Wall clock time and date at job start Sun Mar 7 2021 05:37:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46505 * 1 3 3 C 1.37646 * 125.67276 * 2 1 4 4 C 1.46672 * 126.22703 * 359.97438 * 3 2 1 5 5 O 1.21699 * 120.00002 * 5.13840 * 4 3 2 6 6 N 1.34772 * 119.99999 * 185.13078 * 4 3 2 7 7 C 1.46500 * 120.00014 * 174.63161 * 6 4 3 8 8 H 1.09002 * 109.47073 * 325.00126 * 7 6 4 9 9 C 1.52998 * 109.47016 * 85.00487 * 7 6 4 10 10 C 1.52999 * 109.46863 * 180.02562 * 9 7 6 11 11 C 1.52996 * 109.47097 * 299.99837 * 10 9 7 12 12 H 1.09002 * 109.46988 * 299.99947 * 11 10 9 13 13 C 1.50705 * 109.47132 * 180.02562 * 11 10 9 14 14 N 1.30518 * 126.34625 * 144.69057 * 13 11 10 15 15 N 1.28606 * 109.66995 * 179.82453 * 14 13 11 16 16 C 1.30520 * 109.66908 * 0.44275 * 15 14 13 17 17 N 1.35495 * 107.31181 * 359.73522 * 16 15 14 18 18 C 1.52998 * 109.47131 * 60.00327 * 11 10 9 19 19 C 1.52999 * 109.47043 * 299.99467 * 18 11 10 20 20 C 1.37885 * 107.54460 * 180.25671 * 3 2 1 21 21 C 1.39884 * 107.09413 * 359.58564 * 20 3 2 22 22 Br 1.89095 * 126.07261 * 180.15978 * 21 20 3 23 23 C 1.35498 * 107.85192 * 0.41302 * 21 20 3 24 24 C 1.50697 * 125.57442 * 179.76307 * 23 21 20 25 25 O 1.42899 * 109.47593 * 209.98032 * 24 23 21 26 26 Si 1.86299 * 109.46873 * 329.97951 * 24 23 21 27 27 H 1.08997 * 109.46585 * 91.49353 * 1 2 3 28 28 H 1.08996 * 109.46998 * 211.48909 * 1 2 3 29 29 H 1.09001 * 109.47442 * 331.49625 * 1 2 3 30 30 H 0.97005 * 119.99866 * 354.64231 * 6 4 3 31 31 H 1.08996 * 109.46849 * 299.99935 * 9 7 6 32 32 H 1.08994 * 109.47197 * 59.99928 * 9 7 6 33 33 H 1.08998 * 109.46749 * 179.97438 * 10 9 7 34 34 H 1.08994 * 109.47282 * 59.99968 * 10 9 7 35 35 H 1.08003 * 126.34030 * 179.72948 * 16 15 14 36 36 H 0.97000 * 126.98072 * 180.02562 * 17 16 15 37 37 H 1.09005 * 109.46923 * 180.02562 * 18 11 10 38 38 H 1.08994 * 109.47197 * 59.99899 * 18 11 10 39 39 H 1.08994 * 109.47477 * 300.00261 * 19 18 11 40 40 H 1.08998 * 109.46929 * 180.02562 * 19 18 11 41 41 H 1.08001 * 126.45248 * 179.73502 * 20 3 2 42 42 H 1.09003 * 109.47247 * 89.97683 * 24 23 21 43 43 H 0.96693 * 114.00175 * 59.99406 * 25 24 23 44 44 H 1.48498 * 110.00049 * 179.97438 * 26 24 23 45 45 H 1.48500 * 109.99925 * 301.31640 * 26 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2677 1.1182 0.0000 4 6 1.8121 2.5123 -0.0005 5 8 0.6252 2.7646 0.0934 6 7 2.7077 3.5140 -0.1048 7 6 2.2466 4.8994 -0.2238 8 1 1.3246 4.9269 -0.8046 9 6 1.9882 5.4725 1.1710 10 6 1.5061 6.9192 1.0467 11 6 2.5768 7.7548 0.3423 12 1 3.4990 7.7278 0.9229 13 6 2.1022 9.1800 0.2204 14 7 2.8430 10.2515 0.3009 15 7 2.1100 11.2971 0.1473 16 6 0.8669 10.9401 -0.0287 17 7 0.8264 9.5864 0.0127 18 6 2.8352 7.1817 -1.0525 19 6 3.3174 5.7351 -0.9282 20 6 3.5781 0.6892 -0.0059 21 6 3.5529 -0.7094 0.0002 22 35 5.0610 -1.8502 0.0005 23 6 2.2559 -1.1015 0.0002 24 6 1.7714 -2.5285 0.0008 25 8 0.5133 -2.6047 -0.6725 26 14 3.0120 -3.6058 -0.8774 27 1 -0.3632 -0.0268 -1.0273 28 1 -0.3633 -0.8763 0.5368 29 1 -0.3634 0.9031 0.4904 30 1 3.6576 3.3175 -0.1013 31 1 1.2251 4.8774 1.6726 32 1 2.9102 5.4450 1.7516 33 1 1.3216 7.3273 2.0404 34 1 0.5840 6.9463 0.4662 35 1 0.0264 11.6014 -0.1793 36 1 0.0433 9.0228 -0.0866 37 1 3.5984 7.7769 -1.5541 38 1 1.9131 7.2088 -1.6330 39 1 4.2396 5.7080 -0.3477 40 1 3.5020 5.3270 -1.9219 41 1 4.4583 1.3151 -0.0115 42 1 1.6548 -2.8722 1.0286 43 1 0.5422 -2.3135 -1.5941 44 1 2.5461 -5.0158 -0.8832 45 1 3.2036 -3.1280 -2.2703 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16624780_5000100.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:37:01 Heat of formation + Delta-G solvation = 48.435874 kcal Electronic energy + Delta-G solvation = -30403.645347 eV Core-core repulsion = 26084.504088 eV Total energy + Delta-G solvation = -4319.141259 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 410.074 amu Computer time = 1.28 seconds Orbital eigenvalues (eV) -44.14253 -42.90515 -40.87394 -39.18416 -37.98215 -35.89745 -34.69982 -34.47395 -32.94586 -32.03601 -31.86219 -31.15478 -29.60865 -27.38706 -26.95815 -24.71092 -24.08738 -23.40843 -23.02586 -22.12506 -21.41176 -21.14842 -20.46343 -19.30118 -19.00509 -18.35092 -17.40203 -17.22549 -16.86888 -16.62267 -16.36854 -16.10851 -15.95010 -15.58990 -15.45477 -15.19257 -15.06542 -14.86866 -14.57035 -14.54219 -14.11371 -14.07780 -13.74319 -13.66600 -13.27269 -13.17627 -12.82621 -12.79734 -12.53382 -12.40841 -12.28293 -12.18267 -12.08808 -11.83425 -11.66527 -11.64151 -11.51227 -11.32227 -11.10083 -10.87699 -10.26436 -10.17910 -9.87219 -9.33748 -4.69491 0.16027 0.35978 0.86255 0.90318 1.21609 1.43810 1.56619 1.85286 1.89618 1.93150 2.15691 2.27031 3.07035 3.17373 3.28758 3.49970 3.62648 3.67413 3.77813 3.86350 3.98530 4.09627 4.13560 4.21903 4.23580 4.32633 4.33544 4.34901 4.41132 4.41495 4.44544 4.50658 4.60830 4.64511 4.71946 4.80355 5.01267 5.02487 5.05561 5.10816 5.17463 5.22972 5.28282 5.30431 5.46825 5.58779 5.77900 6.22788 6.23876 6.42943 7.06817 7.70957 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.067 3.933 2 N -0.391 5.391 3 C -0.057 4.057 4 C 0.592 3.408 5 O -0.574 6.574 6 N -0.699 5.699 7 C 0.151 3.849 8 H 0.076 0.924 9 C -0.122 4.122 10 C -0.107 4.107 11 C 0.002 3.998 12 H 0.109 0.891 13 C 0.192 3.808 14 N -0.343 5.343 15 N -0.354 5.354 16 C 0.168 3.832 17 N -0.569 5.569 18 C -0.101 4.101 19 C -0.117 4.117 20 C -0.092 4.092 21 C -0.191 