Wall clock time and date at job start Sun Mar 7 2021 05:37:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.36764 * 125.80408 * 2 1 4 4 C 1.47267 * 126.94108 * 359.94009 * 3 2 1 5 5 O 1.21619 * 119.99910 * 0.02562 * 4 3 2 6 6 N 1.34781 * 119.99852 * 180.02562 * 4 3 2 7 7 C 1.46495 * 119.99770 * 180.02562 * 6 4 3 8 8 H 1.08994 * 109.47465 * 324.99641 * 7 6 4 9 9 C 1.52998 * 109.47289 * 85.00118 * 7 6 4 10 10 C 1.53000 * 109.47222 * 180.02562 * 9 7 6 11 11 C 1.52998 * 109.46802 * 299.99784 * 10 9 7 12 12 H 1.09004 * 109.47021 * 299.99373 * 11 10 9 13 13 C 1.50704 * 109.47034 * 180.02562 * 11 10 9 14 14 N 1.30523 * 126.34835 * 145.02297 * 13 11 10 15 15 N 1.28592 * 109.67062 * 179.97438 * 14 13 11 16 16 C 1.30524 * 109.67571 * 359.97438 * 15 14 13 17 17 N 1.35485 * 107.30675 * 359.97438 * 16 15 14 18 18 C 1.52998 * 109.47362 * 59.99886 * 11 10 9 19 19 C 1.52998 * 109.46799 * 204.99941 * 7 6 4 20 20 C 1.46688 * 106.11629 * 180.20992 * 3 2 1 21 21 C 1.34487 * 106.33031 * 359.61952 * 20 3 2 22 22 C 1.50700 * 125.57058 * 180.16187 * 21 20 3 23 23 O 1.42903 * 109.47094 * 65.28139 * 22 21 20 24 24 Si 1.86298 * 109.47224 * 185.27847 * 22 21 20 25 25 N 1.34667 * 125.79827 * 179.97438 * 2 1 3 26 26 H 1.08994 * 109.47175 * 90.00205 * 1 2 3 27 27 H 1.09000 * 109.46896 * 210.00167 * 1 2 3 28 28 H 1.09006 * 109.46534 * 329.99990 * 1 2 3 29 29 H 0.97004 * 120.00193 * 359.97438 * 6 4 3 30 30 H 1.09004 * 109.47043 * 299.99888 * 9 7 6 31 31 H 1.08998 * 109.47707 * 59.99217 * 9 7 6 32 32 H 1.09000 * 109.46963 * 179.97438 * 10 9 7 33 33 H 1.09003 * 109.47404 * 59.99763 * 10 9 7 34 34 H 1.07998 * 126.34341 * 179.97438 * 16 15 14 35 35 H 0.96997 * 126.98100 * 180.02562 * 17 16 15 36 36 H 1.09003 * 109.46785 * 60.00057 * 18 11 10 37 37 H 1.08999 * 109.46922 * 179.97438 * 18 11 10 38 38 H 1.08991 * 109.47416 * 59.99921 * 19 7 6 39 39 H 1.09004 * 109.47021 * 299.99292 * 19 7 6 40 40 H 1.08003 * 126.83508 * 179.75065 * 20 3 2 41 41 H 1.09004 * 109.47548 * 305.27863 * 22 21 20 42 42 H 0.96698 * 114.00358 * 59.99341 * 23 22 21 43 43 H 1.48505 * 110.00050 * 180.02562 * 24 22 21 44 44 H 1.48497 * 109.99951 * 301.32182 * 24 22 21 45 45 H 0.96996 * 124.84842 * 0.02562 * 25 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3071 1.1092 0.0000 4 6 1.8703 2.5156 -0.0012 5 8 0.6841 2.7839 -0.0019 6 7 2.7851 3.5054 -0.0016 7 6 2.3506 4.9044 -0.0022 8 1 1.4390 5.0015 -0.5918 9 6 2.0791 5.3548 1.4345 10 6 1.6247 6.8158 1.4338 11 6 2.7215 7.6907 0.8236 12 1 3.6333 7.5941 1.4132 13 6 2.2742 9.1298 0.8234 14 7 3.0333 10.1759 1.0051 15 7 2.3207 11.2443 0.9406 16 6 1.0746 10.9285 0.7143 17 7 1.0097 9.5776 0.6326 18 6 2.9931 7.2403 -0.6131 19 6 3.4479 5.7789 -0.6121 