Wall clock time and date at job start Sun Mar 7 2021 05:37:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86304 * 109.47125 * 2 1 4 4 C 1.50698 * 109.47208 * 120.00189 * 2 1 3 5 5 C 1.38246 * 119.94061 * 244.97806 * 4 2 1 6 6 C 1.38192 * 120.07087 * 179.70240 * 5 4 2 7 7 C 1.38682 * 119.95249 * 0.59219 * 6 5 4 8 8 O 1.35918 * 120.05346 * 179.70300 * 7 6 5 9 9 C 1.42894 * 117.00296 * 359.72831 * 8 7 6 10 10 C 1.50696 * 109.47002 * 180.02562 * 9 8 7 11 11 O 1.21287 * 120.00051 * 359.97438 * 10 9 8 12 12 N 1.34783 * 120.00006 * 180.02562 * 10 9 8 13 13 C 1.46506 * 119.99811 * 179.97438 * 12 10 9 14 14 H 1.08993 * 109.47068 * 34.99431 * 13 12 10 15 15 C 1.52999 * 109.46691 * 155.00013 * 13 12 10 16 16 C 1.53006 * 109.46626 * 179.97438 * 15 13 12 17 17 C 1.52997 * 109.47127 * 299.99539 * 16 15 13 18 18 H 1.08996 * 109.46952 * 300.00302 * 17 16 15 19 19 C 1.50696 * 109.47242 * 180.02562 * 17 16 15 20 20 N 1.30523 * 126.34257 * 94.68569 * 19 17 16 21 21 N 1.28606 * 109.67080 * 179.82403 * 20 19 17 22 22 C 1.30520 * 109.66846 * 0.45529 * 21 20 19 23 23 N 1.35488 * 107.31387 * 359.72692 * 22 21 20 24 24 C 1.53002 * 109.46817 * 60.00361 * 17 16 15 25 25 C 1.52996 * 109.46972 * 299.99733 * 24 17 16 26 26 C 1.38833 * 119.87941 * 359.42961 * 7 6 5 27 27 Br 1.89108 * 120.03037 * 180.24967 * 26 7 6 28 28 C 1.38186 * 119.93079 * 0.27800 * 26 7 6 29 29 H 0.96704 * 113.99965 * 299.99842 * 1 2 3 30 30 H 1.08997 * 109.47321 * 240.00119 * 2 1 3 31 31 H 1.48500 * 109.99847 * 178.68216 * 3 2 1 32 32 H 1.48495 * 109.99840 * 300.00184 * 3 2 1 33 33 H 1.08001 * 119.96564 * 359.97438 * 5 4 2 34 34 H 1.08000 * 120.02090 * 180.32615 * 6 5 4 35 35 H 1.08997 * 109.47368 * 59.99762 * 9 8 7 36 36 H 1.09002 * 109.46975 * 300.00098 * 9 8 7 37 37 H 0.97000 * 119.99910 * 359.97438 * 12 10 9 38 38 H 1.08993 * 109.47839 * 59.99891 * 15 13 12 39 39 H 1.09000 * 109.47160 * 299.99453 * 15 13 12 40 40 H 1.09001 * 109.46801 * 59.99811 * 16 15 13 41 41 H 1.09001 * 109.46998 * 179.97438 * 16 15 13 42 42 H 1.08001 * 126.34359 * 179.72142 * 22 21 20 43 43 H 0.96991 * 126.98666 * 180.02562 * 23 22 21 44 44 H 1.08996 * 109.47407 * 60.00219 * 24 17 16 45 45 H 1.09000 * 109.46986 * 179.97438 * 24 17 16 46 46 H 1.09001 * 109.46993 * 180.02562 * 25 24 17 47 47 H 1.09000 * 109.47380 * 299.99696 * 25 24 17 48 48 H 1.08006 * 119.97661 * 179.97438 * 28 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 2.6390 -0.0112 2.1903 6 6 3.0956 -0.6586 3.3226 7 6 2.8541 -2.0139 3.4901 8 8 3.3075 -2.6541 4.6000 9 6 4.0310 -1.8703 5.5510 10 6 4.4512 -2.7431 6.7054 11 8 4.1594 -3.9203 6.7132 12 7 5.1504 -2.2152 7.7296 13 6 5.5584 -3.0637 8.8522 14 1 5.7943 -4.0626 8.4856 15 6 6.7944 -2.4615 9.5235 16 6 7.2201 -3.3472 10.6963 17 6 6.0788 -3.4324 11.7117 18 1 5.8429 -2.4332 12.0778 19 6 6.4983 -4.3042 12.8670 20 7 7.0165 -3.8983 13.9941 21 7 7.2497 -4.9102 14.7527 22 6 6.8998 -6.0084 14.1401 23 7 6.4130 -5.6552 12.9260 24 6 4.8428 -4.0345 11.0402 25 6 4.4171 -3.1488 9.8676 26 6 2.1436 -2.7143 2.5247 27 35 1.8057 -4.5610 2.7521 28 6 1.6840 -2.0607 1.3972 29 1 -0.3933 0.4417 0.7651 30 1 1.7923 -0.5138 -0.8900 31 1 3.5346 1.7703 0.0321 32 1 1.5614 2.4679 -1.2084 33 1 2.8315 1.0432 2.0572 34 1 3.6439 -0.1104 4.0744 35 1 3.3947 -1.0646 5.9169 36 1 4.9156 -1.4471 5.0751 37 1 5.3834 -1.2737 7.7235 38 1 6.5584 -1.4625 9.8901 39 1 7.6073 -2.4004 8.8001 40 1 7.4559 -4.3464 10.3300 41 1 8.1009 -2.9185 11.1743 42 1 6.9831 -7.0125 14.5289 43 1 6.0723 -6.2488 12.2388 44 1 5.0786 -5.0337 10.6741 45 1 4.0298 -4.0956 11.7637 46 1 3.5363 -3.5775 9.3895 47 1 4.1811 -2.1497 10.2337 48 1 1.1315 -2.6050 0.6455 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16624780_6201210.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:37:12 Heat of formation + Delta-G solvation = 3.583493 kcal Electronic energy + Delta-G solvation = -32825.330454 eV Core-core repulsion = 28122.761828 eV Total energy + Delta-G solvation = -4702.568626 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 437.078 amu Computer time = 1.30 seconds Orbital eigenvalues (eV) -44.13845 -41.81326 -41.06581 -39.70437 -38.93543 -37.29994 -35.84434 -34.60690 -33.65364 -32.69113 -32.13053 -32.01058 -30.69124 -30.17424 -28.91997 -26.45380 -24.92151 -24.30782 -23.96221 -23.34672 -22.50898 -22.20340 -21.70465 -21.10659 -19.70611 -19.39684 -18.68987 -18.23686 -17.65885 -17.44436 -17.18631 -16.83782 -16.57139 -16.40702 -16.27731 -15.99835 -15.76423 -15.74909 -15.31713 -15.26445 -14.97679 -14.84731 -14.43962 -14.30168 -14.10872 -13.92662 -13.78738 -13.71728 -13.51396 -12.88937 -12.58514 -12.49584 -12.43177 -12.35681 -12.33995 -12.20896 -11.97030 -11.90139 -11.83488 -11.83074 -11.65350 -11.33169 -11.10091 -10.97594 -10.53167 -10.30699 -10.19679 -10.02484 -9.37948 -5.15882 -0.13792 0.02342 0.67806 0.79774 1.18658 1.24104 1.37079 1.51939 1.75535 1.88353 1.90962 2.29456 2.32190 3.03607 3.23833 3.33476 3.36084 3.41315 3.49849 3.54464 3.61361 3.63173 3.72913 3.74494 3.77592 3.89163 3.96455 3.98092 4.08072 4.11902 4.15471 4.23825 4.31043 4.40029 4.41464 4.46101 4.51250 4.56486 4.72133 4.75308 4.78728 4.83832 4.84658 4.86209 5.00992 5.06110 5.10237 5.12403 5.23383 5.35937 5.91191 6.02063 6.21367 6.48282 6.97400 7.74334 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.538 6.538 2 C -0.064 4.064 3 Si 0.686 3.314 4 C -0.152 4.152 5 C -0.059 4.059 6 C -0.201 4.201 7 C 0.160 3.840 8 O -0.274 6.274 9 C 0.036 3.964 10 C 0.517 3.483 11 O -0.506 6.506 12 N -0.724 5.724 13 C 0.146 3.854 14 H 0.092 0.908 15 C -0.125 4.125 16 C -0.107 4.107 17 C -0.003 4.003 18 H 0.110 0.890 19 C 0.185 3.815 20 N -0.291 5.291 21 N -0.296 5.296 22 C 0.155 3.845 23 N -0.581 5.581 24 C -0.115 4.115 25 C -0.128 4.128 26 C -0.123 4.123 27 Br -0.025 7.025 28 C -0.024 4.024 29 H 0.380 0.620 30 H 0.115 0.885 31 H -0.256 1.256 32 H -0.252 1.252 33 H 0.137 0.863 34 H 0.141 0.859 35 H 0.098 0.902 36 H 0.097 0.903 37 H 0.403 0.597 38 H 0.077 0.923 39 H 0.077 0.923 40 H 0.067 0.933 41 H 0.081 0.919 42 H 0.223 0.777 43 H 0.429 0.571 44 H 0.065 0.935 45 H 0.075 0.925 46 H 0.076 0.924 47 H 0.073 0.927 48 H 0.144 0.856 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.261 4.553 -0.616 4.602 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.175 4.175 3 Si 0.588 3.412 4 C -0.154 4.154 5 C -0.077 4.077 6 C -0.220 4.220 7 C 0.112 3.888 8 O -0.185 6.185 9 C -0.043 4.043 10 C 0.301 3.699 11 O -0.379 6.379 12 N -0.378 5.378 13 C 0.042 3.958 14 H 0.110 0.890 15 C -0.163 4.163 16 C -0.146 4.146 17 C -0.024 4.024 18 H 0.128 0.872 19 C -0.084 4.084 20 N -0.131 5.131 21 N -0.135 5.135 22 C -0.134 4.134 23 N -0.194 5.194 24 C -0.154 4.154 25 C -0.167 4.167 26 C -0.203 4.203 27 Br 0.060 6.940 28 C -0.044 4.044 29 H 0.227 0.773 30 H 0.133 0.867 31 H -0.181 1.181 32 H -0.177 1.177 33 H 0.154 0.846 34 H 0.159 0.841 35 H 0.116 0.884 36 H 0.115 0.885 37 H 0.237 0.763 38 H 0.095 0.905 39 H 0.096 0.904 40 H 0.086 0.914 41 H 0.099 0.901 42 H 0.239 0.761 43 H 0.269 0.731 44 H 0.084 0.916 45 H 0.094 0.906 46 H 0.094 0.906 47 H 0.091 0.909 48 H 0.162 0.838 Dipole moment (debyes) X Y Z Total from point charges 1.077 4.063 -0.231 4.209 hybrid contribution -0.254 -0.899 -1.381 1.668 sum 0.823 3.164 -1.613 3.645 Atomic orbital electron populations 1.86529 1.16927 1.81677 1.49250 1.25016 0.85384 1.09992 0.97069 0.94905 0.80934 0.77743 0.87635 1.20276 1.02471 0.94395 0.98218 1.20918 0.94985 0.99361 0.92434 1.21171 1.06952 0.92825 1.01046 1.18632 0.93063 0.90694 0.86418 1.86284 1.67985 1.36088 1.28174 1.22563 0.97947 0.94187 0.89567 1.19958 0.78575 0.88476 0.82885 1.90808 1.52839 1.16017 1.78257 1.45868 1.57381 1.13659 1.20904 1.21063 0.93826 0.95572 0.85343 0.89030 1.21807 0.97036 0.99935 0.97545 1.21533 0.97681 1.00807 0.94590 1.19778 0.95492 0.98001 0.89106 0.87151 1.24852 1.02616 0.82176 0.98775 1.74307 1.15746 1.22710 1.00350 1.74313 1.19228 0.95144 1.24845 1.26590 1.00667 1.02313 0.83876 1.44136 1.49375 1.08671 1.17183 1.21599 0.96918 0.99292 0.97570 1.21902 0.98748 1.00817 0.95211 1.21157 1.07902 0.93128 0.98095 1.96812 1.94724 1.04826 1.97605 1.20888 0.95194 0.93612 0.94669 0.77302 0.86718 1.18128 1.17720 0.84592 0.84097 0.88375 0.88501 0.76272 0.90461 0.90391 0.91430 0.90061 0.76101 0.73108 0.91644 0.90623 0.90567 0.90878 0.83847 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.37 12.83 -35.23 -0.45 -0.08 16 2 C -0.06 0.09 2.80 36.00 0.10 0.19 16 3 Si 0.69 -1.65 29.80 -169.99 -5.07 -6.72 16 4 C -0.15 0.15 5.35 -104.60 -0.56 -0.41 16 5 C -0.06 0.14 8.66 -39.60 -0.34 -0.20 16 6 C -0.20 0.43 9.04 -39.43 -0.36 0.07 16 7 C 0.16 0.11 6.68 -39.20 -0.26 -0.15 16 8 O -0.27 -0.40 9.01 -39.39 -0.35 -0.75 16 9 C 0.04 -0.10 5.22 36.00 0.19 0.09 16 10 C 0.52 -0.32 7.87 -10.98 -0.09 -0.41 16 11 O -0.51 -2.22 16.16 -14.36 -0.23 -2.45 16 12 N -0.72 2.80 5.08 -53.81 -0.27 2.53 16 13 C 0.15 -0.48 2.46 -67.93 -0.17 -0.65 16 14 H 0.09 -0.11 7.58 -51.93 -0.39 -0.51 16 15 C -0.13 0.59 5.39 -26.73 -0.14 0.44 16 16 C -0.11 0.37 5.19 -26.73 -0.14 0.23 16 17 C 0.00 0.01 2.66 -91.77 -0.24 -0.24 16 18 H 0.11 -0.27 8.14 -51.93 -0.42 -0.69 16 19 C 0.19 0.05 6.99 -154.98 -1.08 -1.03 16 20 N -0.29 -1.27 12.21 32.80 0.40 -0.87 16 21 N -0.30 -1.30 12.21 29.69 0.36 -0.94 16 22 C 0.15 -0.05 13.19 -89.95 -1.19 -1.23 16 23 N -0.58 1.12 5.96 -11.36 -0.07 1.05 16 24 C -0.11 0.40 4.97 -26.73 -0.13 0.26 16 25 C -0.13 0.40 5.49 -26.73 -0.15 0.25 16 26 C -0.12 -0.22 6.24 -39.38 -0.25 -0.47 16 27 Br -0.03 -0.08 33.16 -68.01 -2.26 -2.34 16 28 C -0.02 -0.01 9.42 -39.58 -0.37 -0.39 16 29 H 0.38 -1.74 8.70 45.56 0.40 -1.35 16 30 H 0.12 -0.10 7.96 -51.93 -0.41 -0.51 16 31 H -0.26 0.06 7.11 56.52 0.40 0.46 16 32 H -0.25 -0.29 7.11 56.52 0.40 0.11 16 33 H 0.14 -0.65 4.90 -52.49 -0.26 -0.91 16 34 H 0.14 -0.75 6.30 -52.49 -0.33 -1.08 16 35 H 0.10 -0.55 7.65 -51.93 -0.40 -0.95 16 36 H 0.10 -0.52 7.67 -51.93 -0.40 -0.92 16 37 H 0.40 -2.82 8.60 -40.82 -0.35 -3.17 16 38 H 0.08 -0.43 8.14 -51.93 -0.42 -0.85 16 39 H 0.08 -0.37 8.14 -51.93 -0.42 -0.79 16 40 H 0.07 -0.23 8.14 -51.93 -0.42 -0.65 16 41 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 42 H 0.22 -1.01 8.06 -52.49 -0.42 -1.43 16 43 H 0.43 -2.23 8.29 -40.82 -0.34 -2.57 16 44 H 0.06 -0.26 7.52 -51.93 -0.39 -0.65 16 45 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 46 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 47 H 0.07 -0.28 8.14 -51.93 -0.42 -0.70 16 48 H 0.14 0.04 8.06 -52.48 -0.42 -0.38 16 LS Contribution 414.66 15.07 6.25 6.25 Total: 0.00 -14.09 414.66 -13.17 -27.26 By element: Atomic # 1 Polarization: -13.00 SS G_CDS: -6.30 Total: -19.30 kcal Atomic # 6 Polarization: 1.54 SS G_CDS: -5.18 Total: -3.64 kcal Atomic # 7 Polarization: 1.35 SS G_CDS: 0.42 Total: 1.77 kcal Atomic # 8 Polarization: -2.24 SS G_CDS: -1.04 Total: -3.28 kcal Atomic # 14 Polarization: -1.65 SS G_CDS: -5.07 Total: -6.72 kcal Atomic # 35 Polarization: -0.08 SS G_CDS: -2.26 Total: -2.34 kcal Total LS contribution 6.25 Total: 6.25 kcal Total: -14.09 -13.17 -27.26 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16624780_6201210.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 30.845 kcal (2) G-P(sol) polarization free energy of solvation -14.095 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 16.750 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.167 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.261 kcal (6) G-S(sol) free energy of system = (1) + (5) 3.583 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.30 seconds