Wall clock time and date at job start Sun Mar 7 2021 05:37:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86304 * 109.47125 * 2 1 4 4 C 1.50698 * 109.47208 * 120.00189 * 2 1 3 5 5 C 1.38246 * 119.94061 * 244.97806 * 4 2 1 6 6 C 1.38192 * 120.07087 * 179.70240 * 5 4 2 7 7 C 1.38682 * 119.95249 * 0.59219 * 6 5 4 8 8 O 1.35918 * 120.05346 * 179.70300 * 7 6 5 9 9 C 1.42894 * 117.00296 * 359.72831 * 8 7 6 10 10 C 1.50696 * 109.47002 * 180.02562 * 9 8 7 11 11 O 1.21287 * 120.00051 * 359.97438 * 10 9 8 12 12 N 1.34783 * 120.00006 * 180.02562 * 10 9 8 13 13 C 1.46506 * 119.99811 * 179.97438 * 12 10 9 14 14 H 1.08993 * 109.47068 * 34.99431 * 13 12 10 15 15 C 1.52999 * 109.46691 * 155.00013 * 13 12 10 16 16 C 1.53006 * 109.46626 * 179.97438 * 15 13 12 17 17 C 1.52997 * 109.47127 * 299.99539 * 16 15 13 18 18 H 1.08996 * 109.46952 * 300.00302 * 17 16 15 19 19 C 1.50696 * 109.47242 * 180.02562 * 17 16 15 20 20 N 1.30523 * 126.34257 * 94.68569 * 19 17 16 21 21 N 1.28606 * 109.67080 * 179.82403 * 20 19 17 22 22 C 1.30520 * 109.66846 * 0.45529 * 21 20 19 23 23 N 1.35488 * 107.31387 * 359.72692 * 22 21 20 24 24 C 1.53002 * 109.46817 * 60.00361 * 17 16 15 25 25 C 1.52996 * 109.46972 * 299.99733 * 24 17 16 26 26 C 1.38833 * 119.87941 * 359.42961 * 7 6 5 27 27 Br 1.89108 * 120.03037 * 180.24967 * 26 7 6 28 28 C 1.38186 * 119.93079 * 0.27800 * 26 7 6 29 29 H 0.96704 * 113.99965 * 299.99842 * 1 2 3 30 30 H 1.08997 * 109.47321 * 240.00119 * 2 1 3 31 31 H 1.48500 * 109.99847 * 178.68216 * 3 2 1 32 32 H 1.48495 * 109.99840 * 300.00184 * 3 2 1 33 33 H 1.08001 * 119.96564 * 359.97438 * 5 4 2 34 34 H 1.08000 * 120.02090 * 180.32615 * 6 5 4 35 35 H 1.08997 * 109.47368 * 59.99762 * 9 8 7 36 36 H 1.09002 * 109.46975 * 300.00098 * 9 8 7 37 37 H 0.97000 * 119.99910 * 359.97438 * 12 10 9 38 38 H 1.08993 * 109.47839 * 59.99891 * 15 13 12 39 39 H 1.09000 * 109.47160 * 299.99453 * 15 13 12 40 40 H 1.09001 * 109.46801 * 59.99811 * 16 15 13 41 41 H 1.09001 * 109.46998 * 179.97438 * 16 15 13 42 42 H 1.08001 * 126.34359 * 179.72142 * 22 21 20 43 43 H 0.96991 * 126.98666 * 180.02562 * 23 22 21 44 44 H 1.08996 * 109.47407 * 60.00219 * 24 17 16 45 45 H 1.09000 * 109.46986 * 179.97438 * 24 17 16 46 46 H 1.09001 * 109.46993 * 180.02562 * 25 24 17 47 47 H 1.09000 * 109.47380 * 299.99696 * 25 24 17 48 48 H 1.08006 * 119.97661 * 179.97438 * 28 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 2.6390 -0.0112 2.1903 6 6 3.0956 -0.6586 3.3226 7 6 2.8541 -2.0139 3.4901 8 8 3.3075 -2.6541 4.6000 9 6 4.0310 -1.8703 5.5510 10 6 4.4512 -2.7431 6.7054 11 8 4.1594 -3.9203 6.7132 12 7 5.1504 -2.2152 7.7296 13 6 5.5584 -3.0637 8.8522 14 1 5.7943 -4.0626 8.4856 15 6 6.7944 -2.4615 9.5235 16 6 7.2201 -3.3472 10.6963 17 6 6.0788 -3.4324 11.7117 18 1 5.8429 -2.4332 12.0778 19 6 6.4983 -4.3042 12.8670 20 7 7.0165 -3.8983 13.9941 21 7 7.2497 -4.9102 14.7527 22 6 6.8998 -6.0084 14.1401 23 7 6.4130 -5.6552 12.9260 24 6 4.8428 -4.0345 11.0402 25 6 4.4171 -3.1488 9.8676 26 6 2.1436 -2.7143 2.5247 27 35 1.8057 -4.5610 2.7521 28 6 1.6840 -2.0607 1.3972 29 1 -0.3933 0.4417 0.7651 30 1 1.7923 -0.5138 -0.8900 31 1 3.5346 1.7703 0.0321 32 1 1.5614 2.4679 -1.2084 33 1 2.8315 1.0432 2.0572 34 1 3.6439 -0.1104 4.0744 35 1 3.3947 -1.0646 5.9169 36 1 4.9156 -1.4471 5.0751 37 1 5.3834 -1.2737 7.7235 38 1 6.5584 -1.4625 9.8901 39 1 7.6073 -2.4004 8.8001 40 1 7.4559 -4.3464 10.3300 41 1 8.1009 -2.9185 11.1743 42 1 6.9831 -7.0125 14.5289 43 1 6.0723 -6.2488 12.2388 44 1 5.0786 -5.0337 10.6741 45 1 4.0298 -4.0956 11.7637 46 1 3.5363 -3.5775 9.3895 47 1 4.1811 -2.1497 10.2337 48 1 1.1315 -2.6050 0.6455 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16624780_6201210.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:37:11 Heat of formation + Delta-G solvation = 0.345813 kcal Electronic energy + Delta-G solvation = -32825.470851 eV Core-core repulsion = 28122.761828 eV Total energy + Delta-G solvation = -4702.709022 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 437.078 amu Computer time = 1.46 seconds Orbital eigenvalues (eV) -44.14947 -41.69499 -40.92881 -39.55596 -38.84193 -37.20318 -35.74498 -34.58774 -33.61199 -32.60780 -31.89557 -31.86875 -30.64092 -30.14250 -28.75423 -26.33847 -24.79951 -24.15450 -23.80391 -23.25859 -22.42526 -22.11745 -21.54762 -20.89578 -19.56228 -19.30727 -18.54758 -18.10156 -17.47440 -17.28583 -17.07868 -16.84100 -16.47525 -16.34303 -16.13154 -15.85222 -15.62863 -15.62568 -15.15367 -15.09929 -14.81784 -14.69603 -14.42730 -14.10799 -13.93298 -13.80769 -13.68159 -13.59132 -13.27797 -12.84057 -12.42057 -12.36589 -12.26941 -12.19174 -12.16120 -12.12141 -11.90163 -11.84210 -11.83701 -11.66443 -11.51225 -11.29728 -11.23245 -10.91645 -10.42177 -10.25726 -10.11584 -9.97056 -9.31522 -4.97821 -0.04846 0.12435 0.64221 0.85432 1.34120 1.44159 1.50318 1.67214 1.84253 1.89577 2.02659 2.40302 2.52589 3.16798 3.47589 3.49881 3.57971 3.66180 3.68029 3.77207 3.85046 3.86818 3.98094 4.05809 4.09534 4.13060 4.15519 4.21735 4.32642 4.33729 4.33973 4.40629 4.44007 4.50304 4.51618 4.64578 4.66839 4.80551 4.85367 5.00863 5.01512 5.01661 5.04931 5.09512 5.16991 5.24287 5.27029 5.30516 5.46094 5.50766 6.08245 6.22458 6.50792 6.79773 7.19157 7.69961 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.558 6.558 2 C -0.076 4.076 3 Si 0.788 3.212 4 C -0.154 4.154 5 C -0.053 4.053 6 C -0.189 4.189 7 C 0.149 3.851 8 O -0.305 6.305 9 C 0.030 3.970 10 C 0.513 3.487 11 O -0.567 6.567 12 N -0.706 5.706 13 C 0.147 3.853 14 H 0.069 0.931 15 C -0.114 4.114 16 C -0.103 4.103 17 C 0.004 3.996 18 H 0.111 0.889 19 C 0.191 3.809 20 N -0.341 5.341 21 N -0.354 5.354 22 C 0.168 3.832 23 N -0.570 5.570 24 C -0.109 4.109 25 C -0.122 4.122 26 C -0.145 4.145 27 Br -0.056 7.056 28 C -0.037 4.037 29 H 0.396 0.604 30 H 0.103 0.897 31 H -0.276 1.276 32 H -0.305 1.305 33 H 0.168 0.832 34 H 0.182 0.818 35 H 0.133 0.867 36 H 0.130 0.870 37 H 0.422 0.578 38 H 0.094 0.906 39 H 0.084 0.916 40 H 0.066 0.934 41 H 0.073 0.927 42 H 0.260 0.740 43 H 0.445 0.555 44 H 0.070 0.930 45 H 0.071 0.929 46 H 0.054 0.946 47 H 0.085 0.915 48 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.952 6.862 -0.470 6.944 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.366 6.366 2 C -0.185 4.185 3 Si 0.693 3.307 4 C -0.155 4.155 5 C -0.070 4.070 6 C -0.207 4.207 7 C 0.101 3.899 8 O -0.218 6.218 9 C -0.047 4.047 10 C 0.299 3.701 11 O -0.445 6.445 12 N -0.360 5.360 13 C 0.043 3.957 14 H 0.087 0.913 15 C -0.152 4.152 16 C -0.142 4.142 17 C -0.017 4.017 18 H 0.129 0.871 19 C -0.080 4.080 20 N -0.181 5.181 21 N -0.193 5.193 22 C -0.122 4.122 23 N -0.184 5.184 24 C -0.147 4.147 25 C -0.161 4.161 26 C -0.225 4.225 27 Br 0.030 6.970 28 C -0.057 4.057 29 H 0.246 0.754 30 H 0.121 0.879 31 H -0.203 1.203 32 H -0.233 1.233 33 H 0.185 0.815 34 H 0.199 0.801 35 H 0.151 0.849 36 H 0.147 0.853 37 H 0.260 0.740 38 H 0.113 0.887 39 H 0.103 0.897 40 H 0.085 0.915 41 H 0.091 0.909 42 H 0.276 0.724 43 H 0.288 0.712 44 H 0.088 0.912 45 H 0.090 0.910 46 H 0.072 0.928 47 H 0.104 0.896 48 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges 1.771 6.395 -0.051 6.636 hybrid contribution -0.482 -1.613 -1.472 2.237 sum 1.289 4.782 -1.524 5.182 Atomic orbital electron populations 1.86491 1.17388 1.82239 1.50517 1.25275 0.85267 1.11361 0.96603 0.93815 0.77810 0.74020 0.85041 1.20369 1.02674 0.93711 0.98756 1.21264 0.93536 1.00651 0.91596 1.21588 1.05954 0.91518 1.01683 1.18801 0.93210 0.91756 0.86110 1.86245 1.68645 1.37950 1.28913 1.22894 0.99625 0.93852 0.88371 1.20477 0.77954 0.87969 0.83737 1.90788 1.55435 1.18672 1.79618 1.45726 1.55934 1.14523 1.19793 1.20991 0.94379 0.94926 0.85405 0.91311 1.21730 0.96332 1.00238 0.96907 1.21488 0.96971 1.01106 0.94676 1.19829 0.95960 0.97524 0.88377 0.87091 1.25258 1.01205 0.83201 0.98366 1.74186 1.18041 1.23869 1.02013 1.74196 1.21894 0.96524 1.26659 1.27280 0.98466 1.02791 0.83688 1.44107 1.48788 1.08268 1.17263 1.21535 0.96384 0.99538 0.97281 1.21823 0.97897 1.01302 0.95048 1.21269 1.09836 0.91868 0.99510 1.96757 1.94980 1.07589 1.97714 1.20873 0.95858 0.94517 0.94438 0.75405 0.87929 1.20296 1.23350 0.81549 0.80094 0.84902 0.85271 0.74000 0.88712 0.89700 0.91520 0.90867 0.72405 0.71220 0.91164 0.90980 0.92760 0.89603 0.84829 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 0.74 12.83 -148.98 -1.91 -1.17 16 2 C -0.08 0.23 2.80 71.24 0.20 0.42 16 3 Si 0.79 -4.89 29.80 68.60 2.04 -2.85 16 4 C -0.15 0.40 5.35 -19.85 -0.11 0.29 16 5 C -0.05 0.39 8.66 22.26 0.19 0.58 16 6 C -0.19 1.36 9.04 22.36 0.20 1.56 16 7 C 0.15 0.10 6.68 22.52 0.15 0.25 16 8 O -0.31 -0.80 9.01 -73.59 -0.66 -1.46 16 9 C 0.03 -0.23 5.22 71.23 0.37 0.14 16 10 C 0.51 -0.89 7.87 87.65 0.69 -0.20 16 11 O -0.57 -5.81 16.16 15.99 0.26 -5.55 16 12 N -0.71 6.46 5.08 -442.52 -2.25 4.21 16 13 C 0.15 -1.04 2.46 44.99 0.11 -0.93 16 14 H 0.07 -0.12 7.58 -2.39 -0.02 -0.14 16 15 C -0.11 1.23 5.39 30.60 0.16 1.39 16 16 C -0.10 0.75 5.19 30.60 0.16 0.91 16 17 C 0.00 -0.02 2.66 -11.54 -0.03 -0.05 16 18 H 0.11 -0.58 8.14 -2.39 -0.02 -0.60 16 19 C 0.19 0.20 6.99 137.97 0.96 1.16 16 20 N -0.34 -3.44 12.21 -50.15 -0.61 -4.05 16 21 N -0.35 -3.53 12.21 -59.99 -0.73 -4.26 16 22 C 0.17 -0.11 13.19 180.11 2.37 2.26 16 23 N -0.57 2.28 5.96 -189.86 -1.13 1.15 16 24 C -0.11 0.75 4.97 30.59 0.15 0.90 16 25 C -0.12 0.78 5.49 30.59 0.17 0.95 16 26 C -0.14 -0.67 6.24 22.40 0.14 -0.53 16 27 Br -0.06 -0.48 33.16 -20.37 -0.68 -1.16 16 28 C -0.04 -0.08 9.42 22.27 0.21 0.13 16 29 H 0.40 -3.88 8.70 -74.05 -0.64 -4.52 16 30 H 0.10 -0.10 7.96 -2.39 -0.02 -0.12 16 31 H -0.28 0.75 7.11 99.48 0.71 1.46 16 32 H -0.31 -0.81 7.11 99.48 0.71 -0.10 16 33 H 0.17 -2.29 4.90 -2.91 -0.01 -2.30 16 34 H 0.18 -2.87 6.30 -2.91 -0.02 -2.89 16 35 H 0.13 -1.98 7.65 -2.39 -0.02 -2.00 16 36 H 0.13 -1.85 7.67 -2.39 -0.02 -1.87 16 37 H 0.42 -7.11 8.60 -92.71 -0.80 -7.91 16 38 H 0.09 -1.29 8.14 -2.39 -0.02 -1.31 16 39 H 0.08 -0.96 8.14 -2.39 -0.02 -0.98 16 40 H 0.07 -0.46 8.14 -2.39 -0.02 -0.48 16 41 H 0.07 -0.36 8.14 -2.39 -0.02 -0.38 16 42 H 0.26 -2.69 8.06 -2.91 -0.02 -2.71 16 43 H 0.44 -4.87 8.29 -92.72 -0.77 -5.64 16 44 H 0.07 -0.54 7.52 -2.39 -0.02 -0.56 16 45 H 0.07 -0.41 8.14 -2.39 -0.02 -0.43 16 46 H 0.05 -0.06 8.14 -2.39 -0.02 -0.08 16 47 H 0.09 -0.76 8.14 -2.39 -0.02 -0.78 16 48 H 0.13 0.40 8.06 -2.91 -0.02 0.37 16 Total: 0.00 -39.21 414.66 -0.68 -39.89 By element: Atomic # 1 Polarization: -32.85 SS G_CDS: -1.12 Total: -33.98 kcal Atomic # 6 Polarization: 3.13 SS G_CDS: 6.11 Total: 9.24 kcal Atomic # 7 Polarization: 1.76 SS G_CDS: -4.72 Total: -2.96 kcal Atomic # 8 Polarization: -5.87 SS G_CDS: -2.32 Total: -8.19 kcal Atomic # 14 Polarization: -4.89 SS G_CDS: 2.04 Total: -2.85 kcal Atomic # 35 Polarization: -0.48 SS G_CDS: -0.68 Total: -1.16 kcal Total: -39.21 -0.68 -39.89 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16624780_6201210.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 40.236 kcal (2) G-P(sol) polarization free energy of solvation -39.208 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 1.027 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.682 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.890 kcal (6) G-S(sol) free energy of system = (1) + (5) 0.346 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.47 seconds