20 6 3.6882 0.6150 -0.0052 21 6 3.6095 -0.7275 0.0008 22 6 4.7819 -1.6744 0.0020 23 8 5.5094 -1.5302 1.2235 24 14 4.1657 -3.4259 -0.1506 25 7 2.2947 -1.0923 0.0005 26 1 -0.3633 0.0000 -1.0276 27 1 -0.3633 -0.8900 0.5139 28 1 -0.3632 0.8901 0.5139 29 1 3.7313 3.2914 -0.0006 30 1 1.2974 4.7317 1.8691 31 1 2.9907 5.2577 2.0242 32 1 1.4308 7.1365 2.4573 33 1 0.7129 6.9124 0.8443 34 1 0.2485 11.6164 0.6113 35 1 0.2186 9.0402 0.4709 36 1 2.0813 7.3369 -1.2026 37 1 3.7742 7.8639 -1.0478 38 1 3.6413 5.4580 -1.6356 39 1 4.3595 5.6819 -0.0224 40 1 4.5891 1.2108 -0.0103 41 1 5.4355 -1.4446 -0.8395 42 1 4.9888 -1.7195 2.0161 43 1 5.3123 -4.3696 -0.1500 44 1 3.2483 -3.7413 0.9736 45 1 1.9733 -2.0074 0.0005 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16624780_9865296.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 05:37:53 Heat of formation + Delta-G solvation = 41.542662 kcal Electronic energy + Delta-G solvation = -28092.049945 eV Core-core repulsion = 24112.427776 eV Total energy + Delta-G solvation = -3979.622168 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 332.164 amu Computer time = 0.85 seconds Orbital eigenvalues (eV) -44.07500 -42.53391 -40.72167 -39.05139 -37.97628 -35.60359 -34.51568 -32.88220 -32.77560 -31.98269 -31.75893 -29.57173 -28.93184 -25.83141 -24.72626 -24.13540 -23.51616 -22.85968 -22.02192 -21.55299 -21.20960 -20.31728 -19.31928 -18.82764 -17.79969 -17.47515 -16.83741 -16.74986 -16.65204 -16.34002 -16.11434 -15.84585 -15.47399 -15.36533 -15.05993 -14.83918 -14.60086 -14.51905 -14.09882 -14.02364 -13.85028 -13.69813 -13.45598 -13.37049 -12.83959 -12.74572 -12.67978 -12.42268 -12.34520 -12.25340 -12.22850 -11.77239 -11.73691 -11.50812 -11.24596 -10.95110 -10.58890 -10.13473 -10.05290 -9.84106 -9.19789 -5.27020 0.74163 0.86274 0.96012 1.20751 1.26268 1.66853 1.81729 1.94826 1.97218 2.37800 2.62966 3.14578 3.16086 3.45262 3.55025 3.57068 3.77703 3.78752 3.83928 4.01140 4.07670 4.12196 4.15064 4.24356 4.27541 4.30237 4.36322 4.40293 4.45138 4.52799 4.58345 4.64967 4.69912 4.72413 4.89467 4.91457 4.95500 4.97879 5.00046 5.14489 5.16534 5.20786 5.26946 5.59093 5.67185 5.81929 6.08365 6.20257 6.28270 6.67777 7.44537 7.80676 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.099 4.099 2 C 0.124 3.876 3 C -0.242 4.242 4 C 0.595 3.405 5 O -0.549 6.549 6 N -0.724 5.724 7 C 0.147 3.853 8 H 0.089 0.911 9 C -0.127 4.127 10 C -0.114 4.114 11 C -0.004 4.004 12 H 0.110 0.890 13 C 0.187 3.813 14 N -0.292 5.292 15 N -0.296 5.296 16 C 0.153 3.847 17 N -0.581 5.581 18 C -0.106 4.106 19 C -0.126 4.126 20 C -0.127 4.127 21 C -0.027 4.027 22 C -0.040 4.040 23 O -0.522 6.522 24 Si 0.670 3.330 25 N -0.546 5.546 26 H 0.082 0.918 27 H 0.065 0.935 28 H 0.103 0.897 29 H 0.401 0.599 30 H 0.075 0.925 31 H 0.070 0.930 32 H 0.073 0.927 33 H 0.064 0.936 34 H 0.222 0.778 35 H 0.429 0.571 36 H 0.066 0.934 37 H 0.079 0.921 38 H 0.077 0.923 39 H 0.075 0.925 40 H 0.147 0.853 41 H 0.130 0.870 42 H 0.377 0.623 43 H -0.245 1.245 44 H -0.256 1.256 45 H 0.414 0.586 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.183 -5.738 -2.480 7.015 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.157 4.157 2 C 0.005 3.995 3 C -0.251 4.251 4 C 0.385 3.615 5 O -0.428 6.428 6 N -0.375 5.375 7 C 0.042 3.958 8 H 0.107 0.893 9 C -0.166 4.166 10 C -0.153 4.153 11 C -0.024 4.024 12 H 0.128 0.872 13 C -0.082 4.082 14 N -0.132 5.132 15 N -0.136 5.136 16 C -0.136 4.136 17 N -0.194 5.194 18 C -0.145 4.145 19 C -0.164 4.164 20 C -0.152 4.152 21 C -0.135 4.135 22 C -0.151 4.151 23 O -0.328 6.328 24 Si 0.570 3.430 25 N -0.145 5.145 26 H 0.101 0.899 27 H 0.084 0.916 28 H 0.122 0.878 29 H 0.235 0.765 30 H 0.093 0.907 31 H 0.089 0.911 32 H 0.092 0.908 33 H 0.083 0.917 34 H 0.239 0.761 35 H 0.269 0.731 36 H 0.085 0.915 37 H 0.098 0.902 38 H 0.095 0.905 39 H 0.094 0.906 40 H 0.165 0.835 41 H 0.148 0.852 42 H 0.225 0.775 43 H -0.169 1.169 44 H -0.181 1.181 45 H 0.252 0.748 Dipole moment (debyes) X Y Z Total from point charges -2.203 -5.356 -2.238 6.208 hybrid contribution -1.133 -1.050 0.835 1.756 sum -3.335 -6.405 -1.403 7.357 Atomic orbital electron populations 1.20652 0.86577 1.04495 1.03933 1.20410 0.93773 0.85282 1.00003 1.20108 0.93033 0.92047 1.19957 1.17307 0.85240 0.84019 0.74959 1.90742 1.16595 1.84374 1.51118 1.45812 1.09880 1.05514 1.76270 1.20965 0.98504 0.79881 0.96449 0.89268 1.21900 1.02527 0.95079 0.97072 1.21599 0.97383 0.94813 1.01504 1.19794 1.00371 0.83558 0.98719 0.87207 1.24889 0.81541 0.98710 1.03072 1.74304 1.26160 0.94132 1.18618 1.74302 1.00709 1.21132 1.17421 1.26576 0.99648 0.83158 1.04225 1.44134 1.11285 1.08739 1.55211 1.21533 1.02540 0.95792 0.94649 1.21815 0.98403 0.94053 1.02122 1.21804 0.95686 0.92570 1.05101 1.20470 0.84313 0.95657 1.13057 1.24380 0.93383 1.06965 0.90421 1.86660 1.40130 1.90801 1.15205 0.95551 0.83415 0.75112 0.88964 1.41744 1.05611 1.08514 1.58642 0.89912 0.91580 0.87826 0.76495 0.90669 0.91102 0.90838 0.91718 0.76138 0.73122 0.91493 0.90233 0.90463 0.90642 0.83536 0.85236 0.77494 1.16908 1.18122 0.74753 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.09 9.88 36.01 0.36 0.44 16 2 C 0.12 0.02 7.17 -81.88 -0.59 -0.57 16 3 C -0.24 -0.28 6.29 -103.35 -0.65 -0.93 16 4 C 0.60 1.22 7.77 -12.59 -0.10 1.12 16 5 O -0.55 -2.59 14.48 5.26 0.08 -2.51 16 6 N -0.72 0.49 5.07 -54.94 -0.28 0.22 16 7 C 0.15 -0.20 2.45 -67.93 -0.17 -0.36 16 8 H 0.09 0.02 7.58 -51.93 -0.39 -0.37 16 9 C -0.13 0.19 5.49 -26.73 -0.15 0.04 16 10 C -0.11 0.27 4.97 -26.73 -0.13 0.13 16 11 C 0.00 0.01 2.66 -91.77 -0.24 -0.24 16 12 H 0.11 -0.12 8.14 -51.93 -0.42 -0.55 16 13 C 0.19 0.21 6.99 -154.98 -1.08 -0.88 16 14 N -0.29 -1.50 12.21 32.80 0.40 -1.10 16 15 N -0.30 -1.48 12.21 29.69 0.36 -1.12 16 16 C 0.15 0.04 13.19 -89.95 -1.19 -1.15 16 17 N -0.58 0.76 5.96 -11.36 -0.07 0.69 16 18 C -0.11 0.23 5.19 -26.71 -0.14 0.09 16 19 C -0.13 0.35 5.39 -26.71 -0.14 0.21 16 20 C -0.13 0.03 10.45 -37.50 -0.39 -0.36 16 21 C -0.03 0.03 6.09 -81.87 -0.50 -0.47 16 22 C -0.04 0.08 2.98 36.01 0.11 0.19 16 23 O -0.52 0.23 12.88 -35.23 -0.45 -0.22 16 24 Si 0.67 -1.99 30.96 -169.99 -5.26 -7.25 16 25 N -0.55 0.93 5.41 -5.42 -0.03 0.90 16 26 H 0.08 -0.11 8.14 -51.93 -0.42 -0.54 16 27 H 0.07 -0.18 8.14 -51.93 -0.42 -0.60 16 28 H 0.10 0.11 6.47 -51.93 -0.34 -0.23 16 29 H 0.40 -1.00 7.73 -40.82 -0.32 -1.32 16 30 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 31 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 32 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 33 H 0.06 -0.20 7.52 -51.93 -0.39 -0.59 16 34 H 0.22 -0.91 8.06 -52.49 -0.42 -1.34 16 35 H 0.43 -1.99 8.29 -40.82 -0.34 -2.33 16 36 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 37 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 38 H 0.08 -0.21 8.14 -51.93 -0.42 -0.64 16 39 H 0.07 -0.25 8.14 -51.93 -0.42 -0.68 16 40 H 0.15 -0.25 7.70 -52.48 -0.40 -0.66 16 41 H 0.13 -0.38 7.96 -51.93 -0.41 -0.79 16 42 H 0.38 -1.13 8.70 45.56 0.40 -0.74 16 43 H -0.25 -0.14 7.11 56.52 0.40 0.26 16 44 H -0.26 0.33 7.11 56.52 0.40 0.73 16 45 H 0.41 -1.65 6.72 -40.82 -0.27 -1.92 16 LS Contribution 368.50 15.07 5.55 5.55 Total: 0.00 -11.43 368.50 -11.02 -22.45 By element: Atomic # 1 Polarization: -8.57 SS G_CDS: -6.32 Total: -14.89 kcal Atomic # 6 Polarization: 2.28 SS G_CDS: -5.00 Total: -2.72 kcal Atomic # 7 Polarization: -0.79 SS G_CDS: 0.39 Total: -0.41 kcal Atomic # 8 Polarization: -2.35 SS G_CDS: -0.38 Total: -2.73 kcal Atomic # 14 Polarization: -1.99 SS G_CDS: -5.26 Total: -7.25 kcal Total LS contribution 5.55 Total: 5.55 kcal Total: -11.43 -11.02 -22.45 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16624780_9865296.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 63.989 kcal (2) G-P(sol) polarization free energy of solvation -11.425 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 52.564 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.021 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.446 kcal (6) G-S(sol) free energy of system = (1) + (5) 41.543 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds