730 kcal Electronic energy + Delta-G solvation = -37406.714154 eV Core-core repulsion = 32212.996843 eV Total energy + Delta-G solvation = -5193.717311 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 404.162 amu Computer time = 1.45 seconds Orbital eigenvalues (eV) -44.13448 -43.06909 -41.85299 -41.13974 -39.94257 -39.12247 -37.67227 -37.17206 -35.86565 -34.60473 -33.58448 -32.72307 -32.38161 -32.13347 -30.57462 -29.05195 -27.63958 -26.77049 -24.95677 -24.32052 -24.00389 -23.35962 -22.85389 -22.24400 -21.75655 -21.14311 -20.52333 -19.49704 -19.39128 -19.30726 -18.61282 -18.39147 -18.36665 -17.72513 -17.48976 -17.23676 -16.83245 -16.59289 -16.46178 -16.36164 -16.23364 -15.86386 -15.76805 -15.35159 -15.34101 -15.08893 -14.93722 -14.35006 -14.16489 -14.13501 -13.89194 -13.78177 -13.52031 -13.34795 -12.88719 -12.66609 -12.57998 -12.55094 -12.48398 -12.36797 -12.24549 -12.04938 -11.90730 -11.89790 -11.82237 -11.78204 -11.65996 -11.33000 -11.02433 -11.01071 -10.93532 -10.32852 -10.19329 -9.96488 -5.25378 -1.17738 -0.42905 0.33506 0.48595 0.80375 0.96193 1.01721 1.29716 1.32562 1.72624 1.76201 1.88442 1.91438 2.10339 2.92504 2.95918 3.04129 3.11728 3.17598 3.26655 3.38224 3.41101 3.48924 3.51198 3.56367 3.62328 3.65381 3.78020 3.88561 3.96254 4.07467 4.09606 4.11591 4.13483 4.15272 4.29720 4.31271 4.38767 4.40521 4.46624 4.56284 4.63126 4.74643 4.78523 4.83490 4.84300 4.87973 5.00721 5.05377 5.10552 5.20918 5.38717 5.65545 6.02821 6.12076 6.16004 6.89049 6.94072 7.74899 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.525 6.525 2 C -0.073 4.073 3 Si 0.688 3.312 4 C -0.156 4.156 5 C -0.024 4.024 6 C -0.209 4.209 7 C 0.200 3.800 8 O -0.254 6.254 9 C 0.030 3.970 10 C 0.515 3.485 11 O -0.495 6.495 12 N -0.724 5.724 13 C 0.146 3.854 14 H 0.093 0.907 15 C -0.128 4.128 16 C -0.115 4.115 17 C -0.003 4.003 18 H 0.110 0.890 19 C 0.185 3.815 20 N -0.291 5.291 21 N -0.296 5.296 22 C 0.155 3.845 23 N -0.581 5.581 24 C -0.107 4.107 25 C -0.125 4.125 26 C -0.075 4.075 27 N 0.029 4.971 28 O -0.177 6.177 29 O -0.119 6.119 30 C 0.009 3.991 31 H 0.378 0.622 32 H 0.126 0.874 33 H -0.256 1.256 34 H -0.250 1.250 35 H 0.150 0.850 36 H 0.157 0.843 37 H 0.102 0.898 38 H 0.103 0.897 39 H 0.402 0.598 40 H 0.076 0.924 41 H 0.072 0.928 42 H 0.075 0.925 43 H 0.066 0.934 44 H 0.223 0.777 45 H 0.429 0.571 46 H 0.081 0.919 47 H 0.068 0.932 48 H 0.076 0.924 49 H 0.078 0.922 50 H 0.164 0.836 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.955 7.164 2.396 8.527 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.331 6.331 2 C -0.182 4.182 3 Si 0.587 3.413 4 C -0.157 4.157 5 C -0.042 4.042 6 C -0.229 4.229 7 C 0.150 3.850 8 O -0.163 6.163 9 C -0.049 4.049 10 C 0.298 3.702 11 O -0.367 6.367 12 N -0.378 5.378 13 C 0.042 3.958 14 H 0.111 0.889 15 C -0.167 4.167 16 C -0.154 4.154 17 C -0.024 4.024 18 H 0.128 0.872 19 C -0.084 4.084 20 N -0.131 5.131 21 N -0.136 5.136 22 C -0.134 4.134 23 N -0.194 5.194 24 C -0.146 4.146 25 C -0.163 4.163 26 C -0.160 4.160 27 N 0.549 4.451 28 O -0.386 6.386 29 O -0.342 6.342 30 C -0.010 4.010 31 H 0.226 0.774 32 H 0.144 0.856 33 H -0.181 1.181 34 H -0.175 1.175 35 H 0.167 0.833 36 H 0.174 0.826 37 H 0.119 0.881 38 H 0.121 0.879 39 H 0.237 0.763 40 H 0.095 0.905 41 H 0.091 0.909 42 H 0.094 0.906 43 H 0.084 0.916 44 H 0.239 0.761 45 H 0.269 0.731 46 H 0.099 0.901 47 H 0.086 0.914 48 H 0.095 0.905 49 H 0.096 0.904 50 H 0.182 0.818 Dipole moment (debyes) X Y Z Total from point charges 4.370 8.289 1.837 9.549 hybrid contribution -1.738 -1.205 0.564 2.189 sum 2.632 7.084 2.401 7.930 Atomic orbital electron populations 1.86661 1.17211 1.79833 1.49412 1.25077 0.84357 1.11176 0.97582 0.95180 0.91241 0.73748 0.81082 1.20260 1.02204 0.93903 0.99332 1.21271 0.91726 0.99965 0.91214 1.21270 1.07182 0.92646 1.01754 1.18691 0.89926 0.90790 0.85587 1.86497 1.62838 1.37515 1.29439 1.22743 0.96393 0.94925 0.90803 1.19817 0.79318 0.88136 0.82912 1.90864 1.52009 1.17086 1.76782 1.45851 1.52989 1.16127 1.22860 1.21080 0.93743 0.95913 0.85059 0.88894 1.21905 0.99155 1.00791 0.94857 1.21601 0.96270 0.99678 0.97857 1.19777 0.95345 0.98306 0.88944 0.87182 1.24845 1.01991 0.82567 0.99040 1.74301 1.15971 1.22523 1.00343 1.74303 1.19308 0.95473 1.24476 1.26594 0.99672 1.02373 0.84774 1.44140 1.47430 1.09503 1.18278 1.21534 0.98151 1.00824 0.94114 1.21805 0.96364 1.00279 0.97835 1.20584 1.10591 0.84045 1.00774 1.43338 0.99180 1.02288 1.00338 1.94560 1.35268 1.66668 1.42060 1.94693 1.54738 1.67589 1.17209 1.20844 0.93483 0.93566 0.93076 0.77417 0.85601 1.18120 1.17465 0.83327 0.82578 0.88066 0.87936 0.76331 0.90516 0.90940 0.90622 0.91564 0.76088 0.73073 0.90061 0.91375 0.90499 0.90374 0.81802 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 0.54 12.77 -35.23 -0.45 0.09 16 2 C -0.07 0.22 2.82 36.01 0.10 0.32 16 3 Si 0.69 -2.81 29.78 -169.99 -5.06 -7.88 16 4 C -0.16 0.41 5.39 -104.60 -0.56 -0.15 16 5 C -0.02 0.11 8.66 -39.60 -0.34 -0.24 16 6 C -0.21 0.85 9.04 -39.43 -0.36 0.50 16 7 C 0.20 -0.02 6.67 -39.21 -0.26 -0.28 16 8 O -0.25 -0.30 7.68 -49.77 -0.38 -0.68 16 9 C 0.03 -0.11 5.22 36.00 0.19 0.08 16 10 C 0.51 -0.51 7.87 -10.99 -0.09 -0.60 16 11 O -0.50 -2.21 16.16 -14.36 -0.23 -2.45 16 12 N -0.72 3.12 5.08 -53.81 -0.27 2.85 16 13 C 0.15 -0.51 2.46 -67.93 -0.17 -0.68 16 14 H 0.09 -0.13 7.58 -51.93 -0.39 -0.52 16 15 C -0.13 0.41 5.49 -26.73 -0.15 0.26 16 16 C -0.12 0.40 4.97 -26.73 -0.13 0.26 16 17 C 0.00 0.01 2.66 -91.78 -0.24 -0.24 16 18 H 0.11 -0.28 8.14 -51.92 -0.42 -0.70 16 19 C 0.18 0.05 6.99 -154.98 -1.08 -1.03 16 20 N -0.29 -1.27 12.21 32.80 0.40 -0.87 16 21 N -0.30 -1.31 12.21 29.69 0.36 -0.94 16 22 C 0.15 -0.04 13.19 -89.95 -1.19 -1.23 16 23 N -0.58 1.11 5.96 -11.36 -0.07 1.04 16 24 C -0.11 0.38 5.18 -26.73 -0.14 0.25 16 25 C -0.12 0.62 5.39 -26.73 -0.14 0.47 16 26 C -0.08 -0.16 6.87 -79.81 -0.55 -0.71 16 27 N 0.03 0.17 4.45 34.03 0.15 0.32 16 28 O -0.18 -1.19 18.45 -29.46 -0.54 -1.73 16 29 O -0.12 -0.93 17.24 -36.49 -0.63 -1.56 16 30 C 0.01 0.00 9.11 -39.61 -0.36 -0.36 16 31 H 0.38 -1.49 8.70 45.56 0.40 -1.10 16 32 H 0.13 -0.46 7.96 -51.93 -0.41 -0.87 16 33 H -0.26 0.67 7.11 56.52 0.40 1.07 16 34 H -0.25 0.05 7.11 56.52 0.40 0.45 16 35 H 0.15 -1.06 4.87 -52.49 -0.26 -1.31 16 36 H 0.16 -1.21 6.30 -52.49 -0.33 -1.54 16 37 H 0.10 -0.69 7.66 -51.93 -0.40 -1.09 16 38 H 0.10 -0.71 7.66 -51.93 -0.40 -1.11 16 39 H 0.40 -3.07 8.60 -40.82 -0.35 -3.42 16 40 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 41 H 0.07 -0.28 8.14 -51.93 -0.42 -0.71 16 42 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 43 H 0.07 -0.26 7.52 -51.93 -0.39 -0.65 16 44 H 0.22 -1.00 8.06 -52.48 -0.42 -1.42 16 45 H 0.43 -2.21 8.28 -40.82 -0.34 -2.55 16 46 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 47 H 0.07 -0.24 8.14 -51.92 -0.42 -0.66 16 48 H 0.08 -0.45 8.14 -51.93 -0.42 -0.87 16 49 H 0.08 -0.40 8.14 -51.93 -0.42 -0.82 16 50 H 0.16 0.01 7.61 -52.49 -0.40 -0.39 16 LS Contribution 420.14 15.07 6.33 6.33 Total: 0.00 -16.71 420.14 -12.14 -28.85 By element: Atomic # 1 Polarization: -13.72 SS G_CDS: -6.27 Total: -19.99 kcal Atomic # 6 Polarization: 2.10 SS G_CDS: -5.47 Total: -3.37 kcal Atomic # 7 Polarization: 1.82 SS G_CDS: 0.57 Total: 2.39 kcal Atomic # 8 Polarization: -4.10 SS G_CDS: -2.24 Total: -6.34 kcal Atomic # 14 Polarization: -2.81 SS G_CDS: -5.06 Total: -7.88 kcal Total LS contribution 6.33 Total: 6.33 kcal Total: -16.71 -12.14 -28.85 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16624780_4549638.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 33.577 kcal (2) G-P(sol) polarization free energy of solvation -16.705 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 16.872 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.142 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.847 kcal (6) G-S(sol) free energy of system = (1) + (5) 4.731 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.45 seconds