Wall clock time and date at job start Sun Mar 7 2021 05:37:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35960 * 116.99843 * 2 1 4 4 C 1.39454 * 120.12156 * 180.02562 * 3 2 1 5 5 O 1.34778 * 133.24262 * 359.96945 * 4 3 2 6 6 C 1.34921 * 110.84005 * 180.02562 * 5 4 3 7 7 C 1.46996 * 125.13840 * 179.97438 * 6 5 4 8 8 O 1.21650 * 120.00381 * 180.02562 * 7 6 5 9 9 N 1.34778 * 119.99672 * 0.02562 * 7 6 5 10 10 C 1.46508 * 119.99839 * 180.02562 * 9 7 6 11 11 H 1.08996 * 109.46708 * 35.00149 * 10 9 7 12 12 C 1.53003 * 109.46947 * 155.00267 * 10 9 7 13 13 C 1.52998 * 109.46933 * 179.97438 * 12 10 9 14 14 C 1.52994 * 109.47300 * 300.00220 * 13 12 10 15 15 H 1.09004 * 109.46593 * 299.99971 * 14 13 12 16 16 C 1.50695 * 109.47224 * 180.02562 * 14 13 12 17 17 N 1.30527 * 126.34738 * 94.68696 * 16 14 13 18 18 N 1.28602 * 109.67042 * 179.82124 * 17 16 14 19 19 C 1.30520 * 109.67161 * 0.45193 * 18 17 16 20 20 N 1.35485 * 107.31098 * 359.72341 * 19 18 17 21 21 C 1.52997 * 109.47294 * 59.99694 * 14 13 12 22 22 C 1.52998 * 109.47353 * 300.00008 * 21 14 13 23 23 C 1.35805 * 109.72423 * 0.02562 * 6 5 4 24 24 C 1.40609 * 119.13475 * 179.97438 * 4 3 2 25 25 C 1.39771 * 120.12105 * 359.70916 * 24 4 3 26 26 C 1.50706 * 120.09534 * 180.32043 * 25 24 4 27 27 O 1.42908 * 109.47147 * 75.24094 * 26 25 24 28 28 Si 1.86296 * 109.47438 * 195.24056 * 26 25 24 29 29 C 1.36627 * 119.81596 * 0.56088 * 25 24 4 30 30 C 1.38262 * 120.12246 * 359.97438 * 3 2 1 31 31 H 1.08994 * 109.47532 * 60.00060 * 1 2 3 32 32 H 1.09000 * 109.47078 * 180.02562 * 1 2 3 33 33 H 1.08999 * 109.47127 * 299.99760 * 1 2 3 34 34 H 0.96998 * 120.00108 * 0.02562 * 9 7 6 35 35 H 1.09005 * 109.46651 * 299.99930 * 12 10 9 36 36 H 1.08996 * 109.47141 * 59.99983 * 12 10 9 37 37 H 1.09010 * 109.46671 * 60.00084 * 13 12 10 38 38 H 1.08999 * 109.47056 * 179.97438 * 13 12 10 39 39 H 1.07997 * 126.34091 * 179.73177 * 19 18 17 40 40 H 0.97002 * 126.98776 * 179.97438 * 20 19 18 41 41 H 1.09004 * 109.47074 * 60.00572 * 21 14 13 42 42 H 1.09002 * 109.47070 * 180.02562 * 21 14 13 43 43 H 1.08996 * 109.47387 * 300.00020 * 22 21 14 44 44 H 1.08995 * 109.47280 * 180.02562 * 22 21 14 45 45 H 1.07999 * 126.95817 * 179.97438 * 23 6 5 46 46 H 1.09005 * 109.46913 * 315.24559 * 26 25 24 47 47 H 0.96701 * 114.00066 * 180.02562 * 27 26 25 48 48 H 1.48499 * 110.00074 * 178.67807 * 28 26 25 49 49 H 1.48501 * 110.00015 * 300.00332 * 28 26 25 50 50 H 1.08002 * 119.75873 * 179.73878 * 29 25 24 51 51 H 1.07994 * 119.66015 * 0.02719 * 30 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0462 1.2114 0.0000 4 6 3.4387 1.2874 -0.0005 5 8 4.4141 0.3574 -0.0006 6 6 5.6316 0.9388 -0.0007 7 6 6.9131 0.2186 -0.0002 8 8 7.9595 0.8389 0.0001 9 7 6.9286 -1.1291 -0.0002 10 6 8.2058 -1.8469 0.0009 11 1 8.9345 -1.2911 0.5909 12 6 8.0093 -3.2365 0.6103 13 6 9.3430 -3.9864 0.6108 14 6 9.8498 -4.1266 -0.8259 15 1 9.1207 -4.6823 -1.4157 16 6 11.1630 -4.8657 -0.8255 17 7 11.3290 -6.1482 -1.0027 18 7 12.5812 -6.4349 -0.9437 19 6 13.2702 -5.3498 -0.7168 20 7 12.3899 -4.3230 -0.6354 21 6 10.0462 -2.7371 -1.4354 22 6 8.7125 -1.9872 -1.4360 23 6 5.4944 2.2899 -0.0001 24 6 4.0553 2.5511 -0.0011 25 6 3.2764 3.7116 -0.0072 26 6 3.9380 5.0657 -0.0151 27 8 4.4549 5.3358 -1.3197 28 14 2.6882 6.3702 0.4399 29 6 1.9136 3.6151 -0.0011 30 6 1.2956 2.3726 -0.0005 31 1 -0.3634 0.5138 -0.8899 32 1 -0.3633 -1.0277 0.0005 33 1 -0.3633 0.5138 0.8900 34 1 6.0943 -1.6238 -0.0008 35 1 7.6479 -3.1365 1.6338 36 1 7.2806 -3.7923 0.0203 37 1 10.0720 -3.4306 1.2007 38 1 9.2031 -4.9761 1.0454 39 1 14.3431 -5.2828 -0.6133 40 1 12.5960 -3.3891 -0.4734 41 1 10.7753 -2.1814 -0.8456 42 1 10.4068 -2.8370 -2.4592 43 1 7.9835 -2.5428 -2.0258 44 1 8.8524 -0.9975 -1.8706 45 1 6.2873 3.0231 0.0004 46 1 4.7535 5.0758 0.7081 47 1 4.8958 6.1928 -1.3985 48 1 3.3356 7.7064 0.4668 49 1 1.5711 6.3665 -0.5385 50 1 1.3126 4.5125 -0.0015 51 1 0.2174 2.3119 -0.0005 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16624780_6672420.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:37:26 Heat of formation + Delta-G solvation = 8.617488 kcal Electronic energy + Delta-G solvation = -36811.636657 eV Core-core repulsion = 31873.969851 eV Total energy + Delta-G solvation = -4937.666806 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 399.167 amu Computer time = 1.51 seconds Orbital eigenvalues (eV) -44.10601 -43.65690 -41.21085 -40.56894 -39.33131 -39.00122 -37.20292 -35.87329 -34.57235 -33.57349 -32.61857 -32.07721 -31.94071 -31.02609 -29.65987 -28.61053 -26.34882 -25.53788 -24.38275 -23.99797 -23.94704 -23.24356 -22.18632 -21.77292 -21.60531 -21.13517 -19.67489 -19.35581 -18.83761 -18.58805 -18.48331 -17.63420 -17.53545 -17.00970 -16.80752 -16.65583 -16.43677 -16.33444 -16.28838 -15.83681 -15.67128 -15.56305 -15.26188 -14.97070 -14.75802 -14.52461 -14.25404 -14.11777 -14.02897 -13.90538 -13.85440 -13.46832 -13.41572 -13.24199 -12.85730 -12.67608 -12.53134 -12.45632 -12.42992 -12.34040 -12.09253 -11.85901 -11.79773 -11.74507 -11.61454 -11.44484 -11.23515 -10.93773 -10.53076 -10.30117 -10.16222 -9.75543 -8.97304 -5.03697 -0.58362 0.14429 0.71061 0.83037 1.18028 1.28941 1.51423 1.78015 1.86068 1.90579 1.94312 2.03626 2.05904 2.38457 3.06449 3.18295 3.31666 3.40303 3.47370 3.56099 3.65792 3.67704 3.80264 3.84764 3.92613 3.95827 3.98611 4.02133 4.10585 4.11047 4.13323 4.15303 4.17355 4.20949 4.31729 4.35081 4.46255 4.46694 4.47534 4.49777 4.61173 4.81255 4.82484 4.85010 4.89032 4.89808 4.90638 5.06009 5.07261 5.09996 5.13813 5.23857 5.27853 5.34922 5.63341 6.05220 6.15816 6.31013 6.39595 6.89610 7.77701 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.310 6.310 3 C 0.150 3.850 4 C 0.047 3.953 5 O -0.173 6.173 6 C -0.025 4.025 7 C 0.605 3.395 8 O -0.511 6.511 9 N -0.714 5.714 10 C 0.143 3.857 11 H 0.094 0.906 12 C -0.127 4.127 13 C -0.106 4.106 14 C -0.004 4.004 15 H 0.111 0.889 16 C 0.186 3.814 17 N -0.291 5.291 18 N -0.296 5.296 19 C 0.154 3.846 20 N -0.581 5.581 21 C -0.114 4.114 22 C -0.129 4.129 23 C -0.103 