Wall clock time and date at job start Sun Mar 7 2021 05:37:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86295 * 109.47242 * 2 1 4 4 C 1.50704 * 109.47078 * 239.99914 * 2 1 3 5 5 C 1.34239 * 126.49967 * 104.97709 * 4 2 1 6 6 N 1.36834 * 109.94055 * 180.02562 * 5 4 2 7 7 C 1.46496 * 125.06306 * 179.97438 * 6 5 4 8 8 C 1.50707 * 109.46882 * 265.02194 * 7 6 5 9 9 O 1.21284 * 119.99933 * 359.97438 * 8 7 6 10 10 N 1.34771 * 120.00104 * 180.02562 * 8 7 6 11 11 C 1.46503 * 120.00228 * 179.97438 * 10 8 7 12 12 H 1.09004 * 109.47013 * 34.99655 * 11 10 8 13 13 C 1.52994 * 109.47370 * 154.99921 * 11 10 8 14 14 C 1.53005 * 109.47181 * 180.02562 * 13 11 10 15 15 C 1.53000 * 109.47004 * 299.99886 * 14 13 11 16 16 H 1.09006 * 109.47265 * 300.00712 * 15 14 13 17 17 C 1.50693 * 109.47445 * 180.02562 * 15 14 13 18 18 N 1.30520 * 126.34765 * 94.95345 * 17 15 14 19 19 N 1.28595 * 109.67181 * 180.02562 * 18 17 15 20 20 C 1.30528 * 109.67405 * 0.02562 * 19 18 17 21 21 N 1.35492 * 107.30462 * 359.97438 * 20 19 18 22 22 C 1.53006 * 109.47143 * 59.99807 * 15 14 13 23 23 C 1.52997 * 109.46805 * 275.00209 * 11 10 8 24 24 C 1.37688 * 109.87134 * 0.22395 * 6 5 4 25 25 C 1.39086 * 133.50933 * 180.39265 * 24 6 5 26 26 C 1.37786 * 119.77994 * 179.65252 * 25 24 6 27 27 C 1.38785 * 120.66745 * 359.75924 * 26 25 24 28 28 C 1.36671 * 120.52751 * 359.97438 * 27 26 25 29 29 C 1.39585 * 119.76126 * 0.02562 * 28 27 26 30 30 H 0.96694 * 114.00412 * 300.00255 * 1 2 3 31 31 H 1.08998 * 109.47520 * 120.00220 * 2 1 3 32 32 H 1.48496 * 110.00217 * 178.67942 * 3 2 1 33 33 H 1.48500 * 110.00043 * 300.00155 * 3 2 1 34 34 H 1.08003 * 125.02946 * 0.02562 * 5 4 2 35 35 H 1.08998 * 109.47320 * 145.02470 * 7 6 5 36 36 H 1.09005 * 109.47494 * 25.01653 * 7 6 5 37 37 H 0.97000 * 120.00242 * 359.97438 * 10 8 7 38 38 H 1.08996 * 109.47200 * 60.00145 * 13 11 10 39 39 H 1.09001 * 109.47305 * 300.00043 * 13 11 10 40 40 H 1.08998 * 109.46961 * 180.02562 * 14 13 11 41 41 H 1.08996 * 109.47106 * 59.99878 * 14 13 11 42 42 H 1.07996 * 126.34178 * 180.02562 * 20 19 18 43 43 H 0.96999 * 126.97720 * 180.26318 * 21 20 19 44 44 H 1.08996 * 109.46969 * 60.00007 * 22 15 14 45 45 H 1.08999 * 109.47183 * 180.02562 * 22 15 14 46 46 H 1.08996 * 109.47125 * 299.99462 * 23 11 10 47 47 H 1.08999 * 109.47583 * 59.99494 * 23 11 10 48 48 H 1.08010 * 120.10793 * 359.41294 * 25 24 6 49 49 H 1.08003 * 119.66583 * 179.73791 * 26 25 24 50 50 H 1.07998 * 119.74168 * 180.02562 * 27 26 25 51 51 H 1.07990 * 120.11616 * 179.97438 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.4604 -0.1376 -2.3232 6 7 2.8020 -1.0989 -3.2350 7 6 3.4058 -0.8402 -4.5445 8 6 2.3252 -0.7836 -5.5935 9 8 1.1651 -0.9441 -5.2783 10 7 2.6481 -0.5557 -6.8819 11 6 1.5978 -0.5012 -7.9018 12 1 0.6999 -0.0540 -7.4751 13 6 2.0771 0.3449 -9.0829 14 6 0.9798 0.4023 -10.1477 15 6 0.6632 -1.0145 -10.6306 16 1 1.5608 -1.4621 -11.0574 17 6 -0.4171 -0.9581 -11.6798 18 7 -0.2391 -0.9282 -12.9724 19 7 -1.3793 -0.8818 -13.5654 20 6 -2.3364 -0.8794 -12.6779 21 7 -1.7531 -0.9280 -11.4559 22 6 0.1839 -1.8607 -9.4493 23 6 1.2817 -1.9182 -8.3844 24 6 2.4887 -2.3453 -2.7408 25 6 2.6278 -3.6360 -3.2399 26 6 2.2140 -4.7106 -2.4832 27 6 1.6632 -4.5193 -1.2237 28 6 1.5222 -3.2601 -0.7116 29 6 1.9348 -2.1571 -1.4611 30 1 -0.3934 0.4417 0.7650 31 1 1.7924 -0.5138 0.8899 32 1 3.5345 1.7702 0.0322 33 1 1.5615 2.4679 -1.2085 34 1 2.5963 0.9248 -2.4620 35 1 4.1055 -1.6402 -4.7864 36 1 3.9368 0.1114 -4.5182 37 1 3.5760 -0.4277 -7.1341 38 1 2.9748 -0.1023 -9.5096 39 1 2.3023 1.3544 -8.7390 40 1 1.3215 1.0047 -10.9894 41 1 0.0823 0.8498 -9.7208 42 1 -3.3967 -0.8458 -12.8802 43 1 -2.2010 -0.9423 -10.5957 44 1 -0.7137 -1.4133 -9.0224 45 1 -0.0413 -2.8702 -9.7933 46 1 2.1794 -2.3654 -8.8111 47 1 0.9402 -2.5210 -7.5430 48 1 3.0552 -3.7952 -4.2189 49 1 2.3190 -5.7118 -2.8743 50 1 1.3443 -5.3724 -0.6433 51 1 1.0924 -3.1189 0.2689 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16624780_9818708.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:37:49 Heat of formation + Delta-G solvation = 76.363018 kcal Electronic energy + Delta-G solvation = -34716.652966 eV Core-core repulsion = 30198.324681 eV Total energy + Delta-G solvation = -4518.328285 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 382.179 amu Computer time = 1.40 seconds Orbital eigenvalues (eV) -44.14884 -42.53568 -41.14600 -39.45726 -37.98281 -37.53087 -35.86436 -34.62547 -34.20881 -32.59647 -32.14414 -31.39211 -30.23227 -29.92886 -28.65383 -25.81247 -24.73997 -24.26571 -23.69398 -23.37583 -22.63340 -22.15223 -21.69447 -21.11287 -20.47572 -19.40781 -18.66427 -18.30989 -18.21368 -17.71105 -17.23697 -16.85688 -16.56434 -16.43069 -16.37926 -16.08244 -15.66525 -15.49515 -15.46499 -15.10113 -14.99154 -14.76234 -14.65865 -14.46824 -14.24050 -14.08308 -13.98604 -13.56107 -13.52266 -13.39411 -12.90126 -12.67471 -12.58908 -12.51356 -12.47904 -12.40116 -12.37666 -11.94133 -11.91964 -11.83983 -11.68286 -11.66958 -11.35140 -11.10990 -10.46864 -10.31738 -10.20623 -10.13368 -9.07030 -8.57963 -5.00129 0.22387 0.75088 0.78809 1.31242 1.33064 1.34097 1.62296 1.71828 1.74415 1.90004 1.98819 2.01672 3.01473 3.06401 3.26451 3.36853 3.43590 3.45533 3.61305 3.63026 3.71577 3.76680 3.77569 3.81120 3.87510 3.95041 4.05931 4.06541 4.10365 4.13758 4.27839 4.29834 4.32444 4.39600 4.41792 4.45088 4.54815 4.66359 4.73497 4.73899 4.76953 4.82106 4.82856 4.86017 4.94712 4.99494 5.04821 5.09071 5.20875 5.23175 5.60106 5.75606 5.81056 5.84902 6.00956 6.08703 6.25007 6.32198 6.79616 6.94529 7.73425 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.545 6.545 2 C -0.033 4.033 3 Si 0.682 3.318 4 C -0.151 4.151 5 C 0.064 3.936 6 N -0.466 5.466 7 C 0.091 3.909 8 C 0.491 3.509 9 O -0.510 6.510 10 N -0.726 5.726 11 C 0.144 3.856 12 H 0.089 0.911 13 C -0.125 4.125 14 C -0.107 4.107 15 C -0.003 4.003 16 H 0.110 0.890 17 C 0.185 3.815 18 N -0.290 5.290 19 N -0.295 5.295 20 C 0.155 3.845 21 N -0.581 5.581 22 C -0.115 4.115 23 C -0.127 4.127 24 C 0.110 3.890 25 C -0.128 4.128 26 C -0.096 4.096 27 C -0.145 4.145 28 C -0.063 4.063 29 C -0.086 4.086 30 H 0.378 0.622 31 H 0.070 0.930 32 H -0.256 1.256 33 H -0.255 1.255 34 H 0.162 0.838 35 H 0.120 0.880 36 H 0.121 0.879 37 H 0.402 0.598 38 H 0.077 0.923 39 H 0.077 0.923 40 H 0.081 0.919 41 H 0.067 0.933 42 H 0.223 0.777 43 H 0.429 0.571 44 H 0.064 0.936 45 H 0.075 0.925 46 H 0.072 0.928 47 H 0.074 0.926 48 H 0.115 0.885 49 H 0.126 0.874 50 H 0.124 0.876 51 H 0.123 0.877 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.319 2.129 4.552 5.534 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.351 6.351 2 C -0.144 4.144 3 Si 0.584 3.416 4 C -0.158 4.158 5 C -0.061 4.061 6 N -0.149 5.149 7 C -0.035 4.035 8 C 0.275 3.725 9 O -0.384 6.384 10 N -0.378 5.378 11 C 0.040 3.960 12 H 0.108 0.892 13 C -0.163 4.163 14 C -0.146 4.146 15 C -0.024 4.024 16 H 0.128 0.872 17 C -0.084 4.084 18 N -0.131 5.131 19 N -0.135 5.135 20 C -0.134 4.134 21 N -0.194 5.194 22 C -0.154 4.154 23 C -0.165 4.165 24 C 0.006 3.994 25 C -0.148 4.148 26 C -0.115 4.115 27 C -0.164 4.164 28 C -0.082 4.082 29 C -0.090 4.090 30 H 0.224 0.776 31 H 0.088 0.912 32 H -0.180 1.180 33 H -0.179 1.179 34 H 0.179 0.821 35 H 0.137 0.863 36 H 0.139 0.861 37 H 0.237 0.763 38 H 0.095 0.905 39 H 0.095 0.905 40 H 0.100 0.900 41 H 0.085 0.915 42 H 0.239 0.761 43 H 0.269 0.731 44 H 0.083 0.917 45 H 0.094 0.906 46 H 0.091 0.909 47 H 0.093 0.907 48 H 0.133 0.867 49 H 0.144 0.856 50 H 0.142 0.858 51 H 0.141 0.859 Dipole moment (debyes) X Y Z Total from point charges 2.944 2.408 1.989 4.292 hybrid contribution -0.594 -0.437 1.095 1.320 sum 2.350 1.970 3.084 4.349 Atomic orbital electron populations 1.86568 1.17606 1.81661 1.49260 1.23937 0.85269 1.09035 0.96165 0.95257 0.80754 0.77832 0.87804 1.19537 1.08366 0.91751 0.96146 1.21399 1.01990 0.93535 0.89131 1.43156 1.53922 1.04629 1.13199 1.21601 0.94657 1.05958 0.81329 1.21000 0.90799 0.77168 0.83526 1.90825 1.19835 1.46936 1.80779 1.46016 1.11074 1.73937 1.06821 1.21054 0.91458 0.95998 0.87484 0.89246 1.21802 0.99155 1.00666 0.94666 1.21531 0.99099 0.95193 0.98769 1.19774 0.94361 0.97596 0.90637 0.87153 1.24834 0.84085 1.03959 0.95521 1.74303 1.18275 1.18313 1.02217 1.74310 0.94674 1.17681 1.26832 1.26596 1.02019 1.04362 0.80457 1.44141 1.07683 1.56497 1.11054 1.21608 0.98791 1.00470 0.94487 1.21892 0.99075 0.96935 0.98631 1.18162 1.01389 0.85814 0.94080 1.19949 1.05360 0.89142 1.00362 1.20830 0.98272 0.97938 0.94446 1.20675 1.02419 0.96915 0.96438 1.20285 0.97745 0.90849 0.99278 1.18928 1.03318 0.92588 0.94133 0.77552 0.91224 1.18039 1.17928 0.82107 0.86259 0.86114 0.76317 0.90479 0.90480 0.90045 0.91466 0.76077 0.73115 0.91689 0.90624 0.90928 0.90736 0.86687 0.85632 0.85796 0.85874 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -1.11 12.86 -35.23 -0.45 -1.56 16 2 C -0.03 -0.05 3.05 36.01 0.11 0.06 16 3 Si 0.68 -0.45 30.79 -169.99 -5.23 -5.68 16 4 C -0.15 -0.64 5.61 -102.71 -0.58 -1.22 16 5 C 0.06 0.21 9.89 -16.73 -0.17 0.05 16 6 N -0.47 -1.20 2.27 -115.71 -0.26 -1.47 16 7 C 0.09 -0.15 6.48 -5.19 -0.03 -0.19 16 8 C 0.49 0.11 7.86 -10.98 -0.09 0.02 16 9 O -0.51 -2.75 16.08 5.55 0.09 -2.66 16 10 N -0.73 2.18 5.08 -53.81 -0.27 1.91 16 11 C 0.14 -0.35 2.45 -67.93 -0.17 -0.52 16 12 H 0.09 -0.01 7.58 -51.93 -0.39 -0.40 16 13 C -0.12 0.49 5.39 -26.73 -0.14 0.35 16 14 C -0.11 0.30 5.19 -26.73 -0.14 0.16 16 15 C 0.00 0.01 2.66 -91.77 -0.24 -0.24 16 16 H 0.11 -0.20 8.14 -51.93 -0.42 -0.63 16 17 C 0.19 0.14 6.99 -154.99 -1.08 -0.94 16 18 N -0.29 -1.40 12.21 32.79 0.40 -1.00 16 19 N -0.30 -1.41 12.21 29.69 0.36 -1.05 16 20 C 0.15 0.01 13.19 -89.94 -1.19 -1.17 16 21 N -0.58 0.84 5.96 -11.36 -0.07 0.77 16 22 C -0.11 0.31 4.97 -26.70 -0.13 0.18 16 23 C -0.13 0.29 5.50 -26.70 -0.15 0.14 16 24 C 0.11 0.47 6.80 -83.99 -0.57 -0.10 16 25 C -0.13 -0.36 10.00 -39.43 -0.39 -0.76 16 26 C -0.10 -0.22 10.01 -39.54 -0.40 -0.61 16 27 C -0.15 -0.38 9.97 -39.95 -0.40 -0.78 16 28 C -0.06 -0.24 10.05 -39.65 -0.40 -0.64 16 29 C -0.09 -0.44 6.35 -105.14 -0.67 -1.11 16 30 H 0.38 -1.29 8.74 45.56 0.40 -0.89 16 31 H 0.07 0.00 7.96 -51.93 -0.41 -0.42 16 32 H -0.26 -0.38 7.11 56.52 0.40 0.02 16 33 H -0.25 -0.55 7.04 56.52 0.40 -0.16 16 34 H 0.16 0.23 6.30 -52.48 -0.33 -0.11 16 35 H 0.12 -0.49 8.14 -51.93 -0.42 -0.92 16 36 H 0.12 -0.56 8.12 -51.93 -0.42 -0.99 16 37 H 0.40 -2.44 8.60 -40.82 -0.35 -2.79 16 38 H 0.08 -0.37 8.14 -51.93 -0.42 -0.79 16 39 H 0.08 -0.31 8.14 -51.93 -0.42 -0.73 16 40 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 41 H 0.07 -0.18 8.14 -51.93 -0.42 -0.60 16 42 H 0.22 -0.93 8.06 -52.49 -0.42 -1.36 16 43 H 0.43 -1.99 8.28 -40.82 -0.34 -2.32 16 44 H 0.06 -0.20 7.52 -51.93 -0.39 -0.59 16 45 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 46 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 47 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 48 H 0.12 0.08 8.06 -52.48 -0.42 -0.34 16 49 H 0.13 -0.01 8.06 -52.48 -0.42 -0.43 16 50 H 0.12 0.05 8.06 -52.49 -0.42 -0.37 16 51 H 0.12 0.29 8.06 -52.49 -0.42 -0.13 16 LS Contribution 420.69 15.07 6.34 6.34 Total: 0.00 -15.60 420.69 -13.28 -28.88 By element: Atomic # 1 Polarization: -9.81 SS G_CDS: -7.36 Total: -17.17 kcal Atomic # 6 Polarization: -0.49 SS G_CDS: -6.82 Total: -7.31 kcal Atomic # 7 Polarization: -1.00 SS G_CDS: 0.16 Total: -0.84 kcal Atomic # 8 Polarization: -3.86 SS G_CDS: -0.36 Total: -4.22 kcal Atomic # 14 Polarization: -0.45 SS G_CDS: -5.23 Total: -5.68 kcal Total LS contribution 6.34 Total: 6.34 kcal Total: -15.60 -13.28 -28.88 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16624780_9818708.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 105.239 kcal (2) G-P(sol) polarization free energy of solvation -15.598 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 89.642 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.279 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.876 kcal (6) G-S(sol) free energy of system = (1) + (5) 76.363 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.40 seconds