Wall clock time and date at job start Sun Mar 7 2021 08:06:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45201 * 1 3 3 C 1.34231 * 117.00304 * 2 1 4 4 O 1.20824 * 119.99629 * 0.02562 * 3 2 1 5 5 C 1.50698 * 120.00082 * 180.02562 * 3 2 1 6 6 C 1.52997 * 109.46976 * 180.02562 * 5 3 2 7 7 H 1.08994 * 112.91116 * 43.74893 * 6 5 3 8 8 C 1.53787 * 113.61251 * 175.00203 * 6 5 3 9 9 C 1.53779 * 87.07963 * 139.97890 * 8 6 5 10 10 H 1.08999 * 113.61062 * 219.93155 * 9 8 6 11 11 N 1.46502 * 113.61301 * 89.11687 * 9 8 6 12 12 C 1.34783 * 119.99683 * 154.99921 * 11 9 8 13 13 O 1.21565 * 119.99955 * 359.97438 * 12 11 9 14 14 C 1.47693 * 119.99536 * 179.97438 * 12 11 9 15 15 C 1.39824 * 120.16352 * 179.72328 * 14 12 11 16 16 F 1.35104 * 120.11085 * 359.97438 * 15 14 12 17 17 C 1.38328 * 119.78024 * 179.79383 * 15 14 12 18 18 C 1.38204 * 120.11344 * 0.48159 * 17 15 14 19 19 C 1.38461 * 120.33852 * 359.74619 * 18 17 15 20 20 C 1.50705 * 119.89016 * 180.02562 * 19 18 17 21 21 O 1.42892 * 109.47352 * 120.02167 * 20 19 18 22 22 Si 1.86308 * 109.46830 * 0.02562 * 20 19 18 23 23 C 1.37854 * 120.22328 * 0.02562 * 19 18 17 24 24 C 1.53779 * 87.08402 * 334.56577 * 9 8 6 25 25 H 1.09008 * 109.46851 * 59.99778 * 1 2 3 26 26 H 1.08996 * 109.47256 * 179.97438 * 1 2 3 27 27 H 1.08997 * 109.46932 * 300.00239 * 1 2 3 28 28 H 1.08998 * 109.46935 * 59.99971 * 5 3 2 29 29 H 1.09003 * 109.46788 * 300.00068 * 5 3 2 30 30 H 1.08997 * 113.61028 * 254.52850 * 8 6 5 31 31 H 1.08998 * 113.61447 * 25.34385 * 8 6 5 32 32 H 0.96996 * 120.00397 * 334.99617 * 11 9 8 33 33 H 1.07996 * 119.93893 * 180.23010 * 17 15 14 34 34 H 1.07999 * 119.83032 * 179.72504 * 18 17 15 35 35 H 1.09005 * 109.46904 * 240.02422 * 20 19 18 36 36 H 0.96703 * 114.00149 * 299.99929 * 21 20 19 37 37 H 1.48500 * 109.99788 * 180.02562 * 22 20 19 38 38 H 1.48498 * 110.00245 * 301.32233 * 22 20 19 39 39 H 1.07994 * 120.06514 * 179.97438 * 23 19 18 40 40 H 1.09002 * 113.61557 * 270.88569 * 24 9 8 41 41 H 1.09004 * 113.61501 * 139.97990 * 24 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0615 1.1960 0.0000 4 8 1.4034 2.2093 0.0005 5 6 3.5664 1.2748 -0.0006 6 6 4.0002 2.7420 0.0002 7 1 3.4253 3.3541 0.6951 8 6 5.5211 2.9346 0.1224 9 6 5.3812 4.0675 -0.9079 10 1 6.1877 4.0933 -1.6407 11 7 5.1159 5.3773 -0.3076 12 6 5.4577 6.5023 -0.9665 13 8 5.9865 6.4301 -2.0588 14 6 5.1898 7.8227 -0.3615 15 6 5.5481 8.9919 -1.0395 16 9 6.1416 8.9181 -2.2509 17 6 5.2896 10.2245 -0.4673 18 6 4.6881 10.3000 0.7747 19 6 4.3356 9.1452 1.4524 20 6 3.6797 9.2393 2.8060 21 8 2.3941 8.6175 2.7566 22 14 3.4852 11.0309 3.2785 23 6 4.5825 7.9096 0.8931 24 6 4.1154 3.3510 -1.4072 25 1 -0.3633 0.5139 -0.8900 26 1 -0.3633 -1.0276 -0.0005 27 1 -0.3633 0.5139 0.8899 28 1 3.9557 0.7808 -0.8908 29 1 3.9564 0.7804 0.8892 30 1 5.8400 3.2766 1.1069 31 1 6.0993 2.0837 -0.2379 32 1 4.6943 5.4349 0.5641 33 1 5.5619 11.1292 -0.9904 34 1 4.4924 11.2647 1.2191 35 1 4.2998 8.7335 3.5461 36 1 1.7882 9.0171 2.1176 37 1 2.8401 11.1373 4.6118 38 1 4.8123 11.6969 3.3022 39 1 4.3068 7.0105 1.4242 40 1 4.3094 2.6146 -2.1871 41 1 3.2997 4.0293 -1.6576 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16627170_12335834.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:06:40 Heat of formation + Delta-G solvation = -138.899352 kcal Electronic energy + Delta-G solvation = -27144.322943 eV Core-core repulsion = 22906.600503 eV Total energy + Delta-G solvation = -4237.722440 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 324.125 amu Computer time = 0.54 seconds Orbital eigenvalues (eV) -49.84553 -41.80595 -41.27061 -40.40168 -39.18645 -37.57894 -37.38067 -34.81539 -32.83469 -32.36060 -31.33496 -28.47476 -26.81610 -26.73831 -25.84341 -24.55282 -23.16438 -21.85746 -21.68313 -20.29814 -19.27023 -18.53391 -18.35882 -18.33995 -17.66873 -17.48518 -17.35738 -16.85372 -16.75577 -16.32962 -16.02215 -15.84109 -15.76719 -15.52729 -15.16820 -14.88322 -14.72787 -14.46737 -14.34659 -14.07289 -13.77888 -13.67809 -13.43917 -13.23527 -13.00570 -12.90187 -12.77746 -12.26711 -12.20133 -11.94422 -11.77451 -11.70271 -11.36306 -11.32507 -11.04815 -10.60073 -10.42079 -10.09243 -9.83177 -5.17432 -0.51447 -0.10380 1.12244 1.24012 1.48577 1.65788 1.73658 1.84837 1.95136 2.47906 3.01847 3.22328 3.32409 3.35838 3.37256 3.44041 3.53680 3.63994 3.75171 3.85995 3.87643 4.00410 4.16889 4.23146 4.27314 4.28110 4.31822 4.41211 4.45082 4.58363 4.62073 4.64384 4.65272 4.70305 4.81528 4.85715 4.97815 5.02222 5.03607 5.10372 5.43182 5.51060 5.54894 6.37614 6.40643 6.77041 7.13500 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.362 6.362 3 C 0.458 3.542 4 O -0.504 6.504 5 C -0.105 4.105 6 C -0.103 4.103 7 H 0.102 0.898 8 C -0.139 4.139 9 C 0.121 3.879 10 H 0.108 0.892 11 N -0.707 5.707 12 C 0.562 3.438 13 O -0.518 6.518 14 C -0.175 4.175 15 C 0.167 3.833 16 F -0.111 7.111 17 C -0.156 4.156 18 C -0.060 4.060 19 C -0.141 4.141 20 C -0.067 4.067 21 O -0.538 6.538 22 Si 0.689 3.311 23 C -0.031 4.031 24 C -0.146 4.146 25 