Wall clock time and date at job start Sun Mar 7 2021 05:36:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86302 * 109.46897 * 2 1 4 4 C 1.50700 * 109.47440 * 239.99541 * 2 1 3 5 5 C 1.38242 * 119.96979 * 119.97587 * 4 2 1 6 6 C 1.38293 * 120.11311 * 180.02562 * 5 4 2 7 7 C 1.38123 * 120.05117 * 359.77169 * 6 5 4 8 8 C 1.38757 * 119.94210 * 0.50347 * 7 6 5 9 9 O 1.35904 * 120.04956 * 179.74331 * 8 7 6 10 10 C 1.42891 * 117.00388 * 359.73217 * 9 8 7 11 11 C 1.50697 * 109.47367 * 179.97438 * 10 9 8 12 12 O 1.21282 * 119.99877 * 359.97438 * 11 10 9 13 13 N 1.34780 * 120.00390 * 179.97438 * 11 10 9 14 14 C 1.46496 * 120.00154 * 179.97438 * 13 11 10 15 15 H 1.08999 * 109.47525 * 35.00177 * 14 13 11 16 16 C 1.53002 * 109.47152 * 155.00328 * 14 13 11 17 17 C 1.52998 * 109.47510 * 180.02562 * 16 14 13 18 18 C 1.53001 * 109.46824 * 299.99883 * 17 16 14 19 19 H 1.09005 * 109.47314 * 299.99900 * 18 17 16 20 20 C 1.50703 * 109.47311 * 179.97438 * 18 17 16 21 21 N 1.30523 * 126.34553 * 94.68583 * 20 18 17 22 22 N 1.28588 * 109.67223 * 180.26646 * 21 20 18 23 23 C 1.30519 * 109.67901 * 0.02562 * 22 21 20 24 24 N 1.35495 * 126.34870 * 275.00397 * 20 18 17 25 25 C 1.53000 * 109.47506 * 59.99836 * 18 17 16 26 26 C 1.53001 * 109.47316 * 275.00293 * 14 13 11 27 27 C 1.38157 * 119.97459 * 300.00085 * 4 2 1 28 28 H 0.96696 * 113.99635 * 60.00204 * 1 2 3 29 29 H 1.09001 * 109.46789 * 119.99580 * 2 1 3 30 30 H 1.48500 * 109.99771 * 298.67586 * 3 2 1 31 31 H 1.48497 * 110.00221 * 59.99862 * 3 2 1 32 32 H 1.08006 * 119.94416 * 0.03008 * 5 4 2 33 33 H 1.07993 * 119.97286 * 180.02562 * 6 5 4 34 34 H 1.08003 * 120.02658 * 180.27973 * 7 6 5 35 35 H 1.09000 * 109.47724 * 59.99808 * 10 9 8 36 36 H 1.09000 * 109.47435 * 299.99656 * 10 9 8 37 37 H 0.96998 * 119.99892 * 0.02562 * 13 11 10 38 38 H 1.09001 * 109.47386 * 59.99933 * 16 14 13 39 39 H 1.09004 * 109.47016 * 299.99811 * 16 14 13 40 40 H 1.08998 * 109.47557 * 180.02562 * 17 16 14 41 41 H 1.09001 * 109.47165 * 59.99413 * 17 16 14 42 42 H 1.07994 * 126.34922 * 180.02562 * 23 22 21 43 43 H 0.96998 * 126.97396 * 359.73450 * 24 20 18 44 44 H 1.09005 * 109.46782 * 59.99738 * 25 18 17 45 45 H 1.08996 * 109.47631 * 179.97438 * 25 18 17 46 46 H 1.09001 * 109.46866 * 299.99849 * 26 14 13 47 47 H 1.08991 * 109.47160 * 60.00156 * 26 14 13 48 48 H 1.08003 * 120.03174 * 359.95896 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7105 -1.2304 5 6 2.7258 -0.0380 -2.1402 6 6 3.1880 -0.6869 -3.2706 7 6 2.8607 -2.0106 -3.4907 8 6 2.0588 -2.6862 -2.5818 9 8 1.7312 -3.9871 -2.7989 10 6 2.2423 -4.5954 -3.9865 11 6 1.7790 -6.0277 -4.0567 12 8 1.0803 -6.4829 -3.1760 13 7 2.1411 -6.8029 -5.0981 14 6 1.6912 -8.1955 -5.1660 15 1 0.6874 -8.2738 -4.7483 16 6 1.6738 -8.6552 -6.6252 17 6 1.2033 -10.1094 -6.6962 18 6 2.1594 -10.9944 -5.8940 19 1 3.1633 -10.9165 -6.3115 20 6 1.6957 -12.4267 -5.9634 21 7 2.1074 -13.3330 -6.8077 22 7 1.4963 -14.4421 -6.5842 23 6 0.6667 -14.2938 -5.5876 24 7 0.7699 -13.0106 -5.1648 25 6 2.1769 -10.5347 -4.4348 26 6 2.6477 -9.0802 -4.3639 27 6 1.5974 -2.0332 -1.4484 28 1 -0.3932 0.4417 -0.7651 29 1 1.7923 -0.5138 0.8900 30 1 1.5879 2.4585 -1.2243 31 1 1.5614 2.4679 1.2084 32 1 2.9859 0.9961 -1.9679 33 1 3.8088 -0.1595 -3.9796 34 1 3.2257 -2.5184 -4.3713 35 1 3.3318 -4.5668 -3.9696 36 1 1.8781 -4.0524 -4.8586 37 1 2.7002 -6.4390 -5.8023 38 1 2.6775 -8.5770 -7.0428 39 1 0.9923 -8.0250 -7.1966 40 1 1.1913 -10.4371 -7.7357 41 1 0.1995 -10.1873 -6.2786 42 1 0.0188 -15.0533 -5.1756 43 1 0.2802 -12.5944 -4.4383 44 1 1.1730 -10.6126 -4.0173 45 1 2.8576 -11.1655 -3.8632 46 1 3.6515 -9.0019 -4.7816 47 1 2.6601 -8.7527 -3.3244 48 1 0.9770 -2.5583 -0.7372 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16624780_4860298.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:36:49 Heat of formation + Delta-G solvation = -2.614088 kcal Electronic energy + Delta-G solvation = -30646.502992 eV Core-core repulsion = 26283.483622 eV Total energy + Delta-G solvation = -4363.019370 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 359.168 amu Computer time = 1.18 seconds Orbital eigenvalues (eV) -44.13667 -41.67080 -40.96957 -39.61671 -38.81919 -37.33342 -35.83369 -34.60233 -32.75129 -32.51951 -32.12153 -31.66413 -30.18195 -28.70269 -26.84184 -24.82234 -24.24863 -23.73221 -23.43850 -22.64060 -22.10898 -21.63309 -21.05971 -19.41475 -19.37967 -18.61739 -17.93808 -17.53346 -17.36497 -17.15158 -16.91901 -16.80012 -16.40333 -16.26592 -16.13687 -15.71963 -15.50418 -15.26591 -15.12504 -14.96033 -14.75919 -14.27095 -14.15088 -13.99619 -13.92064 -13.55802 -13.46823 -13.03141 -12.87826 -12.61527 -12.57082 -12.48174 -12.36368 -12.22443 -12.03510 -11.89424 -11.82616 -11.65110 -11.62602 -11.32505 -10.95380 -10.67984 -10.29576 -10.19248 -9.98322 -9.32608 -4.97565 0.14293 0.34810 0.80111 1.21764 1.37414 1.39282 1.58484 1.75921 1.91391 1.94704 2.44951 2.60889 3.04618 3.27508 3.35373 3.40701 3.44435 3.57810 3.63342 3.68678 3.77991 3.80255 3.82166 3.90209 3.95748 3.97149 4.08849 4.12469 4.13945 4.16106 4.31288 4.32185 4.41833 4.46542 4.50004 4.56986 4.59028 4.75983 4.79291 4.84386 4.85306 4.91538 5.01695 5.06865 5.10707 5.17459 5.25300 5.29649 5.38370 5.58847 6.02375 6.15603 6.30395 6.38604 6.99272 7.74807 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.528 6.528 2 C -0.077 4.077 3 Si 0.690 3.310 4 C -0.078 4.078 5 C -0.153 4.153 6 C -0.073 4.073 7 C -0.206 4.206 8 C 0.128 3.872 9 O -0.288 6.288 10 C 0.040 3.960 11 C 0.517 3.483 12 O -0.511 6.511 13 N -0.725 5.725 14 C 0.145 3.855 15 H 0.091 0.909 16 C -0.125 4.125 17 C -0.107 4.107 18 C -0.003 4.003 19 H 0.111 0.889 20 C 0.185 3.815 21 N -0.290 5.290 22 N -0.296 5.296 23 C 