Wall clock time and date at job start Sun Mar 7 2021 05:36:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86305 * 109.47203 * 2 1 4 4 C 1.50703 * 109.47088 * 119.99650 * 2 1 3 5 5 C 1.38260 * 119.94677 * 65.00327 * 4 2 1 6 6 C 1.38146 * 120.05916 * 180.02562 * 5 4 2 7 7 C 1.38722 * 119.94330 * 359.97438 * 6 5 4 8 8 O 1.35899 * 120.05849 * 180.02562 * 7 6 5 9 9 C 1.42895 * 117.00454 * 180.02562 * 8 7 6 10 10 F 1.39903 * 109.47215 * 60.00066 * 9 8 7 11 11 F 1.39901 * 109.47252 * 300.00444 * 9 8 7 12 12 C 1.50703 * 109.47270 * 179.97438 * 9 8 7 13 13 O 1.21273 * 119.99921 * 0.02562 * 12 9 8 14 14 N 1.34778 * 119.99935 * 180.02562 * 12 9 8 15 15 C 1.46496 * 120.00072 * 179.97438 * 14 12 9 16 16 H 1.09002 * 109.47021 * 34.99856 * 15 14 12 17 17 C 1.53005 * 109.47414 * 154.99744 * 15 14 12 18 18 C 1.52997 * 109.47452 * 180.02562 * 17 15 14 19 19 C 1.53002 * 109.46817 * 300.00239 * 18 17 15 20 20 H 1.08992 * 109.47063 * 299.99823 * 19 18 17 21 21 C 1.50706 * 109.46783 * 179.97438 * 19 18 17 22 22 N 1.30519 * 126.33932 * 144.68773 * 21 19 18 23 23 N 1.28604 * 109.66750 * 179.82526 * 22 21 19 24 24 C 1.30517 * 109.67232 * 0.45379 * 23 22 21 25 25 N 1.35491 * 107.30841 * 359.72597 * 24 23 22 26 26 C 1.53000 * 109.47233 * 60.00194 * 19 18 17 27 27 C 1.52997 * 109.47060 * 299.99657 * 26 19 18 28 28 C 1.38736 * 119.89006 * 0.27694 * 7 6 5 29 29 C 1.38149 * 119.94226 * 359.42931 * 28 7 6 30 30 H 0.96703 * 114.00062 * 299.99996 * 1 2 3 31 31 H 1.08994 * 109.47308 * 239.99867 * 2 1 3 32 32 H 1.48500 * 109.99633 * 299.99834 * 3 2 1 33 33 H 1.48499 * 110.00071 * 61.31766 * 3 2 1 34 34 H 1.08002 * 119.96854 * 0.02562 * 5 4 2 35 35 H 1.07997 * 120.02375 * 179.97438 * 6 5 4 36 36 H 0.97007 * 120.00235 * 359.97438 * 14 12 9 37 37 H 1.09002 * 109.46935 * 60.00059 * 17 15 14 38 38 H 1.09001 * 109.46812 * 300.00401 * 17 15 14 39 39 H 1.08993 * 109.47194 * 179.97438 * 18 17 15 40 40 H 1.09002 * 109.46695 * 59.99734 * 18 17 15 41 41 H 1.08008 * 126.34508 * 179.73475 * 24 23 22 42 42 H 0.97004 * 126.98236 * 180.02562 * 25 24 23 43 43 H 1.09002 * 109.47398 * 59.99826 * 26 19 18 44 44 H 1.09001 * 109.47194 * 180.02562 * 26 19 18 45 45 H 1.08996 * 109.47853 * 180.02562 * 27 26 19 46 46 H 1.09002 * 109.47153 * 300.00319 * 27 26 19 47 47 H 1.08002 * 120.02867 * 179.71842 * 28 7 6 48 48 H 1.07993 * 119.97065 * 180.31327 * 29 28 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 1.2305 5 6 1.6841 -2.0604 1.3974 6 6 2.1430 -2.7138 2.5247 7 6 2.8530 -2.0142 3.4896 8 8 3.3060 -2.6547 4.5993 9 6 4.0290 -1.8714 5.5509 10 9 3.2120 -0.8375 6.0209 11 9 5.1645 -1.3276 4.9409 12 6 4.4479 -2.7444 6.7057 13 8 4.1564 -3.9216 6.7128 14 7 5.1464 -2.2169 7.7305 15 6 5.5531 -3.0654 8.8534 16 1 5.7890 -4.0645 8.4870 17 6 6.7888 -2.4639 9.5258 18 6 7.2140 -3.3503 10.6981 19 6 6.0721 -3.4362 11.7128 20 1 5.8361 -2.4374 12.0796 21 6 6.4906 -4.3099 