4.103 24 C -0.083 4.083 25 C -0.051 4.051 26 C -0.075 4.075 27 O -0.533 6.533 28 Si 0.688 3.312 29 C -0.090 4.090 30 C -0.177 4.177 31 H 0.060 0.940 32 H 0.105 0.895 33 H 0.061 0.939 34 H 0.409 0.591 35 H 0.079 0.921 36 H 0.078 0.922 37 H 0.067 0.933 38 H 0.081 0.919 39 H 0.223 0.777 40 H 0.429 0.571 41 H 0.065 0.935 42 H 0.075 0.925 43 H 0.074 0.926 44 H 0.076 0.924 45 H 0.172 0.828 46 H 0.077 0.923 47 H 0.380 0.620 48 H -0.259 1.259 49 H -0.253 1.253 50 H 0.140 0.860 51 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.673 4.475 3.629 6.832 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.224 6.224 3 C 0.104 3.896 4 C -0.001 4.001 5 O -0.075 6.075 6 C -0.076 4.076 7 C 0.390 3.610 8 O -0.388 6.388 9 N -0.364 5.364 10 C 0.039 3.961 11 H 0.112 0.888 12 C -0.165 4.165 13 C -0.145 4.145 14 C -0.025 4.025 15 H 0.129 0.871 16 C -0.083 4.083 17 N -0.131 5.131 18 N -0.135 5.135 19 C -0.135 4.135 20 N -0.194 5.194 21 C -0.153 4.153 22 C -0.168 4.168 23 C -0.124 4.124 24 C -0.084 4.084 25 C -0.051 4.051 26 C -0.184 4.184 27 O -0.340 6.340 28 Si 0.589 3.411 29 C -0.108 4.108 30 C -0.196 4.196 31 H 0.079 0.921 32 H 0.124 0.876 33 H 0.080 0.920 34 H 0.245 0.755 35 H 0.098 0.902 36 H 0.096 0.904 37 H 0.086 0.914 38 H 0.100 0.900 39 H 0.239 0.761 40 H 0.269 0.731 41 H 0.084 0.916 42 H 0.094 0.906 43 H 0.092 0.908 44 H 0.095 0.905 45 H 0.190 0.810 46 H 0.095 0.905 47 H 0.228 0.772 48 H -0.184 1.184 49 H -0.177 1.177 50 H 0.158 0.842 51 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges -3.869 2.892 2.987 5.679 hybrid contribution 0.838 2.180 -0.546 2.398 sum -3.031 5.071 2.441 6.393 Atomic orbital electron populations 1.23193 0.77306 1.04766 1.01821 1.86168 1.22167 1.25636 1.88380 1.17729 0.86482 0.85884 0.99461 1.18728 0.87430 0.86839 1.07132 1.84046 1.12611 1.34672 1.76150 1.21935 0.83963 0.92558 1.09094 1.16611 0.85406 0.82159 0.76823 1.90906 1.30342 1.67495 1.50018 1.45972 1.10482 1.05659 1.74290 1.21144 0.85211 0.92669 0.97067 0.88775 1.21818 0.98190 0.94173 1.02273 1.21527 0.96552 1.01683 0.94746 1.19790 0.89236 0.94786 0.98671 0.87113 1.24856 0.88406 0.91793 1.03260 1.74311 1.10062 1.10176 1.18561 1.74310 0.98028 1.23782 1.17413 1.26581 0.99135 0.83681 1.04115 1.44135 1.07307 1.12716 1.55216 1.21596 0.98112 0.93830 1.01745 1.21917 0.96714 1.01569 0.96592 1.22692 0.94689 0.94317 1.00707 1.19397 0.92642 0.92119 1.04248 1.18332 0.92365 0.92012 1.02395 1.24778 1.04913 1.00626 0.88079 1.86622 1.76959 1.41138 1.29318 0.94973 0.79616 0.76926 0.89604 1.20531 0.93360 0.97814 0.99092 1.20960 1.00404 0.90438 1.07748 0.92139 0.87622 0.92007 0.75517 0.90246 0.90365 0.91394 0.90023 0.76116 0.73123 0.91597 0.90598 0.90762 0.90496 0.81040 0.90523 0.77190 1.18390 1.17742 0.84246 0.83387 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.06 9.81 101.05 0.99 0.93 16 2 O -0.31 -0.43 10.50 -19.61 -0.21 -0.64 16 3 C 0.15 0.28 6.70 -39.12 -0.26 0.01 16 4 C 0.05 0.15 7.35 -38.24 -0.28 -0.13 16 5 O -0.17 -0.52 10.28 2.67 0.03 -0.49 16 6 C -0.03 -0.07 7.07 -36.91 -0.26 -0.33 16 7 C 0.60 1.30 7.76 -12.71 -0.10 1.20 16 8 O -0.51 -2.36 16.49 5.23 0.09 -2.28 16 9 N -0.71 0.49 5.07 -55.01 -0.28 0.21 16 10 C 0.14 -0.26 2.46 -67.92 -0.17 -0.43 16 11 H 0.09 -0.07 7.58 -51.93 -0.39 -0.46 16 12 C -0.13 0.41 5.39 -26.73 -0.14 0.26 16 13 C -0.11 0.28 5.19 -26.74 -0.14 0.14 16 14 C 0.00 0.01 2.66 -91.78 -0.24 -0.24 16 15 H 0.11 -0.17 8.14 -51.93 -0.42 -0.59 16 16 C 0.19 0.14 6.99 -154.98 -1.08 -0.94 16 17 N -0.29 -1.42 12.21 32.80 0.40 -1.02 16 18 N -0.30 -1.41 12.21 29.68 0.36 -1.05 16 19 C 0.15 0.00 13.19 -89.95 -1.19 -1.19 16 20 N -0.58 0.94 5.96 -11.36 -0.07 0.87 16 21 C -0.11 0.32 4.97 -26.73 -0.13 0.19 16 22 C -0.13 0.25 5.49 -26.73 -0.15 0.10 16 23 C -0.10 -0.27 10.68 -37.23 -0.40 -0.67 16 24 C -0.08 -0.23 6.16 -105.21 -0.65 -0.88 16 25 C -0.05 -0.08 5.30 -104.63 -0.55 -0.63 16 26 C -0.07 0.01 2.70 36.01 0.10 0.11 16 27 O -0.53 -0.63 12.86 -35.23 -0.45 -1.08 16 28 Si 0.69 -1.08 30.20 -169.99 -5.13 -6.21 16 29 C -0.09 -0.01 8.62 -39.97 -0.34 -0.36 16 30 C -0.18 0.03 9.03 -39.37 -0.36 -0.32 16 31 H 0.06 -0.22 7.66 -51.93 -0.40 -0.62 16 32 H 0.11 -0.43 8.14 -51.93 -0.42 -0.85 16 33 H 0.06 -0.25 7.66 -51.93 -0.40 -0.65 16 34 H 0.41 -0.84 8.32 -40.82 -0.34 -1.18 16 35 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 36 H 0.08 -0.29 8.14 -51.93 -0.42 -0.71 16 37 H 0.07 -0.20 8.14 -51.92 -0.42 -0.62 16 38 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 39 H 0.22 -0.96 8.06 -52.49 -0.42 -1.38 16 40 H 0.43 -2.13 8.29 -40.82 -0.34 -2.47 16 41 H 0.07 -0.24 7.52 -51.93 -0.39 -0.63 16 42 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 43 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 44 H 0.08 -0.02 8.14 -51.93 -0.42 -0.44 16 45 H 0.17 0.26 8.06 -52.49 -0.42 -0.16 16 46 H 0.08 -0.12 7.96 -51.93 -0.41 -0.53 16 47 H 0.38 -1.09 8.74 45.56 0.40 -0.69 16 48 H -0.26 -0.13 7.11 56.52 0.40 0.27 16 49 H -0.25 -0.22 6.75 56.52 0.38 0.16 16 50 H 0.14 -0.24 4.85 -52.49 -0.25 -0.49 16 51 H 0.15 -0.46 6.26 -52.49 -0.33 -0.78 16 LS Contribution 421.37 15.07 6.35 6.35 Total: 0.00 -12.76 421.37 -10.99 -23.75 By element: Atomic # 1 Polarization: -8.52 SS G_CDS: -6.72 Total: -15.25 kcal Atomic # 6 Polarization: 2.19 SS G_CDS: -5.36 Total: -3.17 kcal Atomic # 7 Polarization: -1.41 SS G_CDS: 0.42 Total: -0.99 kcal Atomic # 8 Polarization: -3.94 SS G_CDS: -0.55 Total: -4.48 kcal Atomic # 14 Polarization: -1.08 SS G_CDS: -5.13 Total: -6.21 kcal Total LS contribution 6.35 Total: 6.35 kcal Total: -12.76 -10.99 -23.75 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16624780_6672420.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 32.369 kcal (2) G-P(sol) polarization free energy of solvation -12.759 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 19.610 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.992 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.751 kcal (6) G-S(sol) free energy of system = (1) + (5) 8.617 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.51 seconds