4.191 22 Br 0.089 6.911 23 C 0.056 3.944 24 C -0.040 4.040 25 O -0.542 6.542 26 Si 0.627 3.373 27 H 0.085 0.915 28 H 0.101 0.899 29 H 0.095 0.905 30 H 0.418 0.582 31 H 0.057 0.943 32 H 0.081 0.919 33 H 0.071 0.929 34 H 0.074 0.926 35 H 0.261 0.739 36 H 0.445 0.555 37 H 0.072 0.928 38 H 0.070 0.930 39 H 0.092 0.908 40 H 0.085 0.915 41 H 0.189 0.811 42 H 0.140 0.860 43 H 0.386 0.614 44 H -0.271 1.271 45 H -0.280 1.280 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.016 -1.596 -0.191 1.608 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 N -0.063 5.063 3 C -0.171 4.171 4 C 0.380 3.620 5 O -0.455 6.455 6 N -0.350 5.350 7 C 0.047 3.953 8 H 0.094 0.906 9 C -0.161 4.161 10 C -0.146 4.146 11 C -0.018 4.018 12 H 0.127 0.873 13 C -0.079 4.079 14 N -0.183 5.183 15 N -0.193 5.193 16 C -0.122 4.122 17 N -0.184 5.184 18 C -0.141 4.141 19 C -0.155 4.155 20 C -0.118 4.118 21 C -0.276 4.276 22 Br 0.172 6.828 23 C -0.067 4.067 24 C -0.150 4.150 25 O -0.349 6.349 26 Si 0.529 3.471 27 H 0.103 0.897 28 H 0.120 0.880 29 H 0.113 0.887 30 H 0.255 0.745 31 H 0.076 0.924 32 H 0.099 0.901 33 H 0.090 0.910 34 H 0.092 0.908 35 H 0.276 0.724 36 H 0.288 0.712 37 H 0.091 0.909 38 H 0.088 0.912 39 H 0.110 0.890 40 H 0.103 0.897 41 H 0.206 0.794 42 H 0.158 0.842 43 H 0.235 0.765 44 H -0.197 1.197 45 H -0.205 1.205 Dipole moment (debyes) X Y Z Total from point charges 0.621 -1.512 -0.072 1.636 hybrid contribution -2.623 -0.359 -0.933 2.807 sum -2.002 -1.871 -1.005 2.919 Atomic orbital electron populations 1.22463 0.74320 1.05746 1.04809 1.43924 1.07710 1.03887 1.50753 1.20225 0.90307 0.87886 1.18656 1.16936 0.85496 0.83667 0.75893 1.90797 1.17633 1.85043 1.52032 1.45602 1.10261 1.05669 1.73483 1.21053 0.98589 0.79067 0.96592 0.90566 1.21824 1.02434 0.94867 0.96953 1.21528 0.97625 0.94332 1.01084 1.19841 1.00433 0.82504 0.99061 0.87293 1.25232 0.81909 0.98938 1.01819 1.74191 1.27955 0.95305 1.20802 1.74197 1.02258 1.22975 1.19882 1.27285 0.99561 0.83537 1.01843 1.44095 1.10918 1.08653 1.54710 1.21471 1.02500 0.95589 0.94494 1.21751 0.98336 0.93294 1.02100 1.21531 0.95710 0.92487 1.02072 1.20698 0.90558 0.95060 1.21332 1.96321 1.32735 1.56362 1.97336 1.21001 0.89707 0.90197 1.05760 1.24677 0.93272 0.92713 1.04367 1.86551 1.29657 1.88858 1.29810 0.92729 0.92482 0.77942 0.83971 0.89682 0.88029 0.88651 0.74451 0.92403 0.90051 0.90984 0.90774 0.72379 0.71166 0.90906 0.91168 0.88983 0.89678 0.79426 0.84249 0.76530 1.19655 1.20491 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 -0.01 9.41 127.77 1.20 1.20 16 2 N -0.39 -0.46 3.16 -519.61 -1.64 -2.11 16 3 C -0.06 0.00 6.89 40.35 0.28 0.28 16 4 C 0.59 0.32 7.73 86.45 0.67 0.98 16 5 O -0.57 -3.98 14.27 -4.35 -0.06 -4.04 16 6 N -0.70 4.41 5.06 -446.50 -2.26 2.15 16 7 C 0.15 -1.03 2.41 44.99 0.11 -0.92 16 8 H 0.08 -0.25 7.66 -2.39 -0.02 -0.26 16 9 C -0.12 0.77 5.49 30.59 0.17 0.94 16 10 C -0.11 0.80 4.97 30.59 0.15 0.95 16 11 C 0.00 -0.01 2.66 -11.54 -0.03 -0.04 16 12 H 0.11 -0.52 8.14 -2.39 -0.02 -0.54 16 13 C 0.19 0.14 6.99 137.98 0.96 1.10 16 14 N -0.34 -3.44 12.21 -50.15 -0.61 -4.05 16 15 N -0.35 -3.47 12.21 -59.99 -0.73 -4.20 16 16 C 0.17 -0.18 13.19 180.11 2.37 2.19 16 17 N -0.57 2.62 5.96 -189.85 -1.13 1.49 16 18 C -0.10 0.75 5.19 30.59 0.16 0.91 16 19 C -0.12 1.18 5.39 30.60 0.17 1.34 16 20 C -0.09 0.34 10.34 22.58 0.23 0.58 16 21 C -0.19 0.27 6.15 22.03 0.14 0.40 16 22 Br 0.09 -0.31 28.25 -20.37 -0.58 -0.89 16 23 C 0.06 0.02 6.15 41.34 0.25 0.27 16 24 C -0.04 0.01 2.89 71.24 0.21 0.21 16 25 O -0.54 -0.33 10.41 -148.98 -1.55 -1.89 16 26 Si 0.63 1.19 27.11 68.60 1.86 3.05 16 27 H 0.08 -0.15 8.14 -2.39 -0.02 -0.17 16 28 H 0.10 -0.10 6.89 -2.39 -0.02 -0.12 16 29 H 0.09 0.25 6.14 -2.39 -0.01 0.24 16 30 H 0.42 -4.92 7.50 -92.70 -0.70 -5.61 16 31 H 0.06 -0.09 8.08 -2.39 -0.02 -0.11 16 32 H 0.08 -0.62 8.14 -2.39 -0.02 -0.64 16 33 H 0.07 -0.45 8.14 -2.39 -0.02 -0.47 16 34 H 0.07 -0.68 7.52 -2.39 -0.02 -0.70 16 35 H 0.26 -2.82 8.06 -2.91 -0.02 -2.84 16 36 H 0.45 -5.30 8.29 -92.71 -0.77 -6.06 16 37 H 0.07 -0.35 8.14 -2.38 -0.02 -0.37 16 38 H 0.07 -0.54 8.14 -2.39 -0.02 -0.56 16 39 H 0.09 -1.13 8.14 -2.39 -0.02 -1.14 16 40 H 0.08 -0.89 8.14 -2.39 -0.02 -0.91 16 41 H 0.19 -2.03 7.45 -2.91 -0.02 -2.06 16 42 H 0.14 -0.32 7.96 -2.39 -0.02 -0.34 16 43 H 0.39 -1.38 8.70 -74.06 -0.64 -2.03 16 44 H -0.27 -2.23 7.11 99.48 0.71 -1.53 16 45 H -0.28 -1.93 7.11 99.48 0.71 -1.22 16 Total: 0.00 -26.88 378.09 -0.67 -27.55 By element: Atomic # 1 Polarization: -26.45 SS G_CDS: -1.00 Total: -27.45 kcal Atomic # 6 Polarization: 3.35 SS G_CDS: 7.04 Total: 10.39 kcal Atomic # 7 Polarization: -0.34 SS G_CDS: -6.38 Total: -6.72 kcal Atomic # 8 Polarization: -4.32 SS G_CDS: -1.61 Total: -5.93 kcal Atomic # 14 Polarization: 1.19 SS G_CDS: 1.86 Total: 3.05 kcal Atomic # 35 Polarization: -0.31 SS G_CDS: -0.58 Total: -0.89 kcal Total: -26.88 -0.67 -27.55 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16624780_5000100.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 75.989 kcal (2) G-P(sol) polarization free energy of solvation -26.882 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 49.107 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.671 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.553 kcal (6) G-S(sol) free energy of system = (1) + (5) 48.436 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.28 seconds