0.155 3.845 24 N -0.581 5.581 25 C -0.115 4.115 26 C -0.128 4.128 27 C -0.121 4.121 28 H 0.376 0.624 29 H 0.121 0.879 30 H -0.260 1.260 31 H -0.257 1.257 32 H 0.130 0.870 33 H 0.132 0.868 34 H 0.130 0.870 35 H 0.095 0.905 36 H 0.094 0.906 37 H 0.403 0.597 38 H 0.077 0.923 39 H 0.077 0.923 40 H 0.081 0.919 41 H 0.067 0.933 42 H 0.223 0.777 43 H 0.429 0.571 44 H 0.065 0.935 45 H 0.075 0.925 46 H 0.073 0.927 47 H 0.075 0.925 48 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.805 3.792 -1.664 5.002 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.334 6.334 2 C -0.187 4.187 3 Si 0.591 3.409 4 C -0.079 4.079 5 C -0.171 4.171 6 C -0.091 4.091 7 C -0.224 4.224 8 C 0.083 3.917 9 O -0.201 6.201 10 C -0.039 4.039 11 C 0.302 3.698 12 O -0.385 6.385 13 N -0.378 5.378 14 C 0.041 3.959 15 H 0.109 0.891 16 C -0.163 4.163 17 C -0.146 4.146 18 C -0.024 4.024 19 H 0.129 0.871 20 C -0.084 4.084 21 N -0.131 5.131 22 N -0.135 5.135 23 C -0.135 4.135 24 N -0.194 5.194 25 C -0.154 4.154 26 C -0.167 4.167 27 C -0.139 4.139 28 H 0.224 0.776 29 H 0.139 0.861 30 H -0.185 1.185 31 H -0.182 1.182 32 H 0.147 0.853 33 H 0.149 0.851 34 H 0.148 0.852 35 H 0.113 0.887 36 H 0.112 0.888 37 H 0.237 0.763 38 H 0.095 0.905 39 H 0.096 0.904 40 H 0.099 0.901 41 H 0.086 0.914 42 H 0.239 0.761 43 H 0.269 0.731 44 H 0.084 0.916 45 H 0.094 0.906 46 H 0.091 0.909 47 H 0.094 0.906 48 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 2.877 3.097 -1.597 4.519 hybrid contribution -1.681 0.610 0.333 1.819 sum 1.196 3.706 -1.265 4.095 Atomic orbital electron populations 1.86619 1.17493 1.79978 1.49285 1.25107 0.84141 1.11146 0.98307 0.94928 0.91660 0.74092 0.80253 1.20103 0.97458 0.93720 0.96575 1.20951 1.00646 1.00104 0.95378 1.20911 0.97857 0.93598 0.96704 1.21301 1.03505 0.96619 1.01021 1.19038 0.94875 0.83002 0.94775 1.86169 1.70419 1.22602 1.40896 1.22466 1.00304 0.92226 0.88890 1.20044 0.80627 0.86940 0.82226 1.90787 1.35964 1.74295 1.37430 1.45875 1.54534 1.12384 1.25015 1.21064 0.99305 0.79360 0.96137 0.89054 1.21807 1.03131 0.96307 0.95081 1.21532 0.98498 0.93291 1.01276 1.19782 1.01361 0.83938 0.97307 0.87141 1.24852 0.92975 0.98446 0.92142 1.74302 1.21690 0.96092 1.21022 1.74303 1.07686 1.17622 1.13920 1.26591 1.02957 0.86632 0.97274 1.44139 1.33741 1.11577 1.29912 1.21611 1.02303 0.96724 0.94744 1.21913 0.99532 0.93613 1.01634 1.20266 1.02821 0.93917 0.96931 0.77599 0.86122 1.18471 1.18175 0.85279 0.85057 0.85232 0.88683 0.88773 0.76252 0.90455 0.90390 0.90051 0.91423 0.76096 0.73107 0.91644 0.90616 0.90866 0.90591 0.84618 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.84 12.77 -35.23 -0.45 -1.29 16 2 C -0.08 0.00 2.82 36.01 0.10 0.11 16 3 Si 0.69 -0.80 29.79 -169.99 -5.06 -5.86 16 4 C -0.08 -0.03 5.39 -104.65 -0.56 -0.59 16 5 C -0.15 0.13 8.67 -39.56 -0.34 -0.22 16 6 C -0.07 0.10 10.04 -39.60 -0.40 -0.30 16 7 C -0.21 0.19 9.04 -39.43 -0.36 -0.17 16 8 C 0.13 0.18 6.69 -39.22 -0.26 -0.08 16 9 O -0.29 -0.67 9.67 -39.35 -0.38 -1.05 16 10 C 0.04 -0.07 5.22 36.00 0.19 0.12 16 11 C 0.52 0.05 7.87 -10.99 -0.09 -0.04 16 12 O -0.51 -2.57 16.16 -14.36 -0.23 -2.80 16 13 N -0.72 2.38 5.08 -53.81 -0.27 2.10 16 14 C 0.15 -0.42 2.45 -67.93 -0.17 -0.58 16 15 H 0.09 -0.08 7.58 -51.93 -0.39 -0.47 16 16 C -0.13 0.55 5.39 -26.73 -0.14 0.40 16 17 C -0.11 0.34 5.19 -26.73 -0.14 0.20 16 18 C 0.00 0.01 2.66 -91.77 -0.24 -0.24 16 19 H 0.11 -0.25 8.14 -51.93 -0.42 -0.67 16 20 C 0.19 0.08 6.99 -154.98 -1.08 -1.00 16 21 N -0.29 -1.31 12.21 32.80 0.40 -0.91 16 22 N -0.30 -1.34 12.21 29.69 0.36 -0.97 16 23 C 0.15 -0.03 13.19 -89.95 -1.19 -1.21 16 24 N -0.58 1.05 5.96 -11.36 -0.07 0.98 16 25 C -0.11 0.37 4.97 -26.70 -0.13 0.24 16 26 C -0.13 0.36 5.50 -26.70 -0.15 0.21 16 27 C -0.12 -0.22 9.55 -39.44 -0.38 -0.60 16 28 H 0.38 -0.49 8.70 45.56 0.40 -0.10 16 29 H 0.12 -0.08 7.96 -51.93 -0.41 -0.50 16 30 H -0.26 -0.18 7.11 56.52 0.40 0.22 16 31 H -0.26 -0.57 7.11 56.52 0.40 -0.17 16 32 H 0.13 -0.34 4.87 -52.48 -0.26 -0.59 16 33 H 0.13 -0.48 8.06 -52.49 -0.42 -0.90 16 34 H 0.13 -0.47 6.30 -52.48 -0.33 -0.80 16 35 H 0.10 -0.41 7.65 -51.93 -0.40 -0.81 16 36 H 0.09 -0.40 7.67 -51.93 -0.40 -0.80 16 37 H 0.40 -2.57 8.60 -40.82 -0.35 -2.92 16 38 H 0.08 -0.40 8.14 -51.93 -0.42 -0.83 16 39 H 0.08 -0.34 8.14 -51.93 -0.42 -0.77 16 40 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 41 H 0.07 -0.21 8.14 -51.93 -0.42 -0.64 16 42 H 0.22 -0.99 8.06 -52.49 -0.42 -1.41 16 43 H 0.43 -2.18 8.28 -40.82 -0.34 -2.51 16 44 H 0.06 -0.25 7.51 -51.93 -0.39 -0.64 16 45 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 46 H 0.07 -0.25 8.14 -51.93 -0.42 -0.68 16 47 H 0.08 -0.05 8.14 -51.93 -0.42 -0.48 16 48 H 0.14 0.35 8.06 -52.48 -0.42 -0.07 16 LS Contribution 394.12 15.07 5.94 5.94 Total: 0.00 -13.56 394.12 -11.82 -25.38 By element: Atomic # 1 Polarization: -11.03 SS G_CDS: -6.72 Total: -17.75 kcal Atomic # 6 Polarization: 1.57 SS G_CDS: -5.34 Total: -3.77 kcal Atomic # 7 Polarization: 0.77 SS G_CDS: 0.42 Total: 1.20 kcal Atomic # 8 Polarization: -4.07 SS G_CDS: -1.06 Total: -5.14 kcal Atomic # 14 Polarization: -0.80 SS G_CDS: -5.06 Total: -5.86 kcal Total LS contribution 5.94 Total: 5.94 kcal Total: -13.56 -11.82 -25.38 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16624780_4860298.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 22.769 kcal (2) G-P(sol) polarization free energy of solvation -13.560 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 9.209 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.823 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.383 kcal (6) G-S(sol) free energy of system = (1) + (5) -2.614 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.18 seconds