Wall clock time and date at job start Sun Mar 7 2021 08:06:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45202 * 1 3 3 C 1.34234 * 116.99730 * 2 1 4 4 O 1.20817 * 120.00037 * 359.97438 * 3 2 1 5 5 C 1.50702 * 119.99655 * 179.97438 * 3 2 1 6 6 C 1.53001 * 109.46871 * 179.97438 * 5 3 2 7 7 H 1.09001 * 112.84731 * 43.80371 * 6 5 3 8 8 C 1.53781 * 113.61468 * 175.00404 * 6 5 3 9 9 C 1.53780 * 87.08080 * 139.98315 * 8 6 5 10 10 H 1.09003 * 113.61133 * 219.93591 * 9 8 6 11 11 N 1.46495 * 113.61773 * 89.11942 * 9 8 6 12 12 C 1.34773 * 120.00273 * 154.99841 * 11 9 8 13 13 O 1.21590 * 120.00034 * 359.97438 * 12 11 9 14 14 C 1.47581 * 119.99880 * 179.97438 * 12 11 9 15 15 C 1.40197 * 119.83374 * 359.97438 * 14 12 11 16 16 C 1.36240 * 120.37781 * 180.02562 * 15 14 12 17 17 C 1.39875 * 119.95684 * 359.97438 * 16 15 14 18 18 C 1.46261 * 133.83766 * 180.29223 * 17 16 15 19 19 C 1.50700 * 126.48295 * 0.02640 * 18 17 16 20 20 O 1.42905 * 109.46763 * 75.15317 * 19 18 17 21 21 Si 1.86301 * 109.47140 * 195.15239 * 19 18 17 22 22 C 1.34451 * 107.03592 * 180.13881 * 18 17 16 23 23 N 1.36566 * 109.98356 * 359.59308 * 22 18 17 24 24 C 1.37832 * 109.86238 * 0.26550 * 23 22 18 25 25 C 1.38643 * 133.38270 * 179.97438 * 24 23 22 26 26 C 1.53779 * 87.08393 * 334.56474 * 9 8 6 27 27 H 1.08996 * 109.46823 * 300.00108 * 1 2 3 28 28 H 1.08998 * 109.47284 * 60.00062 * 1 2 3 29 29 H 1.09004 * 109.47072 * 180.02562 * 1 2 3 30 30 H 1.09004 * 109.46825 * 60.00575 * 5 3 2 31 31 H 1.08994 * 109.47517 * 299.99781 * 5 3 2 32 32 H 1.09002 * 113.61504 * 25.43063 * 8 6 5 33 33 H 1.09008 * 113.68680 * 254.54026 * 8 6 5 34 34 H 0.96998 * 119.99896 * 334.99112 * 11 9 8 35 35 H 1.07997 * 119.80955 * 0.04324 * 15 14 12 36 36 H 1.07994 * 120.01663 * 179.97438 * 16 15 14 37 37 H 1.08997 * 109.47162 * 315.16003 * 19 18 17 38 38 H 0.96700 * 114.00099 * 60.00724 * 20 19 18 39 39 H 1.48499 * 109.99643 * 58.68718 * 21 19 18 40 40 H 1.48500 * 109.99892 * 180.02562 * 21 19 18 41 41 H 1.08002 * 125.01117 * 179.86391 * 22 18 17 42 42 H 0.97000 * 125.06855 * 180.24767 * 23 22 18 43 43 H 1.08000 * 120.16680 * 0.05088 * 25 24 23 44 44 H 1.08998 * 113.61451 * 139.98364 * 26 9 8 45 45 H 1.09004 * 113.61526 * 270.88907 * 26 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1961 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5663 1.2749 0.0006 6 6 4.0001 2.7421 -0.0002 7 1 3.4246 3.3540 0.6945 8 6 5.5208 2.9350 0.1230 9 6 5.3817 4.0667 -0.9088 10 1 6.1888 4.0916 -1.6410 11 7 5.1159 5.3772 -0.3104 12 6 5.4581 6.5013 -0.9704 13 8 5.9879 6.4278 -2.0624 14 6 5.1898 7.8215 -0.3677 15 6 4.5783 7.9021 0.8913 16 6 4.3250 9.1150 1.4578 17 6 4.6763 10.2884 0.7823 18 6 4.5564 