Wall clock time and date at job start Sun Mar 7 2021 05:37:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.33811 * 122.45335 * 2 1 4 4 C 1.50705 * 124.52155 * 359.97383 * 3 2 1 5 5 O 1.42903 * 109.46876 * 30.00285 * 4 3 2 6 6 Si 1.86300 * 109.47215 * 149.99894 * 4 3 2 7 7 S 1.70616 * 110.96052 * 179.73568 * 3 2 1 8 8 C 1.75840 * 91.55896 * 0.30784 * 7 3 2 9 9 C 1.46582 * 125.45354 * 179.97438 * 8 7 3 10 10 O 1.21706 * 119.99398 * 179.69367 * 9 8 7 11 11 N 1.34770 * 120.00338 * 359.68585 * 9 8 7 12 12 C 1.46500 * 120.00256 * 180.02562 * 11 9 8 13 13 H 1.08998 * 109.46845 * 325.00694 * 12 11 9 14 14 C 1.53006 * 109.47249 * 84.99846 * 12 11 9 15 15 C 1.52997 * 109.47164 * 180.02562 * 14 12 11 16 16 C 1.53002 * 109.46978 * 299.99874 * 15 14 12 17 17 H 1.08992 * 109.47056 * 300.00064 * 16 15 14 18 18 C 1.50701 * 109.46958 * 180.02562 * 16 15 14 19 19 N 1.30521 * 126.34592 * 144.69130 * 18 16 15 20 20 N 1.28593 * 109.67203 * 179.82774 * 19 18 16 21 21 C 1.30523 * 109.67317 * 0.44319 * 20 19 18 22 22 N 1.35490 * 107.30631 * 359.73292 * 21 20 19 23 23 C 1.52996 * 109.46891 * 60.00410 * 16 15 14 24 24 C 1.52997 * 109.47473 * 205.00145 * 12 11 9 25 25 C 1.36644 * 109.08210 * 359.69198 * 8 7 3 26 26 H 1.08998 * 109.47234 * 269.99900 * 1 2 3 27 27 H 1.08998 * 109.46854 * 30.00293 * 1 2 3 28 28 H 1.09001 * 109.46563 * 150.00064 * 1 2 3 29 29 H 1.09000 * 109.47321 * 270.00705 * 4 3 2 30 30 H 0.96693 * 114.00105 * 180.02562 * 5 4 3 31 31 H 1.48506 * 109.99873 * 178.68155 * 6 4 3 32 32 H 1.48492 * 110.00371 * 300.00322 * 6 4 3 33 33 H 0.97005 * 120.00370 * 0.02562 * 11 9 8 34 34 H 1.09001 * 109.47002 * 60.00085 * 14 12 11 35 35 H 1.09000 * 109.47050 * 300.00351 * 14 12 11 36 36 H 1.09002 * 109.47045 * 180.02562 * 15 14 12 37 37 H 1.09001 * 109.47375 * 59.99966 * 15 14 12 38 38 H 1.07997 * 126.34438 * 179.73054 * 21 20 19 39 39 H 0.96997 * 126.97787 * 179.97438 * 22 21 20 40 40 H 1.09004 * 109.47368 * 179.97438 * 23 16 15 41 41 H 1.09001 * 109.47372 * 59.99964 * 23 16 15 42 42 H 1.09002 * 109.47153 * 59.99757 * 24 12 11 43 43 H 1.09001 * 109.46832 * 299.99948 * 24 12 11 44 44 H 1.08002 * 123.34969 * 180.20518 * 25 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2251 1.1291 0.0000 4 6 1.6356 2.5161 -0.0006 5 8 0.3752 2.4983 0.6727 6 14 2.7923 3.6829 0.8778 7 16 3.8970 0.7892 0.0074 8 6 3.5937 -0.9428 0.0010 9 6 4.6232 -1.9863 0.0027 10 8 4.3001 -3.1597 0.0035 11 7 5.9273 -1.6464 0.0032 12 6 6.9562 -2.6893 0.0042 13 1 6.6117 -3.5388 0.5939 14 6 7.2256 -3.1415 -1.4324 15 6 8.2996 -4.2311 -1.4312 16 6 9.5883 -3.6762 -0.8211 17 1 9.9331 -2.8268 -1.4107 18 6 10.6465 -4.7492 -0.8204 19 7 11.9262 -4.5738 -1.0080 20 7 12.5330 -5.7054 -0.9380 21 6 11.6669 -6.6553 -0.7119 22 7 10.4449 -6.0756 -0.6308 23 6 9.3189 -3.2241 0.6155 24 6 8.2447 -2.1339 0.6142 25 6 2.2446 -1.1601 0.0007 26 1 -0.3633 0.0000 1.0276 27 1 -0.3633 0.8900 -0.5139 28 1 -0.3632 -0.8900 -0.5138 29 1 1.4938 2.8502 -1.0284 30 1 -0.0629 3.3594 0.7102 31 1 2.2374 5.0602 0.8564 32 1 2.9938 3.2383 2.2802 33 1 6.1848 -0.7111 0.0028 34 1 7.5700 -2.2919 -2.0222 35 1 6.3076 -3.5371 -1.8670 36 1 8.4919 -4.5529 -2.4547 37 1 7.9549 -5.0805 -0.8415 38 1 11.8840 -7.7081 -0.6086 39 1 9.5979 -6.5200 -0.4701 40 1 10.2371 -2.8291 1.0505 41 1 8.9741 -4.0735 1.2052 42 1 8.0528 -1.8118 1.6377 43 1 8.5891 -1.2844 0.0245 44 1 1.8019 -2.1452 0.0004 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16624780_6739946.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:37:30 Heat of formation + Delta-G solvation = 32.436211 kcal Electronic energy + Delta-G solvation = -27633.207502 eV Core-core repulsion = 23679.542465 eV Total energy + Delta-G solvation = -3953.665037 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 349.125 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -44.10423 -41.19974 -39.98977 -39.17274 -37.57599 -35.74546 -34.56115 -32.82639 -32.05797 -31.94374 -30.24107 -29.67102 -26.58434 -24.87216 -24.29984 -23.93016 -23.24113 -22.17172 -21.65868 -21.12132 -20.00104 -19.36270 -19.15408 -18.61069 -17.64851 -17.02220 -16.81161 -16.49840 -16.40711 -16.22836 -16.02775 -15.63893 -15.33031 -15.08643 -14.86002 -14.57549 -14.49940 -14.28070 -14.10996 -13.83526 -13.45091 -13.22621 -13.15231 -12.96931 -12.81394 -12.58412 -12.49690 -12.41509 -12.31587 -12.16122 -11.99184 -11.83653 -11.79101 -11.58656 -11.30012 -11.08250 -10.87888 -10.22498 -10.15566 -9.63758 -9.37983 -5.26530 -0.60590 0.26354 0.68371 0.83348 0.99738 1.34006 1.44627 1.78558 1.78886 1.94384 1.96721 2.18467 3.04191 3.09108 3.37219 3.48739 3.55362 3.68448 3.73354 3.82220 3.96028 4.03043 4.09658 4.15357 4.18869 4.22034 4.24247 4.35633 4.40062 4.47342 4.50815 4.58904 4.63072 4.81749 4.83796 4.87845 4.89497 4.90942 4.93302 5.05065 5.08506 5.12971 5.15652 5.35033 5.41401 5.48030 6.05485 6.21740 6.33453 7.08345 7.77880 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 C -0.090 4.090 3 C -0.195 4.195 4 C -0.033 4.033 5 O -0.524 6.524 6 Si 0.659 3.341 7 S 0.204 5.796 8 C -0.265 4.265 9 C 0.596 3.404 10 O -0.526 6.526 11 N -0.724 5.724 12 C 0.145 3.855 13 H 0.092 0.908 14 C -0.128 4.128 15 C -0.114 4.114 16 C -0.004 4.004 17 H 0.111 0.889 18 C 0.186 3.814 19 N -0.291 5.291 20 N -0.296 5.296 21 C 0.154 3.846 22 N -0.581 5.581 23 C -0.106 4.106 24 C -0.127 4.127 25 C -0.046 4.046 26 H 0.071 0.929 27 H 0.078 0.922 28 H 0.060 0.940 29 H 0.088 0.912 30 H 0.382 0.618 31 H -0.242 1.242 32 H -0.242 1.242 33 H 0.399 0.601 34 H 0.073 0.927 35 H 0.076 0.924 36 H 0.075 0.925 37 H 0.065 0.935 38 H 0.222 0.778 39 H 0.429 0.571 40 H 0.081 0.919 41 H 0.067 0.933 42 H 0.078 0.922 43 H 0.077 0.923 44 H 0.155 0.845 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.719 3.059 -0.666 4.146 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.145 4.145 2 C -0.103 4.103 3 C -0.314 4.314 4 C -0.145 4.145 5 O -0.332 6.332 6 Si 0.557 3.443 7 S 0.472 5.528 8 C -0.384 4.384 9 C 0.382 3.618 10 O -0.403 6.403 11 N -0.375 5.375 12 C 0.041 3.959 13 H 0.110 0.890 14 C -0.167 4.167 15 C -0.153 4.153 16 C -0.024 4.024 17 H 0.129 0.871 18 C -0.083 4.083 19 N -0.132 5.132 20 N -0.135 5.135 21 C -0.135 4.135 22 N -0.194 5.194 23 C -0.145 4.145 24 C -0.165 4.165 25 C -0.080 4.080 26 H 0.090 0.910 27 H 0.096 0.904 28 H 0.079 0.921 29 H 0.106 0.894 30 H 0.231 0.769 31 H -0.165 1.165 32 H -0.166 1.166 33 H 0.234 0.766 34 H 0.092 0.908 35 H 0.095 0.905 36 H 0.093 0.907 37 H 0.083 0.917 38 H 0.239 0.761 39 H 0.269 0.731 40 H 0.099 0.901 41 H 0.086 0.914 42 H 0.097 0.903 43 H 0.096 0.904 44 H 0.172 0.828 Dipole moment (debyes) X Y Z Total from point charges 0.152 3.806 -0.200 3.814 hybrid contribution -4.011 -1.143 0.443 4.194 sum -3.859 2.662 0.244 4.694 Atomic orbital electron populations 1.20514 0.88681 1.02495 1.02788 1.18704 0.98548 0.90564 1.02459 1.23282 0.98358 0.98551 1.11239 1.24032 0.91485 0.97565 1.01395 1.86684 1.31717 1.35588 1.79243 0.95547 0.86011 0.78681 0.84100 1.82602 1.02178 0.98603 1.69419 1.24568 0.97934 0.96782 1.19161 1.16921 0.81585 0.87379 0.75916 1.90852 1.81590 1.18162 1.49716 1.45910 1.05270 1.10248 1.76085 1.21069 0.86895 0.91043 0.96912 0.88962 1.21908 0.99178 0.98874 0.96720 1.21602 0.93477 0.98571 1.01678 1.19791 0.90065 0.93931 0.98662 0.87103 1.24863 0.95898 0.84376 1.03156 1.74303 1.02085 1.18253 1.18512 1.74306 1.26767 0.95046 1.17415 1.26583 0.80743 1.02027 1.04183 1.44137 1.11626 1.08376 1.55242 1.21533 0.99434 0.98816 0.94748 1.21829 0.93577 0.98864 1.02201 1.20709 0.90949 1.00084 0.96244 0.90988 0.90368 0.92123 0.89441 0.76933 1.16538 1.16570 0.76629 0.90835 0.90545 0.90653 0.91662 0.76127 0.73118 0.90074 0.91439 0.90338 0.90415 0.82765 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.04 8.70 36.01 0.31 0.27 16 2 C -0.09 -0.12 5.75 -106.45 -0.61 -0.73 16 3 C -0.20 -0.04 5.57 -35.86 -0.20 -0.24 16 4 C -0.03 0.05 2.75 36.01 0.10 0.15 16 5 O -0.52 0.53 9.81 -35.23 -0.35 0.19 16 6 Si 0.66 -1.33 31.31 -169.99 -5.32 -6.65 16 7 S 0.20 -0.29 19.79 -107.50 -2.13 -2.41 16 8 C -0.26 -0.31 6.45 -36.79 -0.24 -0.55 16 9 C 0.60 1.13 7.75 -12.90 -0.10 1.03 16 10 O -0.53 -2.79 16.50 5.18 0.09 -2.70 16 11 N -0.72 0.92 5.07 -55.14 -0.28 0.64 16 12 C 0.14 -0.28 2.45 -67.93 -0.17 -0.45 16 13 H 0.09 -0.03 7.58 -51.93 -0.39 -0.42 16 14 C -0.13 0.28 5.49 -26.73 -0.15 0.13 16 15 C -0.11 0.34 4.97 -26.73 -0.13 0.20 16 16 C 0.00 0.01 2.66 -91.77 -0.24 -0.24 16 17 H 0.11 -0.21 8.14 -51.93 -0.42 -0.64 16 18 C 0.19 0.12 6.99 -154.98 -1.08 -0.97 16 19 N -0.29 -1.37 12.21 32.80 0.40 -0.97 16 20 N -0.30 -1.38 12.21 29.69 0.36 -1.02 16 21 C 0.15 -0.01 13.19 -89.95 -1.19 -1.19 16 22 N -0.58 0.96 5.96 -11.36 -0.07 0.89 16 23 C -0.11 0.30 5.19 -26.71 -0.14 0.16 16 24 C -0.13 0.45 5.39 -26.71 -0.14 0.31 16 25 C -0.05 -0.08 9.80 -40.44 -0.40 -0.48 16 26 H 0.07 0.07 8.14 -51.93 -0.42 -0.35 16 27 H 0.08 0.02 6.41 -51.93 -0.33 -0.31 16 28 H 0.06 -0.01 8.13 -51.93 -0.42 -0.43 16 29 H 0.09 -0.29 7.96 -51.93 -0.41 -0.70 16 30 H 0.38 -1.86 8.74 45.56 0.40 -1.46 16 31 H -0.24 0.12 7.11 56.52 0.40 0.52 16 32 H -0.24 -0.36 7.11 56.52 0.40 0.05 16 33 H 0.40 -1.38 7.72 -40.82 -0.31 -1.69 16 34 H 0.07 -0.20 8.14 -51.93 -0.42 -0.63 16 35 H 0.08 -0.02 8.14 -51.93 -0.42 -0.44 16 36 H 0.07 -0.19 8.14 -51.93 -0.42 -0.61 16 37 H 0.06 -0.23 7.52 -51.93 -0.39 -0.62 16 38 H 0.22 -0.96 8.06 -52.49 -0.42 -1.39 16 39 H 0.43 -2.12 8.29 -40.82 -0.34 -2.46 16 40 H 0.08 -0.15 8.14 -51.93 -0.42 -0.58 16 41 H 0.07 -0.19 8.14 -51.93 -0.42 -0.62 16 42 H 0.08 -0.28 8.14 -51.93 -0.42 -0.70 16 43 H 0.08 -0.35 8.14 -51.93 -0.42 -0.77 16 44 H 0.15 0.25 8.06 -52.49 -0.42 -0.17 16 LS Contribution 371.91 15.07 5.60 5.60 Total: 0.00 -11.35 371.91 -12.12 -23.47 By element: Atomic # 1 Polarization: -8.39 SS G_CDS: -6.06 Total: -14.44 kcal Atomic # 6 Polarization: 1.78 SS G_CDS: -4.38 Total: -2.59 kcal Atomic # 7 Polarization: -0.87 SS G_CDS: 0.42 Total: -0.45 kcal Atomic # 8 Polarization: -2.26 SS G_CDS: -0.26 Total: -2.52 kcal Atomic # 14 Polarization: -1.33 SS G_CDS: -5.32 Total: -6.65 kcal Atomic # 16 Polarization: -0.29 SS G_CDS: -2.13 Total: -2.41 kcal Total LS contribution 5.60 Total: 5.60 kcal Total: -11.35 -12.12 -23.47 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16624780_6739946.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 55.902 kcal (2) G-P(sol) polarization free energy of solvation -11.348 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 44.555 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.118 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.466 kcal (6) G-S(sol) free energy of system = (1) + (5) 32.436 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds