Wall clock time and date at job start Sun Mar 7 2021 05:37:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86299 * 109.47078 * 2 1 4 4 C 1.50709 * 109.47074 * 240.00428 * 2 1 3 5 5 C 1.32770 * 124.71142 * 299.99737 * 4 2 1 6 6 C 1.44426 * 113.08155 * 180.02562 * 5 4 2 7 7 C 1.47191 * 123.45552 * 179.97438 * 6 5 4 8 8 O 1.21636 * 120.00572 * 359.97438 * 7 6 5 9 9 N 1.34777 * 119.99582 * 180.02562 * 7 6 5 10 10 C 1.46505 * 119.99797 * 179.97438 * 9 7 6 11 11 H 1.08992 * 109.47276 * 325.00066 * 10 9 7 12 12 C 1.53002 * 109.46958 * 84.99979 * 10 9 7 13 13 C 1.52997 * 109.46978 * 180.02562 * 12 10 9 14 14 C 1.53006 * 109.47164 * 299.99874 * 13 12 10 15 15 H 1.08998 * 109.46505 * 299.99708 * 14 13 12 16 16 C 1.50697 * 109.47239 * 180.02562 * 14 13 12 17 17 N 1.30518 * 126.34932 * 145.02160 * 16 14 13 18 18 N 1.28595 * 109.67318 * 179.97438 * 17 16 14 19 19 C 1.30519 * 109.67480 * 0.02562 * 18 17 16 20 20 N 1.35485 * 107.30415 * 359.77036 * 19 18 17 21 21 C 1.52997 * 109.47127 * 59.99836 * 14 13 12 22 22 C 1.52996 * 109.46998 * 204.99519 * 10 9 7 23 23 C 1.36005 * 113.07887 * 0.24450 * 6 5 4 24 24 S 1.70443 * 110.81653 * 359.62754 * 23 6 5 25 25 H 0.96699 * 114.00055 * 59.99980 * 1 2 3 26 26 H 1.09000 * 109.47403 * 120.00512 * 2 1 3 27 27 H 1.48494 * 110.00207 * 298.68104 * 3 2 1 28 28 H 1.48502 * 109.99635 * 60.00340 * 3 2 1 29 29 H 1.08005 * 123.45610 * 0.02562 * 5 4 2 30 30 H 0.97001 * 120.00457 * 359.97438 * 9 7 6 31 31 H 1.09002 * 109.47097 * 299.99818 * 12 10 9 32 32 H 1.09001 * 109.47142 * 59.99782 * 12 10 9 33 33 H 1.09001 * 109.47375 * 59.99908 * 13 12 10 34 34 H 1.09000 * 109.47140 * 179.97438 * 13 12 10 35 35 H 1.07996 * 126.34575 * 180.02562 * 19 18 17 36 36 H 0.97007 * 126.98019 * 180.22294 * 20 19 18 37 37 H 1.09002 * 109.47153 * 180.02562 * 21 14 13 38 38 H 1.09001 * 109.46832 * 60.00321 * 21 14 13 39 39 H 1.09004 * 109.47368 * 60.00227 * 22 10 9 40 40 H 1.09001 * 109.47372 * 300.00383 * 22 10 9 41 41 H 1.07996 * 124.59013 * 179.73255 * 23 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2306 5 6 1.6689 -1.9763 -1.5329 6 6 2.2781 -2.4006 -2.7717 7 6 2.1363 -3.7581 -3.3225 8 8 1.4783 -4.5903 -2.7275 9 7 2.7363 -4.0794 -4.4858 10 6 2.5955 -5.4308 -5.0338 11 1 2.5624 -6.1523 -4.2175 12 6 1.3018 -5.5197 -5.8458 13 6 1.1545 -6.9311 -6.4176 14 6 2.3477 -7.2414 -7.3237 15 1 2.3809 -6.5202 -8.1403 16 6 2.2023 -8.6314 -7.8874 17 7 2.5689 -9.0264 -9.0762 18 7 2.2957 -10.2746 -9.2210 19 6 1.7419 -10.7325 -8.1314 20 7 1.6713 -9.7041 -7.2523 21 6 3.6414 -7.1525 -6.5118 22 6 3.7887 -5.7404 -5.9401 23 6 3.0012 -1.4186 -3.3740 24 16 2.9451 0.0206 -2.4627 25 1 -0.3933 0.4417 -0.7650 26 1 1.7924 -0.5139 0.8899 27 1 1.5879 2.4586 -1.2242 28 1 1.5615 2.4678 1.2086 29 1 1.0621 -2.6223 -0.9158 30 1 3.2613 -3.4159 -4.9603 31 1 0.4517 -5.2991 -5.2002 32 1 1.3349 -4.7981 -6.6622 33 1 1.1212 -7.6523 -5.6010 34 1 0.2326 -6.9946 -6.9957 35 1 1.4064 -11.7448 -7.9607 36 1 1.3118 -9.7299 -6.3517 37 1 4.4915 -7.3731 -7.1574 38 1 3.6081 -7.8737 -5.6952 39 1 4.7104 -5.6771 -5.3617 40 1 3.8218 -5.0188 -6.7565 41 1 3.5368 -1.5346 -4.3046 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16624780_6894386.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:37:34 Heat of formation + Delta-G solvation = 33.375574 kcal Electronic energy + Delta-G solvation = -25618.731717 eV Core-core repulsion = 21820.645033 eV Total energy + Delta-G solvation = -3798.086684 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 335.109 amu Computer time = 0.88 seconds Orbital eigenvalues (eV) -44.12147 -41.30326 -39.68766 -38.75862 -37.18612 -35.77876 -34.57865 -32.75178 -32.08241 -31.61878 -29.58974 -27.04111 -25.99595 -24.50093 -24.10441 -23.31475 -22.27662 -21.86518 -21.27398 -20.36931 -19.37209 -19.11606 -18.11774 -17.88971 -17.13831 -16.82507 -16.48842 -16.39321 -16.31550 -15.91739 -15.66587 -15.34173 -15.29205 -14.95000 -14.59273 -14.16362 -14.12080 -13.94060 -13.67020 -13.54871 -13.43847 -12.86947 -12.70760 -12.52105 -12.44375 -12.43876 -12.33169 -11.88175 -11.84878 -11.80843 -11.60643 -11.30426 -10.97351 -10.78931 -10.22719 -10.17246 -10.05506 -9.56926 -5.17496 -0.42731 0.27807 0.62703 0.81689 0.84280 1.13099 1.46269 1.77015 1.81750 1.92791 2.00029 2.30522 3.07052 3.18804 3.35116 3.46052 3.48909 3.67148 3.75662 3.79761 3.88573 3.94848 4.01102 4.13096 4.17126 4.19881 4.22862 4.34016 4.40574 4.45864 4.49184 4.60890 4.65086 4.79767 4.82923 4.88177 4.89131 4.97972 5.05781 5.11242 5.13926 5.16252 5.37178 6.03861 6.24121 6.37559 7.14432 7.76238 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.522 6.522 2 C -0.033 4.033 3 Si 0.650 3.350 4 C -0.242 4.242 5 C -0.054 4.054 6 C -0.157 4.157 7 C 0.580 3.420 8 O -0.531 6.531 9 N -0.723 5.723 10 C 0.145 3.855 11 H 0.091 0.909 12 C -0.128 4.128 13 C -0.115 4.115 14 C -0.003 4.003 15 H 0.110 0.890 16 C 0.186 3.814 17 N -0.291 5.291 18 N -0.296 5.296 19 C 0.154 3.846 20 N -0.581 5.581 21 C -0.106 4.106 22 C -0.126 4.126 23 C -0.206 4.206 24 S 0.200 5.800 25 H 0.378 0.622 26 H 0.128 0.872 27 H -0.239 1.239 28 H -0.234 1.234 29 H 0.156 0.844 30 H 0.399 0.601 31 H 0.075 0.925 32 H 0.071 0.929 33 H 0.065 0.935 34 H 0.074 0.926 35 H 0.223 0.777 36 H 0.429 0.571 37 H 0.080 0.920 38 H 0.067 0.933 39 H 0.077 0.923 40 H 0.076 0.924 41 H 0.171 0.829 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.683 3.371 2.054 4.773 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.329 6.329 2 C -0.145 4.145 3 Si 0.549 3.451 4 C -0.359 4.359 5 C -0.083 4.083 6 C -0.175 4.175 7 C 0.365 3.635 8 O -0.409 6.409 9 N -0.375 5.375 10 C 0.041 3.959 11 H 0.109 0.891 12 C -0.166 4.166 13 C -0.153 4.153 14 C -0.024 4.024 15 H 0.128 0.872 16 C -0.083 4.083 17 N -0.132 5.132 18 N -0.135 5.135 19 C -0.135 4.135 20 N -0.194 5.194 21 C -0.146 4.146 22 C -0.164 4.164 23 C -0.345 4.345 24 S 0.466 5.534 25 H 0.226 0.774 26 H 0.146 0.854 27 H -0.163 1.163 28 H -0.157 1.157 29 H 0.174 0.826 30 H 0.234 0.766 31 H 0.094 0.906 32 H 0.090 0.910 33 H 0.084 0.916 34 H 0.093 0.907 35 H 0.239 0.761 36 H 0.269 0.731 37 H 0.099 0.901 38 H 0.086 0.914 39 H 0.096 0.904 40 H 0.094 0.906 41 H 0.189 0.811 Dipole moment (debyes) X Y Z Total from point charges 3.336 4.757 1.264 5.946 hybrid contribution -2.110 -1.638 1.029 2.862 sum 1.226 3.119 2.293 4.061 Atomic orbital electron populations 1.86646 1.17141 1.79850 1.49240 1.24410 0.83884 1.10014 0.96172 0.95321 0.91661 0.75010 0.83153 1.24758 1.08667 0.99108 1.03334 1.21047 0.98220 0.94379 0.94671 1.20249 1.04496 0.94745 0.98000 1.17617 0.78938 0.86598 0.80301 1.90820 1.40015 1.50283 1.59752 1.45897 1.53708 1.14208 1.23645 1.21043 0.94780 0.83855 0.96271 0.89051 1.21900 0.98309 0.96479 0.99945 1.21601 0.97587 0.97579 0.98572 1.19783 0.96308 0.87724 0.98595 0.87181 1.24856 0.99743 0.92366 0.91371 1.74302 1.19826 1.04910 1.14114 1.74305 1.14788 1.03328 1.21110 1.26585 1.03310 0.96179 0.87425 1.44138 1.48213 1.09647 1.17372 1.21537 0.96822 0.96773 0.99419 1.21820 0.97885 0.97333 0.99338 1.25807 1.04383 0.98947 1.05314 1.83138 1.46359 1.11072 1.12842 0.77413 0.85423 1.16292 1.15678 0.82629 0.76594 0.90608 0.90999 0.91647 0.90689 0.76104 0.73111 0.90106 0.91415 0.90401 0.90582 0.81116 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -0.27 12.85 -35.23 -0.45 -0.72 16 2 C -0.03 0.03 2.95 36.01 0.11 0.14 16 3 Si 0.65 -1.25 30.91 -169.99 -5.25 -6.51 16 4 C -0.24 0.18 5.68 -36.18 -0.21 -0.03 16 5 C -0.05 -0.05 9.91 -39.02 -0.39 -0.44 16 6 C -0.16 -0.04 5.98 -104.63 -0.63 -0.66 16 7 C 0.58 0.84 7.76 -12.62 -0.10 0.74 16 8 O -0.53 -2.79 16.46 5.25 0.09 -2.71 16 9 N -0.72 1.33 5.05 -54.95 -0.28 1.05 16 10 C 0.14 -0.30 2.45 -67.93 -0.17 -0.47 16 11 H 0.09 -0.03 7.58 -51.93 -0.39 -0.42 16 12 C -0.13 0.27 5.49 -26.73 -0.15 0.12 16 13 C -0.11 0.32 4.98 -26.73 -0.13 0.19 16 14 C 0.00 0.01 2.66 -91.77 -0.24 -0.24 16 15 H 0.11 -0.20 8.14 -51.93 -0.42 -0.62 16 16 C 0.19 0.13 6.99 -154.99 -1.08 -0.95 16 17 N -0.29 -1.38 12.21 32.79 0.40 -0.98 16 18 N -0.30 -1.39 12.21 29.68 0.36 -1.02 16 19 C 0.15 0.00 13.19 -89.95 -1.19 -1.19 16 20 N -0.58 0.93 5.96 -11.37 -0.07 0.87 16 21 C -0.11 0.30 5.19 -26.71 -0.14 0.16 16 22 C -0.13 0.47 5.39 -26.71 -0.14 0.32 16 23 C -0.21 0.48 10.38 29.93 0.31 0.79 16 24 S 0.20 -0.48 20.18 -107.50 -2.17 -2.65 16 25 H 0.38 -0.91 8.70 45.56 0.40 -0.51 16 26 H 0.13 -0.23 7.96 -51.93 -0.41 -0.64 16 27 H -0.24 0.10 7.11 56.52 0.40 0.50 16 28 H -0.23 -0.24 7.11 56.52 0.40 0.16 16 29 H 0.16 0.31 8.06 -52.48 -0.42 -0.12 16 30 H 0.40 -1.77 7.10 -40.82 -0.29 -2.06 16 31 H 0.08 0.00 8.14 -51.93 -0.42 -0.43 16 32 H 0.07 -0.19 8.14 -51.93 -0.42 -0.61 16 33 H 0.06 -0.23 7.52 -51.93 -0.39 -0.62 16 34 H 0.07 -0.18 8.14 -51.93 -0.42 -0.60 16 35 H 0.22 -0.96 8.06 -52.49 -0.42 -1.39 16 36 H 0.43 -2.10 8.29 -40.82 -0.34 -2.44 16 37 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 38 H 0.07 -0.19 8.14 -51.93 -0.42 -0.62 16 39 H 0.08 -0.29 8.14 -51.93 -0.42 -0.72 16 40 H 0.08 -0.34 8.14 -51.93 -0.42 -0.76 16 41 H 0.17 -0.91 7.01 -52.49 -0.37 -1.28 16 LS Contribution 354.45 15.07 5.34 5.34 Total: 0.00 -11.19 354.45 -11.39 -22.59 By element: Atomic # 1 Polarization: -8.51 SS G_CDS: -5.22 Total: -13.74 kcal Atomic # 6 Polarization: 2.63 SS G_CDS: -4.14 Total: -1.51 kcal Atomic # 7 Polarization: -0.51 SS G_CDS: 0.42 Total: -0.09 kcal Atomic # 8 Polarization: -3.07 SS G_CDS: -0.37 Total: -3.43 kcal Atomic # 14 Polarization: -1.25 SS G_CDS: -5.25 Total: -6.51 kcal Atomic # 16 Polarization: -0.48 SS G_CDS: -2.17 Total: -2.65 kcal Total LS contribution 5.34 Total: 5.34 kcal Total: -11.19 -11.39 -22.59 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16624780_6894386.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 55.964 kcal (2) G-P(sol) polarization free energy of solvation -11.194 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 44.769 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.394 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.588 kcal (6) G-S(sol) free energy of system = (1) + (5) 33.376 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.88 seconds