12.8672 22 7 6.1622 -4.1464 14.1198 23 7 6.6920 -5.0775 14.8313 24 6 7.3903 -5.8716 14.0663 25 7 7.2824 -5.4072 12.7981 26 6 4.8364 -4.0379 11.0404 27 6 4.4113 -3.1514 9.8681 28 6 3.0953 -0.6585 3.3224 29 6 2.6394 -0.0110 2.1904 30 1 -0.3933 0.4417 0.7651 31 1 1.7923 -0.5138 -0.8899 32 1 1.5615 2.4678 -1.2085 33 1 1.5879 2.4586 1.2242 34 1 1.1317 -2.6046 0.6457 35 1 1.9492 -3.7682 2.6547 36 1 5.3799 -1.2754 7.7247 37 1 6.5529 -1.4647 9.8922 38 1 7.6024 -2.4030 8.8030 39 1 8.0945 -2.9220 11.1768 40 1 7.4499 -4.3493 10.3312 41 1 7.9502 -6.7384 14.3852 42 1 7.6891 -5.7840 12.0021 43 1 5.0725 -5.0368 10.6736 44 1 4.0228 -4.0986 11.7632 45 1 3.5308 -3.5796 9.3893 46 1 4.1753 -2.1524 10.2349 47 1 3.6438 -0.1107 4.0744 48 1 2.8322 1.0432 2.0574 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16624780_4549640.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:36:39 Heat of formation + Delta-G solvation = -95.121024 kcal Electronic energy + Delta-G solvation = -36674.603383 eV Core-core repulsion = 31368.664659 eV Total energy + Delta-G solvation = -5305.938723 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 395.149 amu Computer time = 1.30 seconds Orbital eigenvalues (eV) -50.85783 -48.83405 -44.17123 -41.57632 -41.27445 -39.73753 -39.17166 -37.36747 -36.15191 -34.66636 -32.77584 -32.41423 -32.21091 -32.01668 -30.20715 -28.58773 -26.35671 -25.08115 -24.41615 -24.18417 -23.52864 -22.72652 -22.35228 -22.12524 -21.39011 -20.52849 -19.82681 -19.64199 -19.43864 -18.63146 -17.81809 -17.53234 -17.12147 -16.92826 -16.76425 -16.47056 -16.44414 -16.27459 -16.04913 -15.82596 -15.72424 -15.46967 -15.41745 -15.31216 -15.19192 -15.08331 -15.03595 -14.49120 -14.37527 -14.30206 -14.18049 -14.01265 -13.61954 -13.52555 -13.00582 -12.98147 -12.73322 -12.55486 -12.44168 -12.40433 -12.24138 -11.96690 -11.85338 -11.79513 -11.71543 -11.51427 -11.34478 -10.65649 -10.62309 -10.23020 -10.17590 -9.56983 -5.01551 0.04529 0.16402 0.45359 0.66360 0.76664 1.22544 1.53512 1.70355 1.72740 1.88589 1.91380 1.98144 2.46398 2.66361 2.98950 3.21394 3.24200 3.30229 3.32123 3.52137 3.58214 3.63347 3.70818 3.71364 3.77656 3.85487 3.98968 4.00139 4.06279 4.08417 4.18503 4.26451 4.29563 4.38219 4.40771 4.47314 4.52640 4.61314 4.65357 4.71055 4.80377 4.83139 4.85944 4.91949 4.95802 5.05725 5.06282 5.07042 5.34698 5.38196 5.71249 5.85960 5.98798 6.34845 6.35106 7.71879 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.529 6.529 2 C -0.072 4.072 3 Si 0.683 3.317 4 C -0.140 4.140 5 C -0.055 4.055 6 C -0.126 4.126 7 C 0.107 3.893 8 O -0.286 6.286 9 C 0.431 3.569 10 F -0.175 7.175 11 F -0.174 7.174 12 C 0.518 3.482 13 O -0.467 6.467 14 N -0.701 5.701 15 C 0.143 3.857 16 H 0.098 0.902 17 C -0.125 4.125 18 C -0.114 4.114 19 C -0.004 4.004 20 H 0.112 0.888 21 C 0.185 3.815 22 N -0.289 5.289 23 N -0.295 5.295 24 C 0.155 3.845 25 N -0.581 5.581 