H 0.063 0.937 26 H 0.102 0.898 27 H 0.063 0.937 28 H 0.109 0.891 29 H 0.109 0.891 30 H 0.078 0.922 31 H 0.102 0.898 32 H 0.401 0.599 33 H 0.150 0.850 34 H 0.142 0.858 35 H 0.118 0.882 36 H 0.381 0.619 37 H -0.252 1.252 38 H -0.255 1.255 39 H 0.139 0.861 40 H 0.093 0.907 41 H 0.076 0.924 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.775 -0.432 3.049 3.554 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.279 6.279 3 C 0.301 3.699 4 O -0.391 6.391 5 C -0.143 4.143 6 C -0.122 4.122 7 H 0.120 0.880 8 C -0.177 4.177 9 C 0.015 3.985 10 H 0.126 0.874 11 N -0.359 5.359 12 C 0.349 3.651 13 O -0.394 6.394 14 C -0.179 4.179 15 C 0.147 3.853 16 F -0.089 7.089 17 C -0.175 4.175 18 C -0.078 4.078 19 C -0.141 4.141 20 C -0.178 4.178 21 O -0.344 6.344 22 Si 0.590 3.410 23 C -0.049 4.049 24 C -0.185 4.185 25 H 0.082 0.918 26 H 0.121 0.879 27 H 0.082 0.918 28 H 0.128 0.872 29 H 0.127 0.873 30 H 0.097 0.903 31 H 0.120 0.880 32 H 0.237 0.763 33 H 0.168 0.832 34 H 0.159 0.841 35 H 0.135 0.865 36 H 0.229 0.771 37 H -0.176 1.176 38 H -0.180 1.180 39 H 0.157 0.843 40 H 0.112 0.888 41 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges -1.122 0.048 3.240 3.429 hybrid contribution -0.057 -0.529 0.227 0.579 sum -1.178 -0.481 3.467 3.693 Atomic orbital electron populations 1.23296 0.75978 1.03915 1.02677 1.86510 1.23762 1.33564 1.84067 1.23841 0.92321 0.81377 0.72332 1.90687 1.67250 1.36319 1.44891 1.21448 0.87554 0.99080 1.06173 1.22540 0.96283 0.94050 0.99277 0.87968 1.23409 0.95670 0.98588 1.00063 1.21816 0.98814 0.81276 0.96552 0.87362 1.45527 1.62945 1.04959 1.22506 1.17957 0.78481 0.83667 0.84991 1.90870 1.41787 1.87070 1.19703 1.20056 1.07439 0.92979 0.97384 1.17752 0.93158 0.93049 0.81388 1.91633 1.79916 1.97014 1.40290 1.21172 1.02614 0.96804 0.96918 1.21102 0.95129 0.98129 0.93455 1.20338 1.02432 0.93139 0.98209 1.25053 0.86270 1.10996 0.95462 1.86520 1.22425 1.60794 1.64629 0.94725 0.84924 0.76238 0.85103 1.21021 0.93324 0.98299 0.92296 1.23525 0.98484 1.00090 0.96376 0.91789 0.87939 0.91790 0.87239 0.87252 0.90320 0.87971 0.76295 0.83215 0.84102 0.86463 0.77104 1.17637 1.17999 0.84349 0.88811 0.90500 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 101.05 1.07 1.05 16 2 O -0.36 -0.42 10.57 -39.26 -0.41 -0.84 16 3 C 0.46 0.58 7.96 36.00 0.29 0.87 16 4 O -0.50 -2.12 15.51 -18.75 -0.29 -2.41 16 5 C -0.11 0.23 5.65 -27.89 -0.16 0.07 16 6 C -0.10 0.18 3.03 -89.80 -0.27 -0.09 16 7 H 0.10 -0.07 7.68 -51.93 -0.40 -0.47 16 8 C -0.14 0.39 7.39 -25.92 -0.19 0.20 16 9 C 0.12 -0.03 4.32 -67.12 -0.29 -0.32 16 10 H 0.11 0.14 7.46 -51.93 -0.39 -0.25 16 11 N -0.71 -0.15 5.21 -54.01 -0.28 -0.43 16 12 C 0.56 1.85 7.77 -12.40 -0.10 1.76 16 13 O -0.52 -3.77 14.94 5.31 0.08 -3.69 16 14 C -0.17 -0.28 5.88 -104.91 -0.62 -0.90 16 15 C 0.17 0.37 7.29 -38.96 -0.28 0.09 16 16 F -0.11 -0.55 15.55 2.25 0.04 -0.52 16 17 C -0.16 0.12 10.01 -39.56 -0.40 -0.28 16 18 C -0.06 0.13 8.66 -39.51 -0.34 -0.21 16 19 C -0.14 0.24 5.39 -104.68 -0.56 -0.32 16 20 C -0.07 0.15 2.82 36.01 0.10 0.25 16 21 O -0.54 0.87 12.76 -35.23 -0.45 0.42 16 22 Si 0.69 -1.90 29.78 -169.99 -5.06 -6.96 16 23 C -0.03 0.03 9.09 -39.19 -0.36 -0.33 16 24 C -0.15 0.05 7.43 -25.92 -0.19 -0.14 16 25 H 0.06 -0.02 8.14 -51.92 -0.42 -0.45 16 26 H 0.10 -0.29 8.14 -51.93 -0.42 -0.72 16 27 H 0.06 -0.03 8.13 -51.93 -0.42 -0.45 16 28 H 0.11 -0.39 7.84 -51.93 -0.41 -0.80 16 29 H 0.11 -0.42 8.14 -51.93 -0.42 -0.84 16 30 H 0.08 -0.25 8.14 -51.93 -0.42 -0.68 16 31 H 0.10 -0.41 8.10 -51.93 -0.42 -0.83 16 32 H 0.40 -0.82 6.73 -40.82 -0.27 -1.10 16 33 H 0.15 -0.40 8.06 -52.49 -0.42 -0.83 16 34 H 0.14 -0.62 4.86 -52.49 -0.25 -0.88 16 35 H 0.12 -0.25 7.96 -51.93 -0.41 -0.66 16 36 H 0.38 -1.97 8.70 45.56 0.40 -1.57 16 37 H -0.25 -0.20 7.11 56.52 0.40 0.20 16 38 H -0.26 0.15 7.11 56.52 0.40 0.55 16 39 H 0.14 -0.35 6.40 -52.49 -0.34 -0.69 16 40 H 0.09 -0.12 7.90 -51.93 -0.41 -0.53 16 41 H 0.08 0.13 8.14 -51.93 -0.42 -0.29 16 LS Contribution 352.29 15.07 5.31 5.31 Total: 0.00 -10.27 352.29 -8.44 -18.72 By element: Atomic # 1 Polarization: -6.21 SS G_CDS: -5.06 Total: -11.28 kcal Atomic # 6 Polarization: 3.98 SS G_CDS: -2.30 Total: 1.68 kcal Atomic # 7 Polarization: -0.15 SS G_CDS: -0.28 Total: -0.43 kcal Atomic # 8 Polarization: -5.44 SS G_CDS: -1.08 Total: -6.51 kcal Atomic # 9 Polarization: -0.55 SS G_CDS: 0.04 Total: -0.52 kcal Atomic # 14 Polarization: -1.90 SS G_CDS: -5.06 Total: -6.96 kcal Total LS contribution 5.31 Total: 5.31 kcal Total: -10.27 -8.44 -18.72 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16627170_12335834.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -120.183 kcal (2) G-P(sol) polarization free energy of solvation -10.274 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -130.457 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.443 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.716 kcal (6) G-S(sol) free energy of system = (1) + (5) -138.899 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.54 seconds