11.7121 1.0954 19 6 3.9664 12.3076 2.3477 20 8 4.8883 12.1532 3.4286 21 14 3.6278 14.1190 2.0741 22 6 5.0701 12.3891 0.0535 23 7 5.5168 11.5154 -0.8963 24 6 5.2918 10.2197 -0.4836 25 6 5.5458 8.9813 -1.0527 26 6 4.1164 3.3495 -1.4083 27 1 -0.3633 0.5138 0.8900 28 1 -0.3634 0.5138 -0.8900 29 1 -0.3633 -1.0277 0.0005 30 1 3.9564 0.7807 -0.8892 31 1 3.9557 0.7811 0.8908 32 1 6.0994 2.0844 -0.2371 33 1 5.8404 3.2782 1.1071 34 1 4.6935 5.4358 0.5608 35 1 4.3068 6.9976 1.4152 36 1 3.8534 9.1704 2.4277 37 1 3.0346 11.7961 2.5890 38 1 5.7415 12.5842 3.2824 39 1 2.6950 14.2944 0.9320 40 1 3.0461 14.7181 3.3021 41 1 5.1255 13.4652 -0.0195 42 1 5.9304 11.7689 -1.7363 43 1 6.0174 8.9160 -2.0221 44 1 3.3009 4.0274 -1.6602 45 1 4.3111 2.6121 -2.1871 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16627170_12335838.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:06:48 Heat of formation + Delta-G solvation = -64.006444 kcal Electronic energy + Delta-G solvation = -28988.615191 eV Core-core repulsion = 24746.178516 eV Total energy + Delta-G solvation = -4242.436675 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.145 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -42.46602 -41.69872 -40.98683 -39.48807 -37.83896 -37.44457 -37.33486 -34.63155 -33.23177 -31.78674 -30.69344 -30.34401 -28.43659 -26.77106 -26.52754 -25.38002 -24.01032 -23.59971 -21.83936 -21.58186 -20.80556 -20.23154 -19.41022 -18.55433 -18.33249 -17.67393 -17.58429 -17.48112 -17.03297 -16.90731 -16.23755 -16.03267 -15.90167 -15.57978 -15.35233 -15.21481 -15.05418 -14.79115 -14.69930 -14.67350 -14.32304 -14.05759 -13.99388 -13.66162 -13.40898 -13.11070 -12.99217 -12.80955 -12.56131 -12.29570 -12.21729 -12.15831 -11.90351 -11.76260 -11.66679 -11.33737 -11.28381 -10.88651 -10.72974 -10.34254 -10.02742 -9.32994 -8.79129 -5.09475 -0.23646 0.42325 1.25443 1.29622 1.38777 1.63073 1.74969 1.89044 1.98009 2.03908 2.23757 2.95962 3.37092 3.41050 3.56124 3.60065 3.66780 3.74481 3.77938 3.81905 3.88393 3.89041 4.12982 4.17713 4.24254 4.29846 4.33733 4.35683 4.43896 4.45048 4.51237 4.57980 4.60332 4.65740 4.67953 4.74676 4.83296 5.00390 5.02381 5.06305 5.15585 5.26757 5.44662 5.46225 5.48773 5.62337 5.63392 6.00945 6.38087 6.52989 6.66250 6.78435 7.27589 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.363 6.363 3 C 0.458 3.542 4 O -0.504 6.504 5 C -0.105 4.105 6 C -0.103 4.103 7 H 0.102 0.898 8 C -0.140 4.140 9 C 0.121 3.879 10 H 0.107 0.893 11 N -0.708 5.708 12 C 0.567 3.433 13 O -0.537 6.537 14 C -0.121 4.121 15 C -0.113 4.113 16 C -0.073 4.073 17 C -0.063 4.063 18 C -0.211 4.211 19 C -0.030 4.030 20 O -0.542 6.542 21 Si 0.685 3.315 22 C 0.077 