26 C -0.107 4.107 27 C -0.132 4.132 28 C -0.187 4.187 29 C -0.079 4.079 30 H 0.376 0.624 31 H 0.120 0.880 32 H -0.255 1.255 33 H -0.260 1.260 34 H 0.140 0.860 35 H 0.141 0.859 36 H 0.410 0.590 37 H 0.080 0.920 38 H 0.081 0.919 39 H 0.080 0.920 40 H 0.067 0.933 41 H 0.223 0.777 42 H 0.429 0.571 43 H 0.068 0.932 44 H 0.081 0.919 45 H 0.078 0.922 46 H 0.076 0.924 47 H 0.136 0.864 48 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.950 0.696 -2.261 6.403 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.335 6.335 2 C -0.181 4.181 3 Si 0.585 3.415 4 C -0.141 4.141 5 C -0.073 4.073 6 C -0.145 4.145 7 C 0.064 3.936 8 O -0.203 6.203 9 C 0.353 3.647 10 F -0.156 7.156 11 F -0.156 7.156 12 C 0.295 3.705 13 O -0.337 6.337 14 N -0.354 5.354 15 C 0.040 3.960 16 H 0.116 0.884 17 C -0.163 4.163 18 C -0.152 4.152 19 C -0.025 4.025 20 H 0.130 0.870 21 C -0.085 4.085 22 N -0.130 5.130 23 N -0.135 5.135 24 C -0.134 4.134 25 N -0.194 5.194 26 C -0.146 4.146 27 C -0.170 4.170 28 C -0.205 4.205 29 C -0.096 4.096 30 H 0.224 0.776 31 H 0.138 0.862 32 H -0.180 1.180 33 H -0.185 1.185 34 H 0.157 0.843 35 H 0.159 0.841 36 H 0.246 0.754 37 H 0.099 0.901 38 H 0.100 0.900 39 H 0.099 0.901 40 H 0.086 0.914 41 H 0.239 0.761 42 H 0.268 0.732 43 H 0.086 0.914 44 H 0.099 0.901 45 H 0.096 0.904 46 H 0.095 0.905 47 H 0.154 0.846 48 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges 4.903 0.826 -1.342 5.150 hybrid contribution 0.026 -0.220 -0.946 0.972 sum 4.929 0.606 -2.288 5.468 Atomic orbital electron populations 1.86611 1.17608 1.79945 1.49350 1.24982 0.84009 1.10921 0.98237 0.95016 0.91644 0.74552 0.80325 1.20310 1.01209 0.95054 0.97478 1.20904 0.96687 0.93508 0.96227 1.20535 0.99907 1.01123 0.92912 1.18983 0.96646 0.91585 0.86388 1.86668 1.67945 1.36281 1.29366 1.21840 0.76549 0.79566 0.86708 1.93198 1.73205 1.60638 1.88572 1.93196 1.51497 1.86606 1.84267 1.19312 0.80712 0.87941 0.82511 1.90875 1.51709 1.14325 1.76804 1.45883 1.55134 1.14439 1.19967 1.21289 0.94518 0.95338 0.84831 0.88379 1.21795 0.96836 1.00132 0.97575 1.21585 0.97892 1.00696 0.95062 1.19791 0.95622 0.98090 0.88984 0.87015 1.24819 0.96113 0.90498 0.97023 1.74317 1.20611 1.18461 0.99603 1.74319 1.10308 1.02114 1.26742 1.26599 1.03361 1.02843 0.80583 1.44127 1.40039 1.23817 1.11430 1.21547 0.96971 0.99030 0.97093 1.21962 0.98340 1.01415 0.95316 1.21467 1.05148 0.93059 1.00829 1.20855 0.96362 0.99724 0.92675 0.77586 0.86201 1.18017 1.18480 0.84253 0.84140 0.75375 0.90086 0.90025 0.90109 0.91425 0.76076 0.73159 0.91355 0.90060 0.90380 0.90502 0.84648 0.84805 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.44 12.83 -35.23 -0.45 -0.90 16 2 C -0.07 0.05 2.80 36.01 0.10 0.15 16 3 Si 0.68 -0.88 29.88 -169.99 -5.08 -5.96 16 4 C -0.14 0.01 5.35 -104.60 -0.56 -0.55 16 5 C -0.06 -0.01 9.68 -39.61 -0.38 -0.40 16 6 C -0.13 -0.14 9.99 -39.44 -0.39 -0.53 16 7 C 0.11 0.22 6.48 -39.22 -0.25 -0.03 16 8 O -0.29 -0.81 9.60 -39.33 -0.38 -1.19 16 9 C 0.43 0.34 2.05 36.01 0.07 0.41 16 10 F -0.17 -0.06 15.28 2.25 0.03 -0.03 16 11 F -0.17 0.00 15.31 2.25 0.03 0.03 16 12 C 0.52 0.24 7.31 -10.98 -0.08 0.15 16 13 O -0.47 -1.72 16.16 -14.35 -0.23 -1.95 16 14 N -0.70 2.11 5.08 -53.81 -0.27 1.84 16 15 C 0.14 -0.53 2.45 -67.93 -0.17 -0.70 16 16 H 0.10 -0.25 7.58 -51.93 -0.39 -0.64 16 17 C -0.13 0.71 5.39 -26.73 -0.14 0.56 16 18 C -0.11 0.60 4.97 -26.73 -0.13 0.47 16 19 C 0.00 0.01 2.66 -91.77 -0.24 -0.23 16 20 H 0.11 -0.33 8.14 -51.93 -0.42 -0.75 16 21 C 0.18 -0.04 6.99 -154.99 -1.08 -1.12 16 22 N -0.29 -1.19 12.21 32.80 0.40 -0.79 16 23 N -0.30 -1.22 12.21 29.69 0.36 -0.85 16 24 C 0.16 -0.12 13.19 -89.95 -1.19 -1.30 16 25 N -0.58 1.52 5.96 -11.36 -0.07 1.46 16 26 C -0.11 0.32 5.18 -26.73 -0.14 0.18 16 27 C -0.13 0.41 5.50 -26.73 -0.15 0.26 16 28 C -0.19 -0.18 8.26 -39.43 -0.33 -0.51 16 29 C -0.08 0.01 8.66 -39.60 -0.34 -0.33 16 30 H 0.38 -0.70 8.70 45.56 0.40 -0.30 16 31 H 0.12 -0.19 7.96 -51.93 -0.41 -0.60 16 32 H -0.26 -0.52 7.11 56.52 0.40 -0.12 16 33 H -0.26 -0.15 7.01 56.52 0.40 0.25 16 34 H 0.14 -0.14 8.06 -52.49 -0.42 -0.56 16 35 H 0.14 0.00 8.06 -52.49 -0.42 -0.43 16 36 H 0.41 -2.20 8.60 -40.82 -0.35 -2.55 16 37 H 0.08 -0.51 8.14 -51.93 -0.42 -0.93 16 38 H 0.08 -0.48 8.14 -51.93 -0.42 -0.91 16 39 H 0.08 -0.41 8.14 -51.93 -0.42 -0.83 16 40 H 0.07 -0.42 7.52 -51.93 -0.39 -0.81 16 41 H 0.22 -1.11 8.06 -52.48 -0.42 -1.54 16 42 H 0.43 -2.64 8.28 -40.82 -0.34 -2.98 16 43 H 0.07 -0.21 8.14 -51.93 -0.42 -0.63 16 44 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 45 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 46 H 0.08 -0.28 8.14 -51.93 -0.42 -0.71 16 47 H 0.14 0.01 5.10 -52.49 -0.27 -0.26 16 48 H 0.13 -0.26 4.83 -52.49 -0.25 -0.51 16 LS Contribution 403.43 15.07 6.08 6.08 Total: 0.00 -11.80 403.43 -10.84 -22.64 By element: Atomic # 1 Polarization: -10.99 SS G_CDS: -5.87 Total: -16.86 kcal Atomic # 6 Polarization: 1.88 SS G_CDS: -5.41 Total: -3.52 kcal Atomic # 7 Polarization: 1.23 SS G_CDS: 0.42 Total: 1.65 kcal Atomic # 8 Polarization: -2.98 SS G_CDS: -1.06 Total: -4.04 kcal Atomic # 9 Polarization: -0.06 SS G_CDS: 0.07 Total: 0.01 kcal Atomic # 14 Polarization: -0.88 SS G_CDS: -5.08 Total: -5.96 kcal Total LS contribution 6.08 Total: 6.08 kcal Total: -11.80 -10.84 -22.64 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16624780_4549640.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -72.477 kcal (2) G-P(sol) polarization free energy of solvation -11.801 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -84.279 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.843 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.644 kcal (6) G-S(sol) free energy of system = (1) + (5) -95.121 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.30 seconds