Wall clock time and date at job start Sun Mar 7 2021 05:36:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86305 * 109.47203 * 2 1 4 4 C 1.50703 * 109.47088 * 119.99650 * 2 1 3 5 5 C 1.38260 * 119.94677 * 65.00327 * 4 2 1 6 6 C 1.38146 * 120.05916 * 180.02562 * 5 4 2 7 7 C 1.38722 * 119.94330 * 359.97438 * 6 5 4 8 8 O 1.35899 * 120.05849 * 180.02562 * 7 6 5 9 9 C 1.42895 * 117.00454 * 180.02562 * 8 7 6 10 10 F 1.39903 * 109.47215 * 60.00066 * 9 8 7 11 11 F 1.39901 * 109.47252 * 300.00444 * 9 8 7 12 12 C 1.50703 * 109.47270 * 179.97438 * 9 8 7 13 13 O 1.21273 * 119.99921 * 0.02562 * 12 9 8 14 14 N 1.34778 * 119.99935 * 180.02562 * 12 9 8 15 15 C 1.46496 * 120.00072 * 179.97438 * 14 12 9 16 16 H 1.09002 * 109.47021 * 34.99856 * 15 14 12 17 17 C 1.53005 * 109.47414 * 154.99744 * 15 14 12 18 18 C 1.52997 * 109.47452 * 180.02562 * 17 15 14 19 19 C 1.53002 * 109.46817 * 300.00239 * 18 17 15 20 20 H 1.08992 * 109.47063 * 299.99823 * 19 18 17 21 21 C 1.50706 * 109.46783 * 179.97438 * 19 18 17 22 22 N 1.30519 * 126.33932 * 144.68773 * 21 19 18 23 23 N 1.28604 * 109.66750 * 179.82526 * 22 21 19 24 24 C 1.30517 * 109.67232 * 0.45379 * 23 22 21 25 25 N 1.35491 * 107.30841 * 359.72597 * 24 23 22 26 26 C 1.53000 * 109.47233 * 60.00194 * 19 18 17 27 27 C 1.52997 * 109.47060 * 299.99657 * 26 19 18 28 28 C 1.38736 * 119.89006 * 0.27694 * 7 6 5 29 29 C 1.38149 * 119.94226 * 359.42931 * 28 7 6 30 30 H 0.96703 * 114.00062 * 299.99996 * 1 2 3 31 31 H 1.08994 * 109.47308 * 239.99867 * 2 1 3 32 32 H 1.48500 * 109.99633 * 299.99834 * 3 2 1 33 33 H 1.48499 * 110.00071 * 61.31766 * 3 2 1 34 34 H 1.08002 * 119.96854 * 0.02562 * 5 4 2 35 35 H 1.07997 * 120.02375 * 179.97438 * 6 5 4 36 36 H 0.97007 * 120.00235 * 359.97438 * 14 12 9 37 37 H 1.09002 * 109.46935 * 60.00059 * 17 15 14 38 38 H 1.09001 * 109.46812 * 300.00401 * 17 15 14 39 39 H 1.08993 * 109.47194 * 179.97438 * 18 17 15 40 40 H 1.09002 * 109.46695 * 59.99734 * 18 17 15 41 41 H 1.08008 * 126.34508 * 179.73475 * 24 23 22 42 42 H 0.97004 * 126.98236 * 180.02562 * 25 24 23 43 43 H 1.09002 * 109.47398 * 59.99826 * 26 19 18 44 44 H 1.09001 * 109.47194 * 180.02562 * 26 19 18 45 45 H 1.08996 * 109.47853 * 180.02562 * 27 26 19 46 46 H 1.09002 * 109.47153 * 300.00319 * 27 26 19 47 47 H 1.08002 * 120.02867 * 179.71842 * 28 7 6 48 48 H 1.07993 * 119.97065 * 180.31327 * 29 28 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 1.2305 5 6 1.6841 -2.0604 1.3974 6 6 2.1430 -2.7138 2.5247 7 6 2.8530 -2.0142 3.4896 8 8 3.3060 -2.6547 4.5993 9 6 4.0290 -1.8714 5.5509 10 9 3.2120 -0.8375 6.0209 11 9 5.1645 -1.3276 4.9409 12 6 4.4479 -2.7444 6.7057 13 8 4.1564 -3.9216 6.7128 14 7 5.1464 -2.2169 7.7305 15 6 5.5531 -3.0654 8.8534 16 1 5.7890 -4.0645 8.4870 17 6 6.7888 -2.4639 9.5258 18 6 7.2140 -3.3503 10.6981 19 6 6.0721 -3.4362 11.7128 20 1 5.8361 -2.4374 12.0796 21 6 6.4906 -4.3099 12.8672 22 7 6.1622 -4.1464 14.1198 23 7 6.6920 -5.0775 14.8313 24 6 7.3903 -5.8716 14.0663 25 7 7.2824 -5.4072 12.7981 26 6 4.8364 -4.0379 11.0404 27 6 4.4113 -3.1514 9.8681 28 6 3.0953 -0.6585 3.3224 29 6 2.6394 -0.0110 2.1904 30 1 -0.3933 0.4417 0.7651 31 1 1.7923 -0.5138 -0.8899 32 1 1.5615 2.4678 -1.2085 33 1 1.5879 2.4586 1.2242 34 1 1.1317 -2.6046 0.6457 35 1 1.9492 -3.7682 2.6547 36 1 5.3799 -1.2754 7.7247 37 1 6.5529 -1.4647 9.8922 38 1 7.6024 -2.4030 8.8030 39 1 8.0945 -2.9220 11.1768 40 1 7.4499 -4.3493 10.3312 41 1 7.9502 -6.7384 14.3852 42 1 7.6891 -5.7840 12.0021 43 1 5.0725 -5.0368 10.6736 44 1 4.0228 -4.0986 11.7632 45 1 3.5308 -3.5796 9.3893 46 1 4.1753 -2.1524 10.2349 47 1 3.6438 -0.1107 4.0744 48 1 2.8322 1.0432 2.0574 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16624780_4549640.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:36:37 Heat of formation + Delta-G solvation = -95.910439 kcal Electronic energy + Delta-G solvation = -36674.637614 eV Core-core repulsion = 31368.664659 eV Total energy + Delta-G solvation = -5305.972955 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 395.149 amu Computer time = 1.60 seconds Orbital eigenvalues (eV) -50.88581 -48.85555 -44.13747 -41.55052 -41.27244 -39.63098 -39.16216 -37.38454 -36.06647 -34.61567 -32.69456 -32.41221 -32.03235 -31.90834 -30.16158 -28.55301 -26.34230 -24.98971 -24.34586 -23.95765 -23.45754 -22.72570 -22.31501 -22.01725 -21.18649 -20.53495 -19.77139 -19.67626 -19.29531 -18.62502 -17.77291 -17.49774 -17.06927 -16.89463 -16.74240 -16.44023 -16.37648 -16.23243 -15.97299 -15.80466 -15.67096 -15.42160 -15.35891 -15.18636 -15.15057 -15.10137 -14.91066 -14.43695 -14.39388 -14.22151 -14.16287 -13.76910 -13.55529 -13.31444 -13.03409 -12.88012 -12.52280 -12.43630 -12.36151 -12.24659 -12.22023 -11.82543 -11.75857 -11.71108 -11.58527 -11.47258 -11.30022 -10.63853 -10.49085 -10.24217 -10.18869 -9.61048 -4.93250 0.01147 0.15270 0.47179 0.64514 0.86949 1.29478 1.58201 1.67869 1.86114 1.90661 1.94880 2.00863 2.44614 2.76182 3.18344 3.23047 3.39866 3.52296 3.54425 3.57692 3.64864 3.71296 3.82471 3.96894 4.05640 4.09282 4.17588 4.19805 4.25449 4.27245 4.38678 4.39237 4.43539 4.48706 4.54621 4.58899 4.76155 4.82678 4.89069 4.89971 5.00753 5.03023 5.04051 5.06276 5.07720 5.15086 5.22667 5.32348 5.34092 5.38427 5.81890 5.87418 6.26659 6.47117 6.47478 7.72002 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.547 6.547 2 C -0.078 4.078 3 Si 0.762 3.238 4 C -0.139 4.139 5 C -0.057 4.057 6 C -0.136 4.136 7 C 0.087 3.913 8 O -0.305 6.305 9 C 0.432 3.568 10 F -0.173 7.173 11 F -0.169 7.169 12 C 0.518 3.482 13 O -0.506 6.506 14 N -0.681 5.681 15 C 0.143 3.857 16 H 0.089 0.911 17 C -0.117 4.117 18 C -0.108 4.108 19 C 0.002 3.998 20 H 0.109 0.891 21 C 0.192 3.808 22 N -0.345 5.345 23 N -0.357 5.357 24 C 0.169 3.831 25 N -0.567 5.567 26 C -0.101 4.101 27 C -0.127 4.127 28 C -0.193 4.193 29 C -0.079 4.079 30 H 0.386 0.614 31 H 0.130 0.870 32 H -0.301 1.301 33 H -0.281 1.281 34 H 0.150 0.850 35 H 0.145 0.855 36 H 0.424 0.576 37 H 0.093 0.907 38 H 0.094 0.906 39 H 0.087 0.913 40 H 0.081 0.919 41 H 0.261 0.739 42 H 0.447 0.553 43 H 0.070 0.930 44 H 0.062 0.938 45 H 0.056 0.944 46 H 0.085 0.915 47 H 0.142 0.858 48 H 0.152 0.848 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.505 1.101 -3.054 8.177 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.355 6.355 2 C -0.187 4.187 3 Si 0.668 3.332 4 C -0.139 4.139 5 C -0.075 4.075 6 C -0.155 4.155 7 C 0.044 3.956 8 O -0.222 6.222 9 C 0.355 3.645 10 F -0.154 7.154 11 F -0.151 7.151 12 C 0.296 3.704 13 O -0.380 6.380 14 N -0.334 5.334 15 C 0.041 3.959 16 H 0.108 0.892 17 C -0.155 4.155 18 C -0.147 4.147 19 C -0.019 4.019 20 H 0.127 0.873 21 C -0.079 4.079 22 N -0.185 5.185 23 N -0.195 5.195 24 C -0.121 4.121 25 N -0.182 5.182 26 C -0.140 4.140 27 C -0.165 4.165 28 C -0.211 4.211 29 C -0.096 4.096 30 H 0.235 0.765 31 H 0.148 0.852 32 H -0.230 1.230 33 H -0.208 1.208 34 H 0.168 0.832 35 H 0.162 0.838 36 H 0.262 0.738 37 H 0.111 0.889 38 H 0.113 0.887 39 H 0.105 0.895 40 H 0.099 0.901 41 H 0.277 0.723 42 H 0.290 0.710 43 H 0.089 0.911 44 H 0.081 0.919 45 H 0.075 0.925 46 H 0.103 0.897 47 H 0.160 0.840 48 H 0.170 0.830 Dipole moment (debyes) X Y Z Total from point charges 6.487 1.246 -2.117 6.937 hybrid contribution -0.484 -0.340 -0.733 0.942 sum 6.004 0.906 -2.850 6.708 Atomic orbital electron populations 1.86584 1.18408 1.80334 1.50185 1.25176 0.83447 1.11642 0.98404 0.94117 0.90352 0.72241 0.76511 1.20406 1.00909 0.94979 0.97620 1.21069 0.96521 0.93823 0.96124 1.20704 1.00076 1.01530 0.93171 1.19238 0.97505 0.92262 0.86606 1.86642 1.68395 1.37290 1.29917 1.21849 0.76533 0.79583 0.86559 1.93196 1.73227 1.60507 1.88503 1.93199 1.51137 1.86510 1.84223 1.19371 0.80746 0.87416 0.82897 1.90856 1.53604 1.15828 1.77676 1.45860 1.53395 1.15228 1.18954 1.21367 0.95103 0.95189 0.84276 0.89247 1.21771 0.95924 1.00420 0.97407 1.21574 0.96943 1.01753 0.94389 1.19853 0.96231 0.97282 0.88570 0.87274 1.25201 0.95317 0.90886 0.96543 1.74193 1.22742 1.19974 1.01572 1.74197 1.12798 1.03770 1.28767 1.27290 1.01664 1.02546 0.80606 1.44063 1.39337 1.22990 1.11786 1.21446 0.96601 0.99303 0.96627 1.21888 0.97831 1.01608 0.95204 1.21604 1.05372 0.92760 1.01413 1.21060 0.95877 1.00540 0.92167 0.76451 0.85191 1.22963 1.20802 0.83210 0.83769 0.73757 0.88853 0.88734 0.89486 0.90067 0.72332 0.70981 0.91123 0.91877 0.92496 0.89658 0.84037 0.83047 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.72 12.83 -148.98 -1.91 -2.63 16 2 C -0.08 0.16 2.80 71.24 0.20 0.35 16 3 Si 0.76 -2.35 29.88 68.60 2.05 -0.30 16 4 C -0.14 0.09 5.35 -19.85 -0.11 -0.02 16 5 C -0.06 -0.03 9.68 22.25 0.22 0.19 16 6 C -0.14 -0.39 9.99 22.36 0.22 -0.17 16 7 C 0.09 0.42 6.48 22.50 0.15 0.57 16 8 O -0.31 -2.09 9.60 -73.38 -0.70 -2.80 16 9 C 0.43 0.88 2.05 71.24 0.15 1.03 16 10 F -0.17 -0.16 15.28 44.97 0.69 0.53 16 11 F -0.17 0.02 15.31 44.97 0.69 0.70 16 12 C 0.52 0.75 7.31 87.66 0.64 1.39 16 13 O -0.51 -4.40 16.16 16.03 0.26 -4.15 16 14 N -0.68 4.42 5.08 -442.54 -2.25 2.17 16 15 C 0.14 -1.14 2.45 44.99 0.11 -1.03 16 16 H 0.09 -0.48 7.58 -2.39 -0.02 -0.50 16 17 C -0.12 1.54 5.39 30.60 0.16 1.71 16 18 C -0.11 1.31 4.97 30.59 0.15 1.47 16 19 C 0.00 -0.01 2.66 -11.54 -0.03 -0.04 16 20 H 0.11 -0.63 8.14 -2.39 -0.02 -0.65 16 21 C 0.19 -0.03 6.99 137.98 0.96 0.93 16 22 N -0.35 -3.37 12.21 -50.15 -0.61 -3.98 16 23 N -0.36 -3.37 12.21 -59.99 -0.73 -4.10 16 24 C 0.17 -0.32 13.19 180.11 2.37 2.05 16 25 N -0.57 3.40 5.96 -189.86 -1.13 2.27 16 26 C -0.10 0.54 5.18 30.59 0.16 0.69 16 27 C -0.13 0.74 5.50 30.59 0.17 0.90 16 28 C -0.19 -0.37 8.26 22.37 0.18 -0.19 16 29 C -0.08 0.07 8.66 22.26 0.19 0.26 16 30 H 0.39 -1.52 8.70 -74.06 -0.64 -2.17 16 31 H 0.13 -0.53 7.96 -2.39 -0.02 -0.55 16 32 H -0.30 -1.44 7.11 99.48 0.71 -0.73 16 33 H -0.28 -0.14 7.01 99.48 0.70 0.56 16 34 H 0.15 -0.33 8.06 -2.91 -0.02 -0.35 16 35 H 0.14 0.17 8.06 -2.91 -0.02 0.14 16 36 H 0.42 -5.04 8.60 -92.70 -0.80 -5.84 16 37 H 0.09 -1.39 8.14 -2.39 -0.02 -1.41 16 38 H 0.09 -1.38 8.14 -2.39 -0.02 -1.40 16 39 H 0.09 -1.07 8.14 -2.39 -0.02 -1.09 16 40 H 0.08 -1.18 7.52 -2.39 -0.02 -1.19 16 41 H 0.26 -3.04 8.06 -2.91 -0.02 -3.06 16 42 H 0.45 -6.25 8.28 -92.71 -0.77 -7.02 16 43 H 0.07 -0.41 8.14 -2.39 -0.02 -0.43 16 44 H 0.06 -0.09 8.14 -2.39 -0.02 -0.11 16 45 H 0.06 -0.05 8.14 -2.39 -0.02 -0.07 16 46 H 0.08 -0.64 8.14 -2.39 -0.02 -0.66 16 47 H 0.14 -0.01 5.10 -2.91 -0.01 -0.02 16 48 H 0.15 -0.77 4.83 -2.91 -0.01 -0.78 16 Total: 0.00 -30.64 403.43 1.13 -29.51 By element: Atomic # 1 Polarization: -26.21 SS G_CDS: -1.12 Total: -27.33 kcal Atomic # 6 Polarization: 4.20 SS G_CDS: 5.90 Total: 10.10 kcal Atomic # 7 Polarization: 1.08 SS G_CDS: -4.72 Total: -3.64 kcal Atomic # 8 Polarization: -7.22 SS G_CDS: -2.36 Total: -9.57 kcal Atomic # 9 Polarization: -0.14 SS G_CDS: 1.38 Total: 1.24 kcal Atomic # 14 Polarization: -2.35 SS G_CDS: 2.05 Total: -0.30 kcal Total: -30.64 1.13 -29.51 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16624780_4549640.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -66.400 kcal (2) G-P(sol) polarization free energy of solvation -30.643 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -97.042 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.132 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.511 kcal (6) G-S(sol) free energy of system = (1) + (5) -95.910 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.60 seconds