3.923 23 N -0.584 5.584 24 C 0.081 3.919 25 C -0.056 4.056 26 C -0.147 4.147 27 H 0.063 0.937 28 H 0.063 0.937 29 H 0.102 0.898 30 H 0.109 0.891 31 H 0.109 0.891 32 H 0.101 0.899 33 H 0.079 0.921 34 H 0.402 0.598 35 H 0.125 0.875 36 H 0.130 0.870 37 H 0.111 0.889 38 H 0.377 0.623 39 H -0.256 1.256 40 H -0.255 1.255 41 H 0.179 0.821 42 H 0.422 0.578 43 H 0.136 0.864 44 H 0.076 0.924 45 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.215 0.448 1.136 2.530 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.279 6.279 3 C 0.301 3.699 4 O -0.392 6.392 5 C -0.143 4.143 6 C -0.122 4.122 7 H 0.120 0.880 8 C -0.178 4.178 9 C 0.015 3.985 10 H 0.125 0.875 11 N -0.360 5.360 12 C 0.355 3.645 13 O -0.415 6.415 14 C -0.126 4.126 15 C -0.133 4.133 16 C -0.091 4.091 17 C -0.068 4.068 18 C -0.219 4.219 19 C -0.141 4.141 20 O -0.347 6.347 21 Si 0.586 3.414 22 C -0.052 4.052 23 N -0.186 5.186 24 C -0.025 4.025 25 C -0.077 4.077 26 C -0.186 4.186 27 H 0.082 0.918 28 H 0.082 0.918 29 H 0.121 0.879 30 H 0.127 0.873 31 H 0.128 0.872 32 H 0.119 0.881 33 H 0.097 0.903 34 H 0.238 0.762 35 H 0.143 0.857 36 H 0.148 0.852 37 H 0.128 0.872 38 H 0.224 0.776 39 H -0.181 1.181 40 H -0.179 1.179 41 H 0.196 0.804 42 H 0.260 0.740 43 H 0.154 0.846 44 H 0.094 0.906 45 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges 1.308 1.037 0.465 1.733 hybrid contribution -0.601 -0.474 -0.018 0.766 sum 0.707 0.563 0.447 1.008 Atomic orbital electron populations 1.23293 0.76009 1.03911 1.02661 1.86512 1.23740 1.33587 1.84081 1.23858 0.92347 0.81359 0.72314 1.90686 1.67258 1.36328 1.44896 1.21456 0.87486 0.99154 1.06156 1.22538 0.96352 0.93972 0.99290 0.87989 1.23409 0.95569 0.98633 1.00151 1.21792 0.98643 0.81514 0.96503 0.87471 1.45546 1.62894 1.04933 1.22626 1.18143 0.77686 0.83989 0.84662 1.90790 1.42869 1.87422 1.20377 1.19407 1.04746 0.92268 0.96139 1.20687 1.00107 0.97938 0.94523 1.20201 0.99147 0.90169 0.99609 1.19177 1.00832 0.93156 0.93665 1.20729 1.10909 0.91803 0.98443 1.24334 0.94618 1.10256 0.84931 1.86508 1.28149 1.79652 1.40379 0.95285 0.88271 0.76815 0.80988 1.21744 0.98942 0.95539 0.88941 1.41717 1.53480 1.03853 1.19575 1.18070 1.03306 0.85426 0.95698 1.20072 0.99516 0.88097 1.00031 1.23527 0.98615 1.00097 0.96316 0.91813 0.91803 0.87931 0.87268 0.87241 0.88072 0.90256 0.76202 0.85684 0.85223 0.87153 0.77591 1.18095 1.17904 0.80441 0.74003 0.84590 0.90553 0.88912 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 10.56 101.05 1.07 1.05 16 2 O -0.36 -0.49 10.57 -39.27 -0.41 -0.91 16 3 C 0.46 0.68 7.96 36.01 0.29 0.97 16 4 O -0.50 -2.26 15.50 -18.74 -0.29 -2.55 16 5 C -0.11 0.21 5.65 -27.88 -0.16 0.05 16 6 C -0.10 0.15 3.03 -89.80 -0.27 -0.12 16 7 H 0.10 -0.05 7.68 -51.93 -0.40 -0.45 16 8 C -0.14 0.36 7.39 -25.92 -0.19 0.17 16 9 C 0.12 0.00 4.32 -67.12 -0.29 -0.29 16 10 H 0.11 0.15 7.46 -51.93 -0.39 -0.24 16 11 N -0.71 -0.43 5.21 -54.05 -0.28 -0.71 16 12 C 0.57 1.96 7.76 -12.45 -0.10 1.86 16 13 O -0.54 -3.67 15.91 5.29 0.08 -3.58 16 14 C -0.12 -0.30 5.87 -104.95 -0.62 -0.92 16 15 C -0.11 -0.11 9.46 -39.57 -0.37 -0.48 16 16 C -0.07 -0.12 10.03 -39.69 -0.40 -0.51 16 17 C -0.06 -0.13 6.35 -105.04 -0.67 -0.80 16 18 C -0.21 -0.05 5.57 -102.74 -0.57 -0.62 16 19 C -0.03 0.01 3.06 36.01 0.11 0.12 16 20 O -0.54 -0.15 12.88 -35.23 -0.45 -0.60 16 21 Si 0.68 -1.23 30.75 -169.99 -5.23 -6.46 16 22 C 0.08 -0.14 10.43 -16.78 -0.17 -0.32 16 23 N -0.58 0.70 6.07 -10.68 -0.06 0.63 16 24 C 0.08 0.13 7.26 -84.00 -0.61 -0.48 16 25 C -0.06 -0.14 9.61 -39.03 -0.37 -0.51 16 26 C -0.15 0.02 7.43 -25.92 -0.19 -0.18 16 27 H 0.06 -0.02 8.13 -51.93 -0.42 -0.44 16 28 H 0.06 -0.01 8.13 -51.93 -0.42 -0.43 16 29 H 0.10 -0.28 8.14 -51.93 -0.42 -0.70 16 30 H 0.11 -0.37 7.84 -51.93 -0.41 -0.78 16 31 H 0.11 -0.40 8.14 -51.93 -0.42 -0.83 16 32 H 0.10 -0.38 8.10 -51.93 -0.42 -0.81 16 33 H 0.08 -0.24 8.14 -51.92 -0.42 -0.66 16 34 H 0.40 -0.61 6.69 -40.82 -0.27 -0.88 16 35 H 0.13 -0.21 6.36 -52.49 -0.33 -0.54 16 36 H 0.13 0.07 8.06 -52.49 -0.42 -0.36 16 37 H 0.11 0.06 7.96 -51.93 -0.41 -0.36 16 38 H 0.38 -1.37 8.70 45.56 0.40 -0.98 16 39 H -0.26 -0.19 7.11 56.52 0.40 0.21 16 40 H -0.25 -0.45 7.11 56.52 0.40 -0.05 16 41 H 0.18 -1.00 6.35 -52.49 -0.33 -1.33 16 42 H 0.42 -1.67 8.96 -40.82 -0.37 -2.04 16 43 H 0.14 0.30 7.62 -52.49 -0.40 -0.10 16 44 H 0.08 0.16 8.14 -51.93 -0.42 -0.27 16 45 H 0.09 -0.10 7.90 -51.93 -0.41 -0.51 16 LS Contribution 381.35 15.07 5.75 5.75 Total: 0.00 -11.65 381.35 -10.33 -21.98 By element: Atomic # 1 Polarization: -6.64 SS G_CDS: -5.90 Total: -12.54 kcal Atomic # 6 Polarization: 2.51 SS G_CDS: -3.53 Total: -1.01 kcal Atomic # 7 Polarization: 0.27 SS G_CDS: -0.35 Total: -0.08 kcal Atomic # 8 Polarization: -6.56 SS G_CDS: -1.08 Total: -7.64 kcal Atomic # 14 Polarization: -1.23 SS G_CDS: -5.23 Total: -6.46 kcal Total LS contribution 5.75 Total: 5.75 kcal Total: -11.65 -10.33 -21.98 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16627170_12335838.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -42.029 kcal (2) G-P(sol) polarization free energy of solvation -11.647 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -53.676 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.330 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.977 kcal (6) G-S(sol) free energy of system = (1) + (5) -64.006 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds