Wall clock time and date at job start Sun Mar 7 2021 05:37:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35960 * 116.99843 * 2 1 4 4 C 1.39454 * 120.12156 * 180.02562 * 3 2 1 5 5 O 1.34778 * 133.24262 * 359.96945 * 4 3 2 6 6 C 1.34921 * 110.84005 * 180.02562 * 5 4 3 7 7 C 1.46996 * 125.13840 * 179.97438 * 6 5 4 8 8 O 1.21650 * 120.00381 * 180.02562 * 7 6 5 9 9 N 1.34778 * 119.99672 * 0.02562 * 7 6 5 10 10 C 1.46508 * 119.99839 * 180.02562 * 9 7 6 11 11 H 1.08996 * 109.46708 * 35.00149 * 10 9 7 12 12 C 1.53003 * 109.46947 * 155.00267 * 10 9 7 13 13 C 1.52998 * 109.46933 * 179.97438 * 12 10 9 14 14 C 1.52994 * 109.47300 * 300.00220 * 13 12 10 15 15 H 1.09004 * 109.46593 * 299.99971 * 14 13 12 16 16 C 1.50695 * 109.47224 * 180.02562 * 14 13 12 17 17 N 1.30527 * 126.34738 * 94.68696 * 16 14 13 18 18 N 1.28602 * 109.67042 * 179.82124 * 17 16 14 19 19 C 1.30520 * 109.67161 * 0.45193 * 18 17 16 20 20 N 1.35485 * 107.31098 * 359.72341 * 19 18 17 21 21 C 1.52997 * 109.47294 * 59.99694 * 14 13 12 22 22 C 1.52998 * 109.47353 * 300.00008 * 21 14 13 23 23 C 1.35805 * 109.72423 * 0.02562 * 6 5 4 24 24 C 1.40609 * 119.13475 * 179.97438 * 4 3 2 25 25 C 1.39771 * 120.12105 * 359.70916 * 24 4 3 26 26 C 1.50706 * 120.09534 * 180.32043 * 25 24 4 27 27 O 1.42908 * 109.47147 * 75.24094 * 26 25 24 28 28 Si 1.86296 * 109.47438 * 195.24056 * 26 25 24 29 29 C 1.36627 * 119.81596 * 0.56088 * 25 24 4 30 30 C 1.38262 * 120.12246 * 359.97438 * 3 2 1 31 31 H 1.08994 * 109.47532 * 60.00060 * 1 2 3 32 32 H 1.09000 * 109.47078 * 180.02562 * 1 2 3 33 33 H 1.08999 * 109.47127 * 299.99760 * 1 2 3 34 34 H 0.96998 * 120.00108 * 0.02562 * 9 7 6 35 35 H 1.09005 * 109.46651 * 299.99930 * 12 10 9 36 36 H 1.08996 * 109.47141 * 59.99983 * 12 10 9 37 37 H 1.09010 * 109.46671 * 60.00084 * 13 12 10 38 38 H 1.08999 * 109.47056 * 179.97438 * 13 12 10 39 39 H 1.07997 * 126.34091 * 179.73177 * 19 18 17 40 40 H 0.97002 * 126.98776 * 179.97438 * 20 19 18 41 41 H 1.09004 * 109.47074 * 60.00572 * 21 14 13 42 42 H 1.09002 * 109.47070 * 180.02562 * 21 14 13 43 43 H 1.08996 * 109.47387 * 300.00020 * 22 21 14 44 44 H 1.08995 * 109.47280 * 180.02562 * 22 21 14 45 45 H 1.07999 * 126.95817 * 179.97438 * 23 6 5 46 46 H 1.09005 * 109.46913 * 315.24559 * 26 25 24 47 47 H 0.96701 * 114.00066 * 180.02562 * 27 26 25 48 48 H 1.48499 * 110.00074 * 178.67807 * 28 26 25 49 49 H 1.48501 * 110.00015 * 300.00332 * 28 26 25 50 50 H 1.08002 * 119.75873 * 179.73878 * 29 25 24 51 51 H 1.07994 * 119.66015 * 0.02719 * 30 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0462 1.2114 0.0000 4 6 3.4387 1.2874 -0.0005 5 8 4.4141 0.3574 -0.0006 6 6 5.6316 0.9388 -0.0007 7 6 6.9131 0.2186 -0.0002 8 8 7.9595 0.8389 0.0001 9 7 6.9286 -1.1291 -0.0002 10 6 8.2058 -1.8469 0.0009 11 1 8.9345 -1.2911 0.5909 12 6 8.0093 -3.2365 0.6103 13 6 9.3430 -3.9864 0.6108 14 6 9.8498 -4.1266 -0.8259 15 1 9.1207 -4.6823 -1.4157 16 6 11.1630 -4.8657 -0.8255 17 7 11.3290 -6.1482 -1.0027 18 7 12.5812 -6.4349 -0.9437 19 6 13.2702 -5.3498 -0.7168 20 7 12.3899 -4.3230 -0.6354 21 6 10.0462 -2.7371 -1.4354 22 6 8.7125 -1.9872 -1.4360 23 6 5.4944 2.2899 -0.0001 24 6 4.0553 2.5511 -0.0011 25 6 3.2764 3.7116 -0.0072 26 6 3.9380 5.0657 -0.0151 27 8 4.4549 5.3358 -1.3197 28 14 2.6882 6.3702 0.4399 29 6 1.9136 3.6151 -0.0011 30 6 1.2956 2.3726 -0.0005 31 1 -0.3634 0.5138 -0.8899 32 1 -0.3633 -1.0277 0.0005 33 1 -0.3633 0.5138 0.8900 34 1 6.0943 -1.6238 -0.0008 35 1 7.6479 -3.1365 1.6338 36 1 7.2806 -3.7923 0.0203 37 1 10.0720 -3.4306 1.2007 38 1 9.2031 -4.9761 1.0454 39 1 14.3431 -5.2828 -0.6133 40 1 12.5960 -3.3891 -0.4734 41 1 10.7753 -2.1814 -0.8456 42 1 10.4068 -2.8370 -2.4592 43 1 7.9835 -2.5428 -2.0258 44 1 8.8524 -0.9975 -1.8706 45 1 6.2873 3.0231 0.0004 46 1 4.7535 5.0758 0.7081 47 1 4.8958 6.1928 -1.3985 48 1 3.3356 7.7064 0.4668 49 1 1.5711 6.3665 -0.5385 50 1 1.3126 4.5125 -0.0015 51 1 0.2174 2.3119 -0.0005 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16624780_6672420.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:37:24 Heat of formation + Delta-G solvation = 5.885079 kcal Electronic energy + Delta-G solvation = -36811.755143 eV Core-core repulsion = 31873.969851 eV Total energy + Delta-G solvation = -4937.785292 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 399.167 amu Computer time = 1.58 seconds Orbital eigenvalues (eV) -44.14823 -43.76833 -41.26149 -40.56432 -39.33082 -39.00832 -37.21925 -35.91269 -34.59965 -33.67750 -32.64611 -31.97601 -31.90960 -31.08343 -29.65532 -28.47591 -26.32089 -25.56270 -24.35674 -24.02872 -23.90033 -23.23743 -22.18410 -21.79741 -21.69625 -21.04372 -19.70570 -19.30080 -18.89091 -18.59323 -18.48457 -17.74898 -17.53652 -17.05163 -16.84903 -16.61331 -16.43296 -16.32397 -16.25218 -15.87220 -15.63391 -15.51988 -15.16132 -14.89248 -14.75610 -14.58104 -14.25836 -14.12135 -13.99845 -13.93002 -13.76786 -13.39201 -13.31436 -13.23003 -12.87489 -12.54627 -12.46991 -12.38276 -12.34073 -12.22429 -12.06775 -11.83913 -11.74380 -11.72471 -11.60710 -11.53785 -11.25592 -11.02985 -10.49421 -10.34108 -10.23739 -9.84498 -9.02093 -4.90957 -0.68614 0.07541 0.59978 0.85719 1.16212 1.28684 1.61171 1.84366 1.85553 1.88283 1.91764 1.93390 2.12205 2.34482 3.09873 3.19183 3.36454 3.51802 3.54084 3.62637 3.70142 3.79965 3.81770 3.92421 3.96211 3.98961 4.09197 4.13161 4.18409 4.28108 4.28758 4.32388 4.36314 4.38457 4.41790 4.42658 4.43531 4.49554 4.60301 4.75046 4.76509 4.81604 4.84657 4.95668 4.98523 5.02308 5.02909 5.05719 5.14147 5.17323 5.21363 5.23224 5.30740 5.38170 5.56954 6.17986 6.24116 6.28182 6.57598 6.81017 7.70578 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.013 3.987 2 O -0.331 6.331 3 C 0.138 3.862 4 C 0.022 3.978 5 O -0.179 6.179 6 C -0.033 4.033 7 C 0.605 3.395 8 O -0.541 6.541 9 N -0.700 5.700 10 C 0.144 3.856 11 H 0.086 0.914 12 C -0.118 4.118 13 C -0.100 4.100 14 C 0.002 3.998 15 H 0.107 0.893 16 C 0.192 3.808 17 N -0.343 5.343 18 N -0.355 5.355 19 C 0.169 3.831 20 N -0.568 5.568 21 C -0.106 4.106 22 C -0.125 4.125 23 C -0.112 4.112 24 C -0.098 4.098 25 C -0.065 4.065 26 C -0.091 4.091 27 O -0.557 6.557 28 Si 0.776 3.224 29 C -0.090 4.090 30 C -0.167 4.167 31 H 0.071 0.929 32 H 0.117 0.883 33 H 0.077 0.923 34 H 0.417 0.583 35 H 0.084 0.916 36 H 0.086 0.914 37 H 0.074 0.926 38 H 0.073 0.927 39 H 0.262 0.738 40 H 0.446 0.554 41 H 0.079 0.921 42 H 0.074 0.926 43 H 0.078 0.922 44 H 0.060 0.940 45 H 0.175 0.825 46 H 0.087 0.913 47 H 0.394 0.606 48 H -0.286 1.286 49 H -0.282 1.282 50 H 0.160 0.840 51 H 0.180 0.820 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.587 5.455 4.243 8.295 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.080 4.080 2 O -0.245 6.245 3 C 0.092 3.908 4 C -0.026 4.026 5 O -0.081 6.081 6 C -0.083 4.083 7 C 0.391 3.609 8 O -0.420 6.420 9 N -0.350 5.350 10 C 0.040 3.960 11 H 0.105 0.895 12 C -0.156 4.156 13 C -0.139 4.139 14 C -0.019 4.019 15 H 0.125 0.875 16 C -0.079 4.079 17 N -0.182 5.182 18 N -0.193 5.193 19 C -0.121 4.121 20 N -0.183 5.183 21 C -0.144 4.144 22 C -0.163 4.163 23 C -0.133 4.133 24 C -0.099 4.099 25 C -0.066 4.066 26 C -0.199 4.199 27 O -0.367 6.367 28 Si 0.680 3.320 29 C -0.108 4.108 30 C -0.185 4.185 31 H 0.090 0.910 32 H 0.135 0.865 33 H 0.096 0.904 34 H 0.254 0.746 35 H 0.103 0.897 36 H 0.105 0.895 37 H 0.093 0.907 38 H 0.092 0.908 39 H 0.277 0.723 40 H 0.289 0.711 41 H 0.097 0.903 42 H 0.093 0.907 43 H 0.096 0.904 44 H 0.079 0.921 45 H 0.193 0.807 46 H 0.105 0.895 47 H 0.245 0.755 48 H -0.213 1.213 49 H -0.209 1.209 50 H 0.177 0.823 51 H 0.197 0.803 Dipole moment (debyes) X Y Z Total from point charges -4.782 3.843 3.609 7.118 hybrid contribution 1.095 1.911 -0.761 2.330 sum -3.687 5.754 2.848 7.403 Atomic orbital electron populations 1.23490 0.75345 1.06072 1.03120 1.86141 1.24283 1.25657 1.88425 1.17949 0.86185 0.86773 0.99906 1.19151 0.88215 0.87081 1.08166 1.84011 1.12717 1.34930 1.76476 1.22025 0.84130 0.92751 1.09443 1.16606 0.84833 0.82829 0.76674 1.90880 1.31132 1.68213 1.51804 1.45954 1.11412 1.04838 1.72821 1.21217 0.84447 0.93100 0.97196 0.89547 1.21753 0.98133 0.93078 1.02608 1.21465 0.96926 1.01363 0.94153 1.19819 0.88070 0.94809 0.99204 0.87539 1.25163 0.89748 0.91113 1.01888 1.74193 1.10729 1.12427 1.20898 1.74195 0.98557 1.26357 1.20238 1.27293 1.00551 0.82834 1.01415 1.44084 1.06324 1.13454 1.54408 1.21527 0.97894 0.93156 1.01865 1.21850 0.97353 1.00800 0.96329 1.22840 0.95070 0.94569 1.00793 1.19601 0.92693 0.92708 1.04942 1.18649 0.93070 0.92313 1.02545 1.25128 1.06166 1.00715 0.87851 1.86572 1.77462 1.42566 1.30131 0.93967 0.76600 0.73813 0.87640 1.20830 0.93048 0.98783 0.98128 1.21342 1.01827 0.89537 1.05843 0.91033 0.86487 0.90401 0.74628 0.89724 0.89502 0.90722 0.90818 0.72278 0.71090 0.90279 0.90720 0.90378 0.92106 0.80724 0.89520 0.75508 1.21342 1.20885 0.82300 0.80309 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.09 9.81 113.37 1.11 1.03 16 2 O -0.33 -0.95 10.50 -93.09 -0.98 -1.92 16 3 C 0.14 0.54 6.70 22.57 0.15 0.69 16 4 C 0.02 0.17 7.35 23.14 0.17 0.34 16 5 O -0.18 -1.38 10.28 -13.37 -0.14 -1.52 16 6 C -0.03 -0.23 7.07 24.00 0.17 -0.06 16 7 C 0.61 3.50 7.76 86.54 0.67 4.17 16 8 O -0.54 -5.90 16.49 -4.19 -0.07 -5.97 16 9 N -0.70 0.40 5.07 -446.19 -2.26 -1.86 16 10 C 0.14 -0.48 2.46 44.99 0.11 -0.37 16 11 H 0.09 -0.10 7.58 -2.39 -0.02 -0.11 16 12 C -0.12 0.78 5.39 30.59 0.16 0.95 16 13 C -0.10 0.54 5.19 30.59 0.16 0.70 16 14 C 0.00 -0.01 2.66 -11.54 -0.03 -0.04 16 15 H 0.11 -0.27 8.14 -2.38 -0.02 -0.29 16 16 C 0.19 0.37 6.99 137.97 0.96 1.33 16 17 N -0.34 -3.81 12.21 -50.15 -0.61 -4.42 16 18 N -0.35 -3.76 12.21 -60.00 -0.73 -4.49 16 19 C 0.17 -0.08 13.19 180.12 2.37 2.30 16 20 N -0.57 2.18 5.96 -189.87 -1.13 1.05 16 21 C -0.11 0.61 4.97 30.59 0.15 0.76 16 22 C -0.12 0.44 5.49 30.59 0.17 0.61 16 23 C -0.11 -0.80 10.68 23.79 0.25 -0.54 16 24 C -0.10 -0.68 6.16 -20.24 -0.12 -0.81 16 25 C -0.07 -0.22 5.30 -19.87 -0.11 -0.32 16 26 C -0.09 0.01 2.70 71.24 0.19 0.20 16 27 O -0.56 -1.62 12.86 -148.98 -1.92 -3.53 16 28 Si 0.78 -2.98 30.20 68.60 2.07 -0.91 16 29 C -0.09 0.04 8.62 22.02 0.19 0.23 16 30 C -0.17 0.22 9.03 22.40 0.20 0.42 16 31 H 0.07 -0.62 7.66 -2.39 -0.02 -0.64 16 32 H 0.12 -1.06 8.14 -2.39 -0.02 -1.08 16 33 H 0.08 -0.76 7.66 -2.39 -0.02 -0.78 16 34 H 0.42 -1.45 8.32 -92.71 -0.77 -2.22 16 35 H 0.08 -0.59 8.14 -2.38 -0.02 -0.61 16 36 H 0.09 -0.69 8.14 -2.39 -0.02 -0.71 16 37 H 0.07 -0.48 8.14 -2.38 -0.02 -0.50 16 38 H 0.07 -0.22 8.14 -2.39 -0.02 -0.24 16 39 H 0.26 -2.70 8.06 -2.91 -0.02 -2.73 16 40 H 0.45 -5.02 8.29 -92.71 -0.77 -5.79 16 41 H 0.08 -0.65 7.52 -2.38 -0.02 -0.67 16 42 H 0.07 -0.37 8.14 -2.39 -0.02 -0.39 16 43 H 0.08 -0.32 8.14 -2.39 -0.02 -0.34 16 44 H 0.06 0.03 8.14 -2.39 -0.02 0.01 16 45 H 0.18 0.91 8.06 -2.91 -0.02 0.88 16 46 H 0.09 -0.23 7.96 -2.38 -0.02 -0.25 16 47 H 0.39 -2.07 8.74 -74.06 -0.65 -2.72 16 48 H -0.29 -0.19 7.11 99.48 0.71 0.52 16 49 H -0.28 -0.28 6.75 99.48 0.67 0.40 16 50 H 0.16 -0.78 4.85 -2.91 -0.01 -0.79 16 51 H 0.18 -1.51 6.26 -2.91 -0.02 -1.53 16 Total: 0.00 -32.60 421.37 0.02 -32.58 By element: Atomic # 1 Polarization: -19.42 SS G_CDS: -1.15 Total: -20.57 kcal Atomic # 6 Polarization: 4.63 SS G_CDS: 6.95 Total: 11.58 kcal Atomic # 7 Polarization: -4.99 SS G_CDS: -4.74 Total: -9.73 kcal Atomic # 8 Polarization: -9.84 SS G_CDS: -3.10 Total: -12.94 kcal Atomic # 14 Polarization: -2.98 SS G_CDS: 2.07 Total: -0.91 kcal Total: -32.60 0.02 -32.58 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16624780_6672420.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 38.464 kcal (2) G-P(sol) polarization free energy of solvation -32.603 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 5.862 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.023 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.579 kcal (6) G-S(sol) free energy of system = (1) + (5) 5.